RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 HLCSP50747 726 aa17.15■□□□□ 0.34
UPK3BP1-201ENST00000428678 MLF1P58340 268 aa17.15■□□□□ 0.34
UPK3BP1-201ENST00000428678 OLR1P78380 273 aa17.15■□□□□ 0.34
UPK3BP1-201ENST00000428678 DHX34Q14147 1143 aaKnown RBP17.15■□□□□ 0.34
UPK3BP1-201ENST00000428678 MBOAT1Q6ZNC8 495 aa17.15■□□□□ 0.34
UPK3BP1-201ENST00000428678 TMEM200AQ86VY9 491 aa17.15■□□□□ 0.34
UPK3BP1-201ENST00000428678 MARVELD2Q8N4S9 558 aa17.15■□□□□ 0.34
UPK3BP1-201ENST00000428678 MFSD9Q8NBP5 474 aa17.15■□□□□ 0.34
UPK3BP1-201ENST00000428678 ZNF669Q96BR6 464 aaPredicted RBP17.15■□□□□ 0.34
UPK3BP1-201ENST00000428678 POM121Q96HA1 1249 aa17.15■□□□□ 0.34
UPK3BP1-201ENST00000428678 ATG10Q9H0Y0 220 aa17.15■□□□□ 0.34
UPK3BP1-201ENST00000428678 NPDC1Q9NQX5 325 aaPredicted RBP17.15■□□□□ 0.34
UPK3BP1-201ENST00000428678 FCHO1O14526 889 aa17.14■□□□□ 0.33
UPK3BP1-201ENST00000428678 NDUFS4O43181 175 aa17.14■□□□□ 0.33
UPK3BP1-201ENST00000428678 CHST10O43529 356 aa17.14■□□□□ 0.33
UPK3BP1-201ENST00000428678 SERPIND1P05546 499 aa17.14■□□□□ 0.33
UPK3BP1-201ENST00000428678 CHRNB4P30926 498 aa17.14■□□□□ 0.33
UPK3BP1-201ENST00000428678 KCNJ1P48048 391 aa17.14■□□□□ 0.33
UPK3BP1-201ENST00000428678 SARNPP82979 210 aaKnown RBP17.14■□□□□ 0.33
UPK3BP1-201ENST00000428678 NAE1Q13564 534 aa17.14■□□□□ 0.33
UPK3BP1-201ENST00000428678 DEFB134Q4QY38 66 aa17.14■□□□□ 0.33
UPK3BP1-201ENST00000428678 TMEM211Q6ICI0 200 aa17.14■□□□□ 0.33
UPK3BP1-201ENST00000428678 DRICH1Q6PGQ1 229 aaPredicted RBP17.14■□□□□ 0.33
UPK3BP1-201ENST00000428678 AGTRAPQ6RW13 159 aa17.14■□□□□ 0.33
UPK3BP1-201ENST00000428678 AFAP1L2Q8N4X5 818 aa17.14■□□□□ 0.33
UPK3BP1-201ENST00000428678 RNF10Q8N5U6 811 aaKnown RBP17.14■□□□□ 0.33
UPK3BP1-201ENST00000428678 ZNF740Q8NDX6 193 aa17.14■□□□□ 0.33
UPK3BP1-201ENST00000428678 PTCHD1Q96NR3 888 aa17.14■□□□□ 0.33
UPK3BP1-201ENST00000428678 DEFB126Q9BYW3 111 aa17.14■□□□□ 0.33
UPK3BP1-201ENST00000428678 UCK2Q9BZX2 261 aa17.14■□□□□ 0.33
UPK3BP1-201ENST00000428678 TRIM45Q9H8W5 580 aaPredicted RBP17.14■□□□□ 0.33
UPK3BP1-201ENST00000428678 RNF6Q9Y252 685 aa17.14■□□□□ 0.33
UPK3BP1-201ENST00000428678 SAGE2PA6NJ88 616 aa17.13■□□□□ 0.33
UPK3BP1-201ENST00000428678 USP27XA6NNY8 438 aa17.13■□□□□ 0.33
UPK3BP1-201ENST00000428678 KLRC4-KLRK1H3BQV0 150 aa17.13■□□□□ 0.33
UPK3BP1-201ENST00000428678 HS6ST1O60243 411 aa17.13■□□□□ 0.33
UPK3BP1-201ENST00000428678 PRMT3O60678 531 aa17.13■□□□□ 0.33
UPK3BP1-201ENST00000428678 GALR3O60755 368 aaPredicted RBP17.13■□□□□ 0.33
UPK3BP1-201ENST00000428678 DNAJB6O75190 326 aa17.13■□□□□ 0.33
UPK3BP1-201ENST00000428678 B3GALT4O96024 378 aa17.13■□□□□ 0.33
UPK3BP1-201ENST00000428678 ALOX12P18054 663 aa17.13■□□□□ 0.33
UPK3BP1-201ENST00000428678 TFEBP19484 476 aa17.13■□□□□ 0.33
UPK3BP1-201ENST00000428678 TRHRP34981 398 aaPredicted RBP17.13■□□□□ 0.33
UPK3BP1-201ENST00000428678 SLC1A2P43004 574 aa17.13■□□□□ 0.33
UPK3BP1-201ENST00000428678 VPS41P49754 854 aa17.13■□□□□ 0.33
UPK3BP1-201ENST00000428678 SKP1P63208 163 aa17.13■□□□□ 0.33
UPK3BP1-201ENST00000428678 MEF2AQ02078 507 aaPredicted RBP17.13■□□□□ 0.33
UPK3BP1-201ENST00000428678 TRIP13Q15645 432 aaPredicted RBP17.13■□□□□ 0.33
UPK3BP1-201ENST00000428678 CMPK2Q5EBM0 449 aa17.13■□□□□ 0.33
UPK3BP1-201ENST00000428678 TMEM139Q8IV31 216 aa17.13■□□□□ 0.33
UPK3BP1-201ENST00000428678 SULF2Q8IWU5 870 aa17.13■□□□□ 0.33
UPK3BP1-201ENST00000428678 LILRB4Q8NHJ6 448 aa17.13■□□□□ 0.33
UPK3BP1-201ENST00000428678 RND1Q92730 232 aa17.13■□□□□ 0.33
UPK3BP1-201ENST00000428678 ZNF559Q9BR84 538 aa17.13■□□□□ 0.33
UPK3BP1-201ENST00000428678 TNFRSF10DQ9UBN6 386 aa17.13■□□□□ 0.33
UPK3BP1-201ENST00000428678 ADAMTS6Q9UKP5 1117 aa17.13■□□□□ 0.33
UPK3BP1-201ENST00000428678 PDE10AQ9Y233 779 aa17.13■□□□□ 0.33
UPK3BP1-201ENST00000428678 HRH3Q9Y5N1 445 aa17.13■□□□□ 0.33
UPK3BP1-201ENST00000428678 PRRC2AP48634 2157 aaKnown RBP17.13■□□□□ 0.33
UPK3BP1-201ENST00000428678 A8MUA0 341 aa17.12■□□□□ 0.33
UPK3BP1-201ENST00000428678 EIF3FO00303 357 aaPredicted RBP17.12■□□□□ 0.33
UPK3BP1-201ENST00000428678 OR1F1O43749 312 aa17.12■□□□□ 0.33
UPK3BP1-201ENST00000428678 PEX1O43933 1283 aa17.12■□□□□ 0.33
UPK3BP1-201ENST00000428678 CEP104O60308 925 aa17.12■□□□□ 0.33
UPK3BP1-201ENST00000428678 MAOAP21397 527 aa17.12■□□□□ 0.33
UPK3BP1-201ENST00000428678 CCND1P24385 295 aa17.12■□□□□ 0.33
UPK3BP1-201ENST00000428678 CCR8P51685 355 aa17.12■□□□□ 0.33
UPK3BP1-201ENST00000428678 BTG2P78543 158 aa17.12■□□□□ 0.33
UPK3BP1-201ENST00000428678 ARMC3Q5W041 872 aa17.12■□□□□ 0.33
UPK3BP1-201ENST00000428678 PALM2Q8IXS6 379 aa17.12■□□□□ 0.33
UPK3BP1-201ENST00000428678 SGPP1Q9BX95 441 aa17.12■□□□□ 0.33
UPK3BP1-201ENST00000428678 TP63Q9H3D4 680 aaPredicted RBP17.12■□□□□ 0.33
UPK3BP1-201ENST00000428678 PARVBQ9HBI1 364 aa17.12■□□□□ 0.33
UPK3BP1-201ENST00000428678 KCNJ16Q9NPI9 418 aa17.12■□□□□ 0.33
UPK3BP1-201ENST00000428678 TRMT6Q9UJA5 497 aaKnown RBP17.12■□□□□ 0.33
UPK3BP1-201ENST00000428678 GUCA1BQ9UMX6 200 aa17.12■□□□□ 0.33
UPK3BP1-201ENST00000428678 COMMD10Q9Y6G5 202 aa17.12■□□□□ 0.33
UPK3BP1-201ENST00000428678 ABCA2Q9BZC7 2435 aa17.11■□□□□ 0.33
UPK3BP1-201ENST00000428678 PHF3Q92576 2039 aaKnown RBP17.11■□□□□ 0.33
UPK3BP1-201ENST00000428678 FAM237BA0A1B0GVD1 139 aa17.11■□□□□ 0.33
UPK3BP1-201ENST00000428678 PDE9AO76083 593 aa17.11■□□□□ 0.33
UPK3BP1-201ENST00000428678 TOXO94900 526 aa17.11■□□□□ 0.33
UPK3BP1-201ENST00000428678 C8GP07360 202 aa17.11■□□□□ 0.33
UPK3BP1-201ENST00000428678 ZNF888P0CJ79 500 aaPredicted RBP17.11■□□□□ 0.33
UPK3BP1-201ENST00000428678 MSX1P28360 303 aa17.11■□□□□ 0.33
UPK3BP1-201ENST00000428678 GPR85P60893 370 aa17.11■□□□□ 0.33
UPK3BP1-201ENST00000428678 TFF3Q07654 80 aa17.11■□□□□ 0.33
UPK3BP1-201ENST00000428678 ARHGAP11AQ6P4F7 1023 aa17.11■□□□□ 0.33
UPK3BP1-201ENST00000428678 LCTLQ6UWM7 567 aa17.11■□□□□ 0.33
UPK3BP1-201ENST00000428678 QSOX2Q6ZRP7 698 aa17.11■□□□□ 0.33
UPK3BP1-201ENST00000428678 CAND1Q86VP6 1230 aaKnown RBP17.11■□□□□ 0.33
UPK3BP1-201ENST00000428678 CCDC71Q8IV32 467 aaPredicted RBP17.11■□□□□ 0.33
UPK3BP1-201ENST00000428678 DMRTC2Q8IXT2 367 aaPredicted RBP17.11■□□□□ 0.33
UPK3BP1-201ENST00000428678 CYP4Z2PQ8N1L4 340 aa17.11■□□□□ 0.33
UPK3BP1-201ENST00000428678 RPRMLQ8N4K4 120 aa17.11■□□□□ 0.33
UPK3BP1-201ENST00000428678 EEF1AKMT1Q8WVE0 214 aa17.11■□□□□ 0.33
UPK3BP1-201ENST00000428678 HAUS8Q9BT25 410 aa17.11■□□□□ 0.33
UPK3BP1-201ENST00000428678 C20orf96Q9NUD7 363 aaPredicted RBP17.11■□□□□ 0.33
UPK3BP1-201ENST00000428678 ZKSCAN5Q9Y2L8 839 aa17.11■□□□□ 0.33
UPK3BP1-201ENST00000428678 FLNAP21333 2647 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms