RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 CHST10O43529 356 aa10.39□□□□□ -0.75
SSBP3-206ENST00000420121 MAN1A2O60476 641 aa10.39□□□□□ -0.75
SSBP3-206ENST00000420121 PRAMEF4O60810 478 aa10.39□□□□□ -0.75
SSBP3-206ENST00000420121 CDC123O75794 336 aaPredicted RBP10.39□□□□□ -0.75
SSBP3-206ENST00000420121 WFS1O76024 890 aa10.39□□□□□ -0.75
SSBP3-206ENST00000420121 CLDN1O95832 211 aa10.39□□□□□ -0.75
SSBP3-206ENST00000420121 DDAH2O95865 285 aa10.39□□□□□ -0.75
SSBP3-206ENST00000420121 ZNF888P0CJ79 500 aaPredicted RBP10.39□□□□□ -0.75
SSBP3-206ENST00000420121 EDN3P14138 238 aa10.39□□□□□ -0.75
SSBP3-206ENST00000420121 GMPRP36959 345 aa10.39□□□□□ -0.75
SSBP3-206ENST00000420121 GDF5P43026 501 aa10.39□□□□□ -0.75
SSBP3-206ENST00000420121 OLR1P78380 273 aa10.39□□□□□ -0.75
SSBP3-206ENST00000420121 ARG2P78540 354 aa10.39□□□□□ -0.75
SSBP3-206ENST00000420121 CSHL1Q14406 222 aa10.39□□□□□ -0.75
SSBP3-206ENST00000420121 HERC3Q15034 1050 aa10.39□□□□□ -0.75
SSBP3-206ENST00000420121 DEFB134Q4QY38 66 aa10.39□□□□□ -0.75
SSBP3-206ENST00000420121 MFSD4BQ5TF39 518 aa10.39□□□□□ -0.75
SSBP3-206ENST00000420121 PRAMEF9Q5VWM5 478 aa10.39□□□□□ -0.75
SSBP3-206ENST00000420121 ZDHHC24Q6UX98 284 aa10.39□□□□□ -0.75
SSBP3-206ENST00000420121 TMPRSS11BQ86T26 416 aa10.39□□□□□ -0.75
SSBP3-206ENST00000420121 ADAMTSL2Q86TH1 951 aa10.39□□□□□ -0.75
SSBP3-206ENST00000420121 PYROXD1Q8WU10 500 aa10.39□□□□□ -0.75
SSBP3-206ENST00000420121 METTL21AQ8WXB1 218 aa10.39□□□□□ -0.75
SSBP3-206ENST00000420121 GPR22Q99680 433 aa10.39□□□□□ -0.75
SSBP3-206ENST00000420121 TMEM79Q9BSE2 394 aa10.39□□□□□ -0.75
SSBP3-206ENST00000420121 UNKQ9C0B0 810 aaKnown RBP10.39□□□□□ -0.75
SSBP3-206ENST00000420121 DERL2Q9GZP9 239 aa10.39□□□□□ -0.75
SSBP3-206ENST00000420121 CAB39LQ9H9S4 337 aa10.39□□□□□ -0.75
SSBP3-206ENST00000420121 SAYSD1Q9NPB0 183 aa10.39□□□□□ -0.75
SSBP3-206ENST00000420121 NSMCE4AQ9NXX6 385 aa10.39□□□□□ -0.75
SSBP3-206ENST00000420121 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.39□□□□□ -0.753e-6■■■■□ 21.7
SSBP3-206ENST00000420121 CACNA1DQ01668 2161 aa10.39□□□□□ -0.75
SSBP3-206ENST00000420121 TRAV17A0A0B4J275 112 aa10.38□□□□□ -0.75
SSBP3-206ENST00000420121 A1L4Q6 167 aa10.38□□□□□ -0.75
SSBP3-206ENST00000420121 DYTNA2CJ06 578 aa10.38□□□□□ -0.75
SSBP3-206ENST00000420121 OR5H15A6NDH6 313 aa10.38□□□□□ -0.75
SSBP3-206ENST00000420121 MAGEB17A8MXT2 336 aa10.38□□□□□ -0.75
SSBP3-206ENST00000420121 EIF3HO15372 352 aaKnown RBP eCLIP10.38□□□□□ -0.75
SSBP3-206ENST00000420121 PHGDHO43175 533 aaKnown RBP10.38□□□□□ -0.75
SSBP3-206ENST00000420121 WISP2O76076 250 aa10.38□□□□□ -0.75
SSBP3-206ENST00000420121 FHP07954 510 aa10.38□□□□□ -0.75
SSBP3-206ENST00000420121 ICAM2P13598 275 aa10.38□□□□□ -0.75
SSBP3-206ENST00000420121 IL10P22301 178 aa10.38□□□□□ -0.75
SSBP3-206ENST00000420121 AGTR2P50052 363 aa10.38□□□□□ -0.75
SSBP3-206ENST00000420121 POU4F1Q01851 419 aa10.38□□□□□ -0.75
SSBP3-206ENST00000420121 ABRAXAS2Q15018 415 aa10.38□□□□□ -0.75
SSBP3-206ENST00000420121 TGFBIQ15582 683 aa10.38□□□□□ -0.75
SSBP3-206ENST00000420121 ZKSCAN8Q15776 578 aaPredicted RBP10.38□□□□□ -0.75
SSBP3-206ENST00000420121 BTBD16Q32M84 506 aa10.38□□□□□ -0.75
SSBP3-206ENST00000420121 SFT2D3Q587I9 215 aa10.38□□□□□ -0.75
SSBP3-206ENST00000420121 FCRLBQ6BAA4 426 aa10.38□□□□□ -0.75
SSBP3-206ENST00000420121 MYO7BQ6PIF6 2116 aa10.38□□□□□ -0.75
SSBP3-206ENST00000420121 PAPD4Q6PIY7 484 aaKnown RBP10.38□□□□□ -0.75
SSBP3-206ENST00000420121 SLCO4C1Q6ZQN7 724 aa10.38□□□□□ -0.75
SSBP3-206ENST00000420121 CYS1Q717R9 158 aa10.38□□□□□ -0.75
SSBP3-206ENST00000420121 ZNF572Q7Z3I7 529 aaPredicted RBP10.38□□□□□ -0.75
SSBP3-206ENST00000420121 SPATA6LQ8N4H0 392 aa10.38□□□□□ -0.75
SSBP3-206ENST00000420121 BBOF1Q8ND07 529 aa10.38□□□□□ -0.75
SSBP3-206ENST00000420121 TBC1D20Q96BZ9 403 aa10.38□□□□□ -0.75
SSBP3-206ENST00000420121 UBXN10Q96LJ8 280 aa10.38□□□□□ -0.75
SSBP3-206ENST00000420121 RBBP8Q99708 897 aa10.38□□□□□ -0.75
SSBP3-206ENST00000420121 AIF1LQ9BQI0 150 aa10.38□□□□□ -0.75
SSBP3-206ENST00000420121 GPAMQ9HCL2 828 aa10.38□□□□□ -0.75
SSBP3-206ENST00000420121 COPG2Q9UBF2 871 aa10.38□□□□□ -0.75
SSBP3-206ENST00000420121 CTNNAL1Q9UBT7 734 aa10.38□□□□□ -0.75
SSBP3-206ENST00000420121 C19orf25Q9UFG5 118 aaPredicted RBP10.38□□□□□ -0.75
SSBP3-206ENST00000420121 SLC5A6Q9Y289 635 aa10.38□□□□□ -0.75
SSBP3-206ENST00000420121 DYRK1BQ9Y463 629 aa10.38□□□□□ -0.75
SSBP3-206ENST00000420121 KCNE2Q9Y6J6 123 aa10.38□□□□□ -0.75
SSBP3-206ENST00000420121 IGKV3D-11A0A0A0MRZ8 115 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 PABPN1LA6NDY0 278 aaKnown RBP10.37□□□□□ -0.75
SSBP3-206ENST00000420121 NDC80O14777 642 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 FAM155BO75949 473 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 WDR47O94967 919 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 SERPIND1P05546 499 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 SERPINA6P08185 405 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 CD1DP15813 335 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 EPORP19235 508 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 MST1P26927 711 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 GGT5P36269 586 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 KCNC1P48547 511 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 HNMTP50135 292 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 ST13P50502 369 aaKnown RBP10.37□□□□□ -0.75
SSBP3-206ENST00000420121 SLC26A5P58743 744 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 RAB8AP61006 207 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 ETF1P62495 437 aaKnown RBP10.37□□□□□ -0.75
SSBP3-206ENST00000420121 AP2B1P63010 937 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 BTG2P78543 158 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 GUCY2DQ02846 1103 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 NOTCH2Q04721 2471 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 SRSF11Q05519 484 aaKnown RBP10.37□□□□□ -0.75
SSBP3-206ENST00000420121 ZNF33BQ06732 778 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 RGS1Q08116 209 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 CALCOCO2Q13137 446 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 USP10Q14694 798 aaKnown RBP10.37□□□□□ -0.75
SSBP3-206ENST00000420121 OR4D1Q15615 310 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 NSDHLQ15738 373 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 INAQ16352 499 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 FBXO48Q5FWF7 155 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 ACER2Q5QJU3 275 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms