RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 PCSK5Q92824 1860 aa17.06■□□□□ 0.32
HERC3-205ENST00000426683 IDSB3KWA1 339 aa17.06■□□□□ 0.32
HERC3-205ENST00000426683 AGPSO00116 658 aa17.06■□□□□ 0.32
HERC3-205ENST00000426683 SOCS6O14544 535 aa17.06■□□□□ 0.32
HERC3-205ENST00000426683 CLEC3AO75596 197 aa17.06■□□□□ 0.32
HERC3-205ENST00000426683 WFS1O76024 890 aa17.06■□□□□ 0.32
HERC3-205ENST00000426683 BMP10O95393 424 aa17.06■□□□□ 0.32
HERC3-205ENST00000426683 HEXBP07686 556 aa17.06■□□□□ 0.32
HERC3-205ENST00000426683 CASP2P42575 452 aa17.06■□□□□ 0.32
HERC3-205ENST00000426683 STXBP1P61764 594 aaKnown RBP17.06■□□□□ 0.32
HERC3-205ENST00000426683 SKP1P63208 163 aa17.06■□□□□ 0.32
HERC3-205ENST00000426683 PCDH1Q08174 1060 aa17.06■□□□□ 0.32
HERC3-205ENST00000426683 NFATC3Q12968 1075 aa17.06■□□□□ 0.32
HERC3-205ENST00000426683 GTF2H2Q13888 395 aa17.06■□□□□ 0.32
HERC3-205ENST00000426683 E2F2Q14209 437 aa17.06■□□□□ 0.32
HERC3-205ENST00000426683 DCAF10Q5QP82 559 aa17.06■□□□□ 0.32
HERC3-205ENST00000426683 ADNP2Q6IQ32 1131 aa17.06■□□□□ 0.32
HERC3-205ENST00000426683 NIPAL1Q6NVV3 410 aa17.06■□□□□ 0.32
HERC3-205ENST00000426683 GTF2H2CQ6P1K8 395 aa17.06■□□□□ 0.32
HERC3-205ENST00000426683 KIRREL2Q6UWL6 708 aa17.06■□□□□ 0.32
HERC3-205ENST00000426683 VN1R5Q7Z5H4 357 aa17.06■□□□□ 0.32
HERC3-205ENST00000426683 OR5T3Q8NGG3 340 aa17.06■□□□□ 0.32
HERC3-205ENST00000426683 ACMSDQ8TDX5 336 aa17.06■□□□□ 0.32
HERC3-205ENST00000426683 EPS8L3Q8TE67 593 aaKnown RBP17.06■□□□□ 0.32
HERC3-205ENST00000426683 AENQ8WTP8 325 aaKnown RBP17.06■□□□□ 0.32
HERC3-205ENST00000426683 AICDAQ9GZX7 198 aa17.06■□□□□ 0.32
HERC3-205ENST00000426683 PPCSQ9HAB8 311 aa17.06■□□□□ 0.32
HERC3-205ENST00000426683 PRM3Q9NNZ6 103 aa17.06■□□□□ 0.32
HERC3-205ENST00000426683 ZNF71Q9NQZ8 489 aaPredicted RBP17.06■□□□□ 0.32
HERC3-205ENST00000426683 TMEM216Q9P0N5 145 aa17.06■□□□□ 0.32
HERC3-205ENST00000426683 FBXL4Q9UKA2 621 aa17.06■□□□□ 0.32
HERC3-205ENST00000426683 ATMQ13315 3056 aa17.05■□□□□ 0.32
HERC3-205ENST00000426683 CACNA1GO43497 2377 aa17.05■□□□□ 0.32
HERC3-205ENST00000426683 A0A1W2PPM1 405 aa17.05■□□□□ 0.32
HERC3-205ENST00000426683 A6NL46 340 aa17.05■□□□□ 0.32
HERC3-205ENST00000426683 STX16-NPEPL1H3BU86 382 aa17.05■□□□□ 0.32
HERC3-205ENST00000426683 MASP2O00187 686 aa17.05■□□□□ 0.32
HERC3-205ENST00000426683 E2F3O00716 465 aa17.05■□□□□ 0.32
HERC3-205ENST00000426683 STX16O14662 325 aa17.05■□□□□ 0.32
HERC3-205ENST00000426683 JRKO75564 520 aa17.05■□□□□ 0.32
HERC3-205ENST00000426683 SBK3P0C264 359 aa17.05■□□□□ 0.32
HERC3-205ENST00000426683 SMIM10L1P0DMW3 83 aa17.05■□□□□ 0.32
HERC3-205ENST00000426683 PYGBP11216 843 aa17.05■□□□□ 0.32
HERC3-205ENST00000426683 EEF1DP29692 281 aaKnown RBP17.05■□□□□ 0.32
HERC3-205ENST00000426683 XCR1P46094 333 aa17.05■□□□□ 0.32
HERC3-205ENST00000426683 PIK3CGP48736 1102 aa17.05■□□□□ 0.32
HERC3-205ENST00000426683 OLR1P78380 273 aa17.05■□□□□ 0.32
HERC3-205ENST00000426683 METTL2BQ6P1Q9 378 aaKnown RBP17.05■□□□□ 0.32
HERC3-205ENST00000426683 MED27Q6P2C8 311 aa17.05■□□□□ 0.32
HERC3-205ENST00000426683 EMBQ6PCB8 327 aa17.05■□□□□ 0.32
HERC3-205ENST00000426683 GOLGA7Q7Z5G4 137 aa17.05■□□□□ 0.32
HERC3-205ENST00000426683 LCA5Q86VQ0 697 aa17.05■□□□□ 0.32
HERC3-205ENST00000426683 TDRPQ86YL5 185 aa17.05■□□□□ 0.32
HERC3-205ENST00000426683 TMEM151AQ8N4L1 468 aa17.05■□□□□ 0.32
HERC3-205ENST00000426683 CLEC1AQ8NC01 280 aa17.05■□□□□ 0.32
HERC3-205ENST00000426683 UBE2E3Q969T4 207 aa17.05■□□□□ 0.32
HERC3-205ENST00000426683 SMIM10Q96HG1 83 aa17.05■□□□□ 0.32
HERC3-205ENST00000426683 VPS50Q96JG6 964 aa17.05■□□□□ 0.32
HERC3-205ENST00000426683 MESP1Q9BRJ9 268 aa17.05■□□□□ 0.32
HERC3-205ENST00000426683 SLC25A23Q9BV35 468 aa17.05■□□□□ 0.32
HERC3-205ENST00000426683 RHBGQ9H310 441 aa17.05■□□□□ 0.32
HERC3-205ENST00000426683 MKL2Q9ULH7 1088 aa17.05■□□□□ 0.32
HERC3-205ENST00000426683 TP53TG5Q9Y2B4 290 aa17.05■□□□□ 0.32
HERC3-205ENST00000426683 LRIT2A6NDA9 550 aa17.04■□□□□ 0.32
HERC3-205ENST00000426683 FOXO6A8MYZ6 492 aa17.04■□□□□ 0.32
HERC3-205ENST00000426683 C4orf51C9J302 202 aa17.04■□□□□ 0.32
HERC3-205ENST00000426683 DNAJB6O75190 326 aa17.04■□□□□ 0.32
HERC3-205ENST00000426683 PCNAP12004 261 aa17.04■□□□□ 0.32
HERC3-205ENST00000426683 KRT15P19012 456 aa17.04■□□□□ 0.32
HERC3-205ENST00000426683 NR1D1P20393 614 aa17.04■□□□□ 0.32
HERC3-205ENST00000426683 HNRNPH1P31943 449 aaKnown RBP17.04■□□□□ 0.32
HERC3-205ENST00000426683 C19orf57Q0VDD7 668 aa17.04■□□□□ 0.32
HERC3-205ENST00000426683 TUBB8Q3ZCM7 444 aa17.04■□□□□ 0.32
HERC3-205ENST00000426683 MINDY4Q4G0A6 757 aa17.04■□□□□ 0.32
HERC3-205ENST00000426683 LACTB2Q53H82 288 aaPredicted RBP17.04■□□□□ 0.32
HERC3-205ENST00000426683 MFSD4BQ5TF39 518 aa17.04■□□□□ 0.32
HERC3-205ENST00000426683 FAAH2Q6GMR7 532 aa17.04■□□□□ 0.32
HERC3-205ENST00000426683 GRHL2Q6ISB3 625 aa17.04■□□□□ 0.32
HERC3-205ENST00000426683 MYLK4Q86YV6 388 aaPredicted RBP17.04■□□□□ 0.32
HERC3-205ENST00000426683 CYP4X1Q8N118 509 aa17.04■□□□□ 0.32
HERC3-205ENST00000426683 OR11G2Q8NGC1 345 aa17.04■□□□□ 0.32
HERC3-205ENST00000426683 OR2W6PQ8NHA6 318 aa17.04■□□□□ 0.32
HERC3-205ENST00000426683 CAVIN3Q969G5 261 aa17.04■□□□□ 0.32
HERC3-205ENST00000426683 GAL3ST3Q96A11 431 aa17.04■□□□□ 0.32
HERC3-205ENST00000426683 C8orf44Q96CB5 159 aa17.04■□□□□ 0.32
HERC3-205ENST00000426683 MS4A6EQ96DS6 147 aa17.04■□□□□ 0.32
HERC3-205ENST00000426683 PEX11GQ96HA9 241 aa17.04■□□□□ 0.32
HERC3-205ENST00000426683 PARD6BQ9BYG5 372 aa17.04■□□□□ 0.32
HERC3-205ENST00000426683 RBCK1Q9BYM8 510 aa17.04■□□□□ 0.32
HERC3-205ENST00000426683 IPPKQ9H8X2 491 aa17.04■□□□□ 0.32
HERC3-205ENST00000426683 ACTR8Q9H981 624 aa17.04■□□□□ 0.32
HERC3-205ENST00000426683 ATP13A2Q9NQ11 1180 aa17.04■□□□□ 0.32
HERC3-205ENST00000426683 A8MT66 165 aa17.03■□□□□ 0.32
HERC3-205ENST00000426683 K7EM74 188 aa17.03■□□□□ 0.32
HERC3-205ENST00000426683 ERI3O43414 337 aaKnown RBP17.03■□□□□ 0.32
HERC3-205ENST00000426683 CHST10O43529 356 aa17.03■□□□□ 0.32
HERC3-205ENST00000426683 ALOX12BO75342 701 aa17.03■□□□□ 0.32
HERC3-205ENST00000426683 CEACAM4O75871 244 aa17.03■□□□□ 0.32
HERC3-205ENST00000426683 TBX6O95947 436 aaPredicted RBP17.03■□□□□ 0.32
HERC3-205ENST00000426683 ACPPP15309 386 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms