RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 GPR45Q9Y5Y3 372 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 PTGDR2Q9Y5Y4 395 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 CAPN7Q9Y6W3 813 aa9.87□□□□□ -0.83
MDC1-205ENST00000425072 GVINP1Q7Z2Y8 2422 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 LY6G6EA0A0G2JKS1 128 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 GNG14A0A1W2PPG7 69 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 H0YGG7 62 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 TMX2-CTNND1H3BSU7 103 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 ANXA4P09525 319 aaPredicted RBP9.86□□□□□ -0.83
MDC1-205ENST00000425072 ESRRAP11474 423 aaPredicted RBP9.86□□□□□ -0.83
MDC1-205ENST00000425072 MYF5P13349 255 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 CD59P13987 128 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 ST6GAL1P15907 406 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 PRPS1L1P21108 318 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 RPL3P39023 403 aaKnown RBP9.86□□□□□ -0.83
MDC1-205ENST00000425072 LSSP48449 732 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 CLDN8P56748 225 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 ARF3P61204 181 aaPredicted RBP9.86□□□□□ -0.83
MDC1-205ENST00000425072 TRA2BP62995 288 aaKnown RBP9.86□□□□□ -0.83
MDC1-205ENST00000425072 RPL38P63173 70 aaKnown RBP9.86□□□□□ -0.83
MDC1-205ENST00000425072 SKP1P63208 163 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 TBL3Q12788 808 aaKnown RBP9.86□□□□□ -0.83
MDC1-205ENST00000425072 TRA2AQ13595 282 aaKnown RBP eCLIP9.86□□□□□ -0.83
MDC1-205ENST00000425072 CYLC2Q14093 348 aaPredicted RBP9.86□□□□□ -0.83
MDC1-205ENST00000425072 NDUFA9Q16795 377 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 FAM214AQ32MH5 1076 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 ADPRMQ3LIE5 342 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 AASDHQ4L235 1098 aaPredicted RBP9.86□□□□□ -0.83
MDC1-205ENST00000425072 PDCD4Q53EL6 469 aaKnown RBP9.86□□□□□ -0.83
MDC1-205ENST00000425072 AGKQ53H12 422 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 CCNYL2Q5T2Q4 361 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 TMEM198Q66K66 360 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 OR4C11Q6IEV9 310 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 TRIM40Q6P9F5 258 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 CYB5D1Q6P9G0 228 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 RNF44Q7L0R7 432 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 PRSS42Q7Z5A4 293 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 BPHLQ86WA6 291 aaPredicted RBP9.86□□□□□ -0.83
MDC1-205ENST00000425072 PLD3Q8IV08 490 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 C1orf52Q8N6N3 182 aaKnown RBP9.86□□□□□ -0.83
MDC1-205ENST00000425072 C19orf47Q8N9M1 422 aaKnown RBP9.86□□□□□ -0.83
MDC1-205ENST00000425072 OR2L5Q8NG80 312 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 KLHL6Q8WZ60 621 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 APIPQ96GX9 242 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 KCNC2Q96PR1 638 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 F2RL3Q96RI0 385 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 GFM1Q96RP9 751 aaKnown RBP9.86□□□□□ -0.83
MDC1-205ENST00000425072 EDEM2Q9BV94 578 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 DPY30Q9C005 99 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 BRINP2Q9C0B6 783 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 MCM8Q9UJA3 840 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 METRNQ9UJH8 293 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 SERTAD3Q9UJW9 196 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 COPG1Q9Y678 874 aaKnown RBP9.86□□□□□ -0.83
MDC1-205ENST00000425072 U3KQA8 63 aa9.86□□□□□ -0.83
MDC1-205ENST00000425072 MAP1BP46821 2468 aaKnown RBP9.85□□□□□ -0.83
MDC1-205ENST00000425072 MN1Q10571 1320 aaPredicted RBP9.85□□□□□ -0.83
MDC1-205ENST00000425072 IGHV5-51A0A0C4DH38 117 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 C4orf47A7E2U8 309 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 CAPN14A8MX76 684 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 PROB1E7EW31 1015 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 NDUFS4O43181 175 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 CTSVO60911 334 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 EIF2S1P05198 315 aaKnown RBP9.85□□□□□ -0.83
MDC1-205ENST00000425072 IL6P05231 212 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 RPLP0P05388 317 aaKnown RBP9.85□□□□□ -0.83
MDC1-205ENST00000425072 SNRPB2P08579 225 aaKnown RBP9.85□□□□□ -0.83
MDC1-205ENST00000425072 ALDOCP09972 364 aaKnown RBP9.85□□□□□ -0.83
MDC1-205ENST00000425072 MSL3P1P0C860 447 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 G6PDP11413 515 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 BCKDHAP12694 445 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 PVRP15151 417 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 GPX3P22352 226 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 CALB2P22676 271 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 CLNS1AP54105 237 aaKnown RBP9.85□□□□□ -0.83
MDC1-205ENST00000425072 EMP3P54852 163 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 DIO3P55073 304 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 CYP4F2P78329 520 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 SRSF11Q05519 484 aaKnown RBP9.85□□□□□ -0.83
MDC1-205ENST00000425072 SLC9A5Q14940 896 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 HERC3Q15034 1050 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 PERM1Q5SV97 790 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 GARNL3Q5VVW2 1013 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 CYP20A1Q6UW02 462 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 PRR23CQ6ZRP0 262 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 ABHD13Q7L211 337 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 VN1R5Q7Z5H4 357 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 R3HCC1LQ7Z5L2 792 aaKnown RBP9.85□□□□□ -0.83
MDC1-205ENST00000425072 D2HGDHQ8N465 521 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 LIX1Q8N485 282 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 RNF175Q8N4F7 328 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 NATD1Q8N6N6 113 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 GAL3ST3Q96A11 431 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 MS4A6EQ96DS6 147 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 C11orf24Q96F05 449 aaPredicted RBP9.85□□□□□ -0.83
MDC1-205ENST00000425072 PRR11Q96HE9 360 aaPredicted RBP9.85□□□□□ -0.83
MDC1-205ENST00000425072 FCRL1Q96LA6 429 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 SLC25A23Q9BV35 468 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 MRPL1Q9BYD6 325 aaKnown RBP9.85□□□□□ -0.83
MDC1-205ENST00000425072 SLC6A16Q9GZN6 736 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms