RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 STK40Q8N2I9 435 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 C9orf62Q8N4C0 152 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 C19orf18Q8NEA5 215 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 LPCAT1Q8NF37 534 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 ZNF431Q8TF32 576 aaPredicted RBP10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 NELL1Q92832 810 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 CDKN2AIPNLQ96HQ2 116 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 OPALINQ96PE5 141 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 SLC9A7Q96T83 725 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 NMRK2Q9NPI5 230 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 B3GAT2Q9NPZ5 323 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 STOML2Q9UJZ1 356 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 ERVW-1Q9UQF0 538 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 U3KQ87 197 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 PRR23AA6NEV1 266 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 POM121CA8CG34 1229 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 TOR1AO14656 332 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 AKAP8O43823 692 aaKnown RBP10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 HBP1O60381 514 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 CFDP00746 253 aaPredicted RBP10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 HMBSP08397 361 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 SLC2A2P11168 524 aaPredicted RBP10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 BCKDHAP12694 445 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 ARSBP15848 533 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 KDELR2P33947 212 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 EPHA5P54756 1037 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 FCN2Q15485 313 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 ZNF57Q68EA5 555 aaPredicted RBP10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 Q8N402 240 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 ARRDC4Q8NCT1 418 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 BEST4Q8NFU0 473 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 IMP4Q96G21 291 aaKnown RBP10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 DCLRE1CQ96SD1 692 aaKnown RBP10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 SLC25A51Q9H1U9 297 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 WASH6PQ9NQA3 447 aa10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 AFF4Q9UHB7 1163 aaKnown RBP10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 SAMD4AQ9UPU9 718 aaKnown RBP10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 NOSIPQ9Y314 301 aaKnown RBP10.88□□□□□ -0.67
SEC61A1-202ENST00000424880 MCM3APO60318 1980 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 LCHNA4D1U4 455 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 SLC35F4A4IF30 521 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 LINC01387J3KSC0 135 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 TRIM3O75382 744 aaPredicted RBP10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 SERPINI2O75830 405 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 TSPAN12O95859 305 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 ATXN1LP0C7T5 689 aaKnown RBP10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 HLA-DMAP28067 261 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 S100A3P33764 101 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 GGT2P36268 569 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 GZMMP51124 257 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 RIN1Q13671 783 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 IL18Q14116 193 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 KCTD2Q14681 263 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 INTS6LQ5JSJ4 861 aaKnown RBP10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 BRAT1Q6PJG6 821 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 PDZD3Q86UT5 571 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 LINC00518Q8N0U6 118 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 CELF5Q8N6W0 485 aaKnown RBP10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 USP7Q93009 1102 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 PANX1Q96RD7 426 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 TCF25Q9BQ70 676 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 CPPED1Q9BRF8 314 aaPredicted RBP10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 NUSAP1Q9BXS6 441 aaKnown RBP10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 DERL2Q9GZP9 239 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 TRPM7Q96QT4 1865 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 LGALS8O00214 317 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 TNFRSF11BO00300 401 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 MYL12BO14950 172 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 ULK1O75385 1050 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 MYL12AP19105 171 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 CTBP2P56545 445 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 PER3P56645 1201 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 RGS1Q08116 209 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 ZBTB6Q15916 424 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 ZRANB3Q5FWF4 1079 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 BCL2L15Q5TBC7 163 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 TRIQKQ629K1 86 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 TMEM81Q6P7N7 255 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 TLK2Q86UE8 772 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 PAAF1Q9BRP4 392 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 GTPBP2Q9BX10 602 aaKnown RBP10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 POLR2J2Q9GZM3 115 aaKnown RBP10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 SPATA6Q9NWH7 488 aaPredicted RBP10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 PPT2Q9UMR5 302 aa10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 PIN4Q9Y237 131 aaKnown RBP10.87□□□□□ -0.67
SEC61A1-202ENST00000424880 GRXCR2A6NFK2 248 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 FAM25EA8MYX2 175 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 PIRO00625 290 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 PI15O43692 258 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 ZNF623O75123 536 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 CCNDBP1O95273 360 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 NNMTP40261 264 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 MAGEA2P43356 314 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 MAP2K3P46734 347 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 IL2P60568 153 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 ABATP80404 500 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 ASAH1Q13510 395 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 GLYR1Q49A26 553 aaPredicted RBP10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 CLVS2Q5SYC1 327 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 PTCHD4Q6ZW05 846 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms