RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 FTHL17Q9BXU8 183 aa4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 FKRPQ9H9S5 495 aa4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 UBTD1Q9HAC8 227 aa4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 HOMER3Q9NSC5 361 aa4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 DCAF16Q9NXF7 216 aa4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 VDAC3Q9Y277 283 aa4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 FRMPD1Q5SYB0 1578 aa4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 CD109Q6YHK3 1445 aa4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 CLRN2A0PK11 232 aa4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 M0R296 226 aa4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 PSMD3O43242 534 aa4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 ACSL4O60488 711 aa4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 GRAP2O75791 330 aa4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 PMS2P2O95744 297 aa4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 OPN1MWP04001 364 aa4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 OPN1MW2P0DN77 364 aa4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 OPN1MW3P0DN78 364 aa4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 CD59P13987 128 aa4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 SFTPDP35247 375 aa4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 IFNAR2P48551 515 aa4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 SSBP2P81877 361 aaPredicted RBP4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 TRAF3Q13114 568 aa4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 TRIM29Q14134 588 aa4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 TWIST1Q15672 202 aa4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 ZC2HC1CQ53FD0 456 aaPredicted RBP4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 PIWIL4Q7Z3Z4 852 aaKnown RBP4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 TECPR1Q7Z6L1 1165 aa4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 AMZ2Q86W34 360 aa4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 PRIMA1Q86XR5 153 aa4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 ZNF444Q8N0Y2 327 aaPredicted RBP4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 MUC20Q8N307 709 aaPredicted RBP4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 CLIP4Q8N3C7 705 aa4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 KCNH5Q8NCM2 988 aa4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 OR4A16Q8NH70 328 aa4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 RTP3Q9BQQ7 232 aa4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 TRAF4Q9BUZ4 470 aaPredicted RBP4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 TRMT61BQ9BVS5 477 aaKnown RBP4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 SF3B5Q9BWJ5 86 aaKnown RBP4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 LRRC2Q9BYS8 371 aa4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 APOBEC3GQ9HC16 384 aaKnown RBP4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 CHST11Q9NPF2 352 aa4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 TMOD2Q9NZR1 351 aa4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 PLA2G4CQ9UP65 541 aa4.22□□□□□ -1.73
NUDCD1-202ENST00000427660 CLTCL1P53675 1640 aa4.21□□□□□ -1.73
NUDCD1-202ENST00000427660 PIK3C2GO75747 1445 aa4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 A0A087WZY1 265 aa4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 C2orf81A6NN90 581 aa4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 ZNF587BE7ETH6 402 aa4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 PROB1E7EW31 1015 aa4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 NUDT3O95989 172 aa4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 SERPINF2P08697 491 aa4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 HOXC6P09630 235 aa4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 FUT1P19526 365 aa4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 PKLRP30613 574 aa4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 PMP22Q01453 160 aa4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 RELQ04864 619 aaPredicted RBP4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 TAF10Q12962 218 aa4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 NFATC4Q14934 902 aa4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 EZH2Q15910 746 aaKnown RBP4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 C20orf194Q5TEA3 1177 aa4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 ZNF626Q68DY1 528 aa4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 FAM171BQ6P995 826 aa4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 CTR9Q6PD62 1173 aa4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 CORO6Q6QEF8 472 aa4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 TDHQ8IZJ6 230 aa4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 PHLDA1Q8WV24 401 aaPredicted RBP4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 RFT1Q96AA3 541 aa4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 ALKBH7Q9BT30 221 aaPredicted RBP4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 NMNAT2Q9BZQ4 307 aa4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 SPRTNQ9H040 489 aaPredicted RBP4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 RNF121Q9H920 327 aa4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 FGF21Q9NSA1 209 aa4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 CNOT2Q9NZN8 540 aaKnown RBP4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 MALT1Q9UDY8 824 aa4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 FAM153AQ9UHL3 310 aa4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 SLC12A6Q9UHW9 1150 aa4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 SLC7A7Q9UM01 511 aa4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 STUB1Q9UNE7 303 aa4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 DIP2CQ9Y2E4 1556 aa4.21□□□□□ -1.74
NUDCD1-202ENST00000427660 PPRC1Q5VV67 1664 aaKnown RBP4.2□□□□□ -1.74
NUDCD1-202ENST00000427660 ZNF804BA4D1E1 1349 aa4.2□□□□□ -1.74
NUDCD1-202ENST00000427660 ANKRD61A6NGH8 418 aa4.2□□□□□ -1.74
NUDCD1-202ENST00000427660 NME2P1O60361 137 aa4.2□□□□□ -1.74
NUDCD1-202ENST00000427660 CLN5O75503 358 aa4.2□□□□□ -1.74
NUDCD1-202ENST00000427660 SFTPBP07988 381 aa4.2□□□□□ -1.74
NUDCD1-202ENST00000427660 F3P13726 295 aa4.2□□□□□ -1.74
NUDCD1-202ENST00000427660 HLA-DOBP13765 273 aa4.2□□□□□ -1.74
NUDCD1-202ENST00000427660 MARCKSP29966 332 aaPredicted RBP4.2□□□□□ -1.74
NUDCD1-202ENST00000427660 CCKBRP32239 447 aa4.2□□□□□ -1.74
NUDCD1-202ENST00000427660 ACVRL1P37023 503 aa4.2□□□□□ -1.74
NUDCD1-202ENST00000427660 NUMBP49757 651 aa4.2□□□□□ -1.74
NUDCD1-202ENST00000427660 NR0B1P51843 470 aaKnown RBP4.2□□□□□ -1.74
NUDCD1-202ENST00000427660 PGGT1BP53609 377 aa4.2□□□□□ -1.74
NUDCD1-202ENST00000427660 MAZP56270 477 aaKnown RBP4.2□□□□□ -1.74
NUDCD1-202ENST00000427660 GIT2Q14161 759 aa4.2□□□□□ -1.74
NUDCD1-202ENST00000427660 STX1AQ16623 288 aa4.2□□□□□ -1.74
NUDCD1-202ENST00000427660 OR52N5Q8NH56 324 aa4.2□□□□□ -1.74
NUDCD1-202ENST00000427660 GRHL3Q8TE85 626 aa4.2□□□□□ -1.74
NUDCD1-202ENST00000427660 ARHGAP45Q92619 1136 aa4.2□□□□□ -1.74
NUDCD1-202ENST00000427660 WBP2Q969T9 261 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms