RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 CLNS1AP54105 237 aaKnown RBP13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 ATXN3P54252 364 aaPredicted RBP13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 RAE1P78406 368 aaKnown RBP13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 STX5Q13190 355 aa13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 RPS6KA2Q15349 733 aa13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 TCEAL6Q6IPX3 200 aa13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 TMEM71Q6P5X7 295 aa13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 MSANTD1Q6ZTZ1 278 aa13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 ASPGQ86U10 573 aa13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 ZNF761Q86XN6 746 aaPredicted RBP13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 ZCCHC7Q8N3Z6 543 aaKnown RBP13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 ZNF655Q8N720 491 aaPredicted RBP13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 CAMKVQ8NCB2 501 aa13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 OR2L5Q8NG80 312 aa13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 WDR48Q8TAF3 677 aa13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 KLHL6Q8WZ60 621 aa13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 TCEAL3Q969E4 200 aa13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 MS4A6EQ96DS6 147 aa13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 SLC41A2Q96JW4 573 aa13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 TBCDQ9BTW9 1192 aa13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 EDEM2Q9BV94 578 aa13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 REXO4Q9GZR2 422 aaKnown RBP13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 CLMPQ9H6B4 373 aa13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 ACTR5Q9H9F9 607 aaPredicted RBP13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 GIMAP2Q9UG22 337 aa13.61□□□□□ -0.23
SHMT1P1-201ENST00000419974 TMEM131Q92545 1883 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 PI4KAP42356 2102 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 PLPP1O14494 284 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 CDX4O14627 284 aaPredicted RBP13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 TBX19O60806 448 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 IL6P05231 212 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 SNRPB2P08579 225 aaKnown RBP13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 ADRB1P08588 477 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 ESRRAP11474 423 aaPredicted RBP13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 COX4I1P13073 169 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 ST6GAL1P15907 406 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 SDC1P18827 310 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 CDH3P22223 829 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 BSGP35613 385 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 GABRA4P48169 554 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 OR1D5P58170 312 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 CFHR1Q03591 330 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 RGS1Q08116 209 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 TGM3Q08188 693 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 DDX39BQ13838 428 aaKnown RBP13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 CYLC2Q14093 348 aaPredicted RBP13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 NIPAL1Q6NVV3 410 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 ABHD17CQ6PCB6 329 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 HACD2Q6Y1H2 254 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 ASRGL1Q7L266 308 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 ZNF771Q7L3S4 317 aaPredicted RBP13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 COMMD6Q7Z4G1 85 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 TRIM73Q86UV7 250 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 FAM20CQ8IXL6 584 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 ARHGEF39Q8N4T4 335 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 EID2Q8N6I1 236 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 C1orf52Q8N6N3 182 aaKnown RBP13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 SLC13A3Q8WWT9 602 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 GAL3ST3Q96A11 431 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 CCDC74AQ96AQ1 378 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 MTERF3Q96E29 417 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 AHCYL2Q96HN2 611 aaKnown RBP13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 KCNC2Q96PR1 638 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 MRPL1Q9BYD6 325 aaKnown RBP13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 ROGDIQ9GZN7 287 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 OR51B5Q9H339 312 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 CLK4Q9HAZ1 481 aaKnown RBP13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 TMEM9BQ9NQ34 198 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 LHX9Q9NQ69 397 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 DLGAP4Q9Y2H0 992 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 SLC22A7Q9Y694 548 aa13.6□□□□□ -0.23
SHMT1P1-201ENST00000419974 A0A1W2PP18 115 aa13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 FITM1A5D6W6 292 aa13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 C4orf47A7E2U8 309 aa13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 NDUFS4O43181 175 aa13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 CBX6O95503 412 aa13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 CPNE6O95741 557 aa13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 CKMT2P17540 419 aa13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 ALDH4A1P30038 563 aa13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 HNRNPH1P31943 449 aaKnown RBP13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 RPL3P39023 403 aaKnown RBP13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 PPP1CAP62136 330 aa13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 SRSF11Q05519 484 aaKnown RBP13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 ZNF763Q0D2J5 394 aa13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 AGKQ53H12 422 aa13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 GUSBP11Q6P575 273 aa13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 PAOXQ6QHF9 649 aa13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 UBE3DQ7Z6J8 389 aa13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 D2HGDHQ8N465 521 aa13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 LIX1Q8N485 282 aa13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 RNF175Q8N4F7 328 aa13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 NATD1Q8N6N6 113 aa13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 OR4D9Q8NGE8 314 aa13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 OR8J2Q8NGG1 315 aa13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 DNAJB8Q8NHS0 232 aa13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 NCSTNQ92542 709 aa13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 RERGQ96A58 199 aaPredicted RBP13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 SLC7A6OSQ96CW6 309 aaPredicted RBP13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 MAP3K3Q99759 626 aa13.59□□□□□ -0.23
SHMT1P1-201ENST00000419974 GTPBP2Q9BX10 602 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms