RNA–Protein interactions for RNA: ENST00000421922.6

CCDC28B-202, Transcript of coiled-coil domain containing 28B, humanhuman

TSL 1 (best) BASIC

Gene CCDC28B, Length 1,415 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-202ENST00000421922 SNAP47Q5SQN1 464 aa16.35■□□□□ 0.21
CCDC28B-202ENST00000421922 WDR74Q6RFH5 385 aaPredicted RBP16.35■□□□□ 0.21
CCDC28B-202ENST00000421922 USP53Q70EK8 1073 aa16.35■□□□□ 0.21
CCDC28B-202ENST00000421922 ASCL5Q7RTU5 278 aa16.35■□□□□ 0.21
CCDC28B-202ENST00000421922 SUMF1Q8NBK3 374 aa16.35■□□□□ 0.21
CCDC28B-202ENST00000421922 GLB1L3Q8NCI6 653 aaPredicted RBP16.35■□□□□ 0.21
CCDC28B-202ENST00000421922 OR9I1Q8NGQ6 314 aa16.35■□□□□ 0.21
CCDC28B-202ENST00000421922 CLHC1Q8NHS4 586 aa16.35■□□□□ 0.21
CCDC28B-202ENST00000421922 RHBDD1Q8TEB9 315 aa16.35■□□□□ 0.21
CCDC28B-202ENST00000421922 FCRL1Q96LA6 429 aa16.35■□□□□ 0.21
CCDC28B-202ENST00000421922 FCRL4Q96PJ5 515 aa16.35■□□□□ 0.21
CCDC28B-202ENST00000421922 DPYSL5Q9BPU6 564 aa16.35■□□□□ 0.21
CCDC28B-202ENST00000421922 EDEM2Q9BV94 578 aa16.35■□□□□ 0.21
CCDC28B-202ENST00000421922 PDE7BQ9NP56 450 aa16.35■□□□□ 0.21
CCDC28B-202ENST00000421922 FTSJ1Q9UET6 329 aa16.35■□□□□ 0.21
CCDC28B-202ENST00000421922 MCM8Q9UJA3 840 aa16.35■□□□□ 0.21
CCDC28B-202ENST00000421922 DLGAP4Q9Y2H0 992 aa16.35■□□□□ 0.21
CCDC28B-202ENST00000421922 MN1Q10571 1320 aaPredicted RBP16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 A0A088AWK7 358 aa16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 FAM234BA2RU67 622 aa16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 LRIT2A6NDA9 550 aa16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 BBIP1A8MTZ0 92 aa16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 PLPP1O14494 284 aa16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 TXNDC9O14530 226 aa16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 ERI3O43414 337 aaKnown RBP16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 RPLP0P05388 317 aaKnown RBP16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 KLK1P06870 262 aa16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 ZNF10P21506 573 aaPredicted RBP16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 CD1CP29017 333 aa16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 HNRNPH1P31943 449 aaKnown RBP16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 POLR2JP52435 117 aaKnown RBP16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 PLA2G16P53816 162 aa16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 VSX2P58304 361 aaPredicted RBP16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 SPEM2Q0P670 501 aa16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 SF3A2Q15428 464 aaKnown RBP16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 ZIC1Q15915 447 aa16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 PROX2Q3B8N5 592 aa16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 PERM1Q5SV97 790 aa16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 CCNYL2Q5T2Q4 361 aa16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 FBXO42Q6P3S6 717 aa16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 WDR48Q8TAF3 677 aa16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 NT5CQ8TCD5 201 aa16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 GAL3ST3Q96A11 431 aa16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 CNDP2Q96KP4 475 aaKnown RBP16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 KCNC2Q96PR1 638 aa16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 OR2A5Q96R48 311 aa16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 C17orf62Q9BQA9 187 aa16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 TMEM9BQ9NQ34 198 aa16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 SIRT5Q9NXA8 310 aa16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 BAIAP2L1Q9UHR4 511 aa16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 ADAM29Q9UKF5 820 aa16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 PILRAQ9UKJ1 303 aa16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 UNC13CQ8NB66 2214 aa16.34■□□□□ 0.21
CCDC28B-202ENST00000421922 RP1P56715 2156 aa16.33■□□□□ 0.21
CCDC28B-202ENST00000421922 LY6G6EA0A0G2JKS1 128 aa16.33■□□□□ 0.2
CCDC28B-202ENST00000421922 DYTNA2CJ06 578 aa16.33■□□□□ 0.2
CCDC28B-202ENST00000421922 CCDC154A6NI56 674 aa16.33■□□□□ 0.2
CCDC28B-202ENST00000421922 H0YGG7 62 aa16.33■□□□□ 0.2
CCDC28B-202ENST00000421922 ZSCAN9O15535 394 aaPredicted RBP16.33■□□□□ 0.2
CCDC28B-202ENST00000421922 KIF1CO43896 1103 aaKnown RBP16.33■□□□□ 0.2
CCDC28B-202ENST00000421922 PRMT3O60678 531 aa16.33■□□□□ 0.2
CCDC28B-202ENST00000421922 ARFIP1P53367 373 aa16.33■□□□□ 0.2
CCDC28B-202ENST00000421922 CLDN8P56748 225 aa16.33■□□□□ 0.2
CCDC28B-202ENST00000421922 ARF3P61204 181 aaPredicted RBP16.33■□□□□ 0.2
CCDC28B-202ENST00000421922 ART3Q13508 389 aa16.33■□□□□ 0.2
CCDC28B-202ENST00000421922 AASDHQ4L235 1098 aaPredicted RBP16.33■□□□□ 0.2
CCDC28B-202ENST00000421922 TMTC4Q5T4D3 741 aa16.33■□□□□ 0.2
CCDC28B-202ENST00000421922 GALNT18Q6P9A2 607 aa16.33■□□□□ 0.2
CCDC28B-202ENST00000421922 ABHD13Q7L211 337 aa16.33■□□□□ 0.2
CCDC28B-202ENST00000421922 VN1R4Q7Z5H5 301 aa16.33■□□□□ 0.2
CCDC28B-202ENST00000421922 CSNK1A1LQ8N752 337 aa16.33■□□□□ 0.2
CCDC28B-202ENST00000421922 OR2L5Q8NG80 312 aa16.33■□□□□ 0.2
CCDC28B-202ENST00000421922 SPDL1Q96EA4 605 aa16.33■□□□□ 0.2
CCDC28B-202ENST00000421922 RTKNQ9BST9 563 aa16.33■□□□□ 0.2
CCDC28B-202ENST00000421922 ROGDIQ9GZN7 287 aa16.33■□□□□ 0.2
CCDC28B-202ENST00000421922 LRRN3Q9H3W5 708 aa16.33■□□□□ 0.2
CCDC28B-202ENST00000421922 BTBD3Q9Y2F9 522 aa16.33■□□□□ 0.2
CCDC28B-202ENST00000421922 U3KQA8 63 aa16.33■□□□□ 0.2
CCDC28B-202ENST00000421922 DCHS1Q96JQ0 3298 aa16.32■□□□□ 0.2
CCDC28B-202ENST00000421922 B2RBV5 119 aa16.32■□□□□ 0.2
CCDC28B-202ENST00000421922 CFLARO15519 480 aa16.32■□□□□ 0.2
CCDC28B-202ENST00000421922 PRAMEF10O60809 474 aa16.32■□□□□ 0.2
CCDC28B-202ENST00000421922 LRP3O75074 770 aa16.32■□□□□ 0.2
CCDC28B-202ENST00000421922 LRATO95237 230 aa16.32■□□□□ 0.2
CCDC28B-202ENST00000421922 CPNE6O95741 557 aa16.32■□□□□ 0.2
CCDC28B-202ENST00000421922 C9P02748 559 aa16.32■□□□□ 0.2
CCDC28B-202ENST00000421922 DDX5P17844 614 aaKnown RBP16.32■□□□□ 0.2
CCDC28B-202ENST00000421922 PRPS1L1P21108 318 aa16.32■□□□□ 0.2
CCDC28B-202ENST00000421922 CSF2RBP32927 897 aa16.32■□□□□ 0.2
CCDC28B-202ENST00000421922 RPL3P39023 403 aaKnown RBP16.32■□□□□ 0.2
CCDC28B-202ENST00000421922 TSFMP43897 325 aaKnown RBP16.32■□□□□ 0.2
CCDC28B-202ENST00000421922 SEPHS1P49903 392 aa16.32■□□□□ 0.2
CCDC28B-202ENST00000421922 NUDT2P50583 147 aa16.32■□□□□ 0.2
CCDC28B-202ENST00000421922 MAPK12P53778 367 aa16.32■□□□□ 0.2
CCDC28B-202ENST00000421922 SLC14A1Q13336 389 aa16.32■□□□□ 0.2
CCDC28B-202ENST00000421922 DPY19L1Q2PZI1 675 aa16.32■□□□□ 0.2
CCDC28B-202ENST00000421922 HKDC1Q2TB90 917 aa16.32■□□□□ 0.2
CCDC28B-202ENST00000421922 DEFB110Q30KQ9 67 aa16.32■□□□□ 0.2
CCDC28B-202ENST00000421922 OR4C11Q6IEV9 310 aa16.32■□□□□ 0.2
CCDC28B-202ENST00000421922 FRMPD2BQ6IN97 320 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms