RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 SCAMP2O15127 329 aaKnown RBP11.44□□□□□ -0.58
PTPRN-204ENST00000423636 UMPSP11172 480 aa11.44□□□□□ -0.58
PTPRN-204ENST00000423636 AK4P27144 223 aaPredicted RBP11.44□□□□□ -0.58
PTPRN-204ENST00000423636 RAB8AP61006 207 aa11.44□□□□□ -0.58
PTPRN-204ENST00000423636 BIRC2Q13490 618 aa11.44□□□□□ -0.58
PTPRN-204ENST00000423636 TP53BP2Q13625 1128 aa11.44□□□□□ -0.58
PTPRN-204ENST00000423636 SYT16Q17RD7 645 aa11.44□□□□□ -0.58
PTPRN-204ENST00000423636 LEXMQ3ZCV2 418 aa11.44□□□□□ -0.58
PTPRN-204ENST00000423636 THAP5Q7Z6K1 395 aa11.44□□□□□ -0.58
PTPRN-204ENST00000423636 METTL3Q86U44 580 aaKnown RBP11.44□□□□□ -0.58
PTPRN-204ENST00000423636 ZNF761Q86XN6 746 aaPredicted RBP11.44□□□□□ -0.58
PTPRN-204ENST00000423636 OR9A1PQ8NGU1 263 aa11.44□□□□□ -0.58
PTPRN-204ENST00000423636 THAP11Q96EK4 314 aa11.44□□□□□ -0.58
PTPRN-204ENST00000423636 COG8Q96MW5 612 aa11.44□□□□□ -0.58
PTPRN-204ENST00000423636 C17orf62Q9BQA9 187 aa11.44□□□□□ -0.58
PTPRN-204ENST00000423636 TRMT61BQ9BVS5 477 aaKnown RBP11.44□□□□□ -0.58
PTPRN-204ENST00000423636 OSBPL10Q9BXB5 764 aa11.44□□□□□ -0.58
PTPRN-204ENST00000423636 SLC6A16Q9GZN6 736 aa11.44□□□□□ -0.58
PTPRN-204ENST00000423636 QRSL1Q9H0R6 528 aaKnown RBP11.44□□□□□ -0.58
PTPRN-204ENST00000423636 EQTNQ9NQ60 294 aa11.44□□□□□ -0.58
PTPRN-204ENST00000423636 BCKDKO14874 412 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 MPC1LP0DKB6 136 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 FGL2Q14314 439 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 GBX1Q14549 363 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 AP1ARQ63HQ0 302 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 AHSA2Q719I0 299 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 AMZ2Q86W34 360 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 ANKRD53Q8N9V6 530 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 CHDHQ8NE62 594 aaPredicted RBP11.43□□□□□ -0.58
PTPRN-204ENST00000423636 SMARCD2Q92925 531 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 COQ10AQ96MF6 247 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 CSF3RQ99062 836 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 GORASP2Q9H8Y8 452 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 CCDC177Q9NQR7 707 aaPredicted RBP11.43□□□□□ -0.58
PTPRN-204ENST00000423636 PADI4Q9UM07 663 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 TBC1D3DA0A087WVF3 549 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 TBC1D3IA0A087WXS9 549 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 TBC1D3EA0A087X179 549 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 TBC1D3KA0A087X1G2 549 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 TBC1D3FA6NER0 549 aaPredicted RBP11.43□□□□□ -0.58
PTPRN-204ENST00000423636 TBC1D3LB9A6J9 549 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 ZNF197O14709 1029 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 GCM2O75603 506 aaPredicted RBP11.43□□□□□ -0.58
PTPRN-204ENST00000423636 SOX14O95416 240 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 TBC1D3HP0C7X1 549 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 PNLIPRP1P54315 467 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 EPHA5P54756 1037 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 ELAVL3Q14576 367 aaKnown RBP11.43□□□□□ -0.58
PTPRN-204ENST00000423636 DPY19L1Q2PZI1 675 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 SOWAHCQ53LP3 525 aaPredicted RBP11.43□□□□□ -0.58
PTPRN-204ENST00000423636 CCNYL2Q5T2Q4 361 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 CPZQ66K79 652 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 TBC1D3GQ6DHY5 549 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 TBC1D3CQ6IPX1 549 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 BCDIN3DQ7Z5W3 292 aaKnown RBP11.43□□□□□ -0.58
PTPRN-204ENST00000423636 ADHFE1Q8IWW8 467 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 ETFBKMTQ8IXQ9 262 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 TBC1D3Q8IZP1 549 aaPredicted RBP11.43□□□□□ -0.58
PTPRN-204ENST00000423636 ZNF513Q8N8E2 541 aaPredicted RBP11.43□□□□□ -0.58
PTPRN-204ENST00000423636 HM13Q8TCT9 377 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 SLC5A11Q8WWX8 675 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 RPL3LQ92901 407 aaKnown RBP11.43□□□□□ -0.58
PTPRN-204ENST00000423636 SH3GL3Q99963 347 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 KLHL31Q9H511 634 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 KCNK12Q9HB15 430 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 SLAMF7Q9NQ25 335 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 TEX10Q9NXF1 929 aaPredicted RBP11.43□□□□□ -0.58
PTPRN-204ENST00000423636 THUMPD1Q9NXG2 353 aaKnown RBP11.43□□□□□ -0.58
PTPRN-204ENST00000423636 RUVBL1Q9Y265 456 aaKnown RBP11.43□□□□□ -0.58
PTPRN-204ENST00000423636 IRAK3Q9Y616 596 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 LILRB5O75023 590 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 SCELO95171 688 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 FABP3P05413 133 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 PSMB9P28065 219 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 DRD3P35462 400 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 OPRD1P41143 372 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 ALDH3B2P48448 385 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 TAS2R38P59533 333 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 PPP2R2BQ00005 443 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 RGNQ15493 299 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 KCTD21Q4G0X4 260 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 C1orf53Q5VUE5 145 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 OR2T5Q6IEZ7 315 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 TMIGD1Q6UXZ0 262 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 BTLAQ7Z6A9 289 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 YAF2Q8IY57 180 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 PAPD5Q8NDF8 572 aaKnown RBP11.43□□□□□ -0.58
PTPRN-204ENST00000423636 PIK3C3Q8NEB9 887 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 OR2T29Q8NH02 315 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 CSGALNACT1Q8TDX6 532 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 PROX1Q92786 737 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 ARMC5Q96C12 935 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 PPCDCQ96CD2 204 aa11.43□□□□□ -0.58
PTPRN-204ENST00000423636 SPATA6Q9NWH7 488 aaPredicted RBP11.43□□□□□ -0.58
PTPRN-204ENST00000423636 PRAMEF25A6NGN4 478 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 C21orf33P30042 268 aaPredicted RBP11.42□□□□□ -0.58
PTPRN-204ENST00000423636 TIA1P31483 386 aaKnown RBP eCLIP11.42□□□□□ -0.58
PTPRN-204ENST00000423636 CLK3P49761 638 aaKnown RBP11.42□□□□□ -0.58
PTPRN-204ENST00000423636 MLLT10P55197 1068 aa11.42□□□□□ -0.58
PTPRN-204ENST00000423636 ABHD18Q0P651 414 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms