RNA–Protein interactions for RNA: ENST00000419074.5

RCC1-206, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-206ENST00000419074 RABEP2Q9H5N1 569 aa12.66□□□□□ -0.38
RCC1-206ENST00000419074 WDR55Q9H6Y2 383 aaPredicted RBP12.66□□□□□ -0.38
RCC1-206ENST00000419074 AKTIPQ9H8T0 292 aa12.66□□□□□ -0.38
RCC1-206ENST00000419074 LRTM1Q9HBL6 345 aa12.66□□□□□ -0.38
RCC1-206ENST00000419074 FBXO8Q9NRD0 319 aa12.66□□□□□ -0.38
RCC1-206ENST00000419074 STARD5Q9NSY2 213 aa12.66□□□□□ -0.38
RCC1-206ENST00000419074 IRAK4Q9NWZ3 460 aa12.66□□□□□ -0.38
RCC1-206ENST00000419074 RARRES3Q9UL19 164 aa12.66□□□□□ -0.38
RCC1-206ENST00000419074 RUVBL1Q9Y265 456 aaKnown RBP12.66□□□□□ -0.38
RCC1-206ENST00000419074 SLC22A7Q9Y694 548 aa12.66□□□□□ -0.38
RCC1-206ENST00000419074 GOLGA4Q13439 2230 aaKnown RBP12.66□□□□□ -0.38
RCC1-206ENST00000419074 GVINP1Q7Z2Y8 2422 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 CCDC187A0A096LP49 1063 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 GOLGA8QA0A0J9YX86 632 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 HYKKA2RU49 373 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 DCDC2BA2VCK2 349 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 GOLGA8OA6NCC3 632 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 GOLGA8NF8WBI6 632 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 H3BMH7 237 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 SAP18O00422 153 aaKnown RBP12.65□□□□□ -0.38
RCC1-206ENST00000419074 LSM1O15116 133 aaKnown RBP12.65□□□□□ -0.38
RCC1-206ENST00000419074 SNX3O60493 162 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 SEC22BO75396 215 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 SEMA3DO95025 777 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 FAM107AO95990 144 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 SMIM10L1P0DMW3 83 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 FGF5P12034 268 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 CCL4P13236 92 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 HNRNPH1P31943 449 aaKnown RBP12.65□□□□□ -0.38
RCC1-206ENST00000419074 ITGA1P56199 1179 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 SF3A3Q12874 501 aaKnown RBP eCLIP12.65□□□□□ -0.384e-8■■■■■ 30
RCC1-206ENST00000419074 EIF3IQ13347 325 aaKnown RBP12.65□□□□□ -0.38
RCC1-206ENST00000419074 NDUFA9Q16795 377 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 SMU1Q2TAY7 513 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 AP5B1Q2VPB7 878 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 FAM214AQ32MH5 1076 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 ATP6AP1LQ52LC2 224 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 C6orf136Q5SQH8 315 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 YOD1Q5VVQ6 348 aaPredicted RBP12.65□□□□□ -0.38
RCC1-206ENST00000419074 GARNL3Q5VVW2 1013 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 NXNQ6DKJ4 435 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 TMEM214Q6NUQ4 689 aaKnown RBP12.65□□□□□ -0.38
RCC1-206ENST00000419074 ABHD17CQ6PCB6 329 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 LARP4Q71RC2 724 aaKnown RBP eCLIP12.65□□□□□ -0.38
RCC1-206ENST00000419074 SPATA21Q7Z572 469 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 UBE3DQ7Z6J8 389 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 METTL4Q8N3J2 472 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 BMPERQ8N8U9 685 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 TTC29Q8NA56 475 aaPredicted RBP12.65□□□□□ -0.38
RCC1-206ENST00000419074 OR2L5Q8NG80 312 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 CEP70Q8NHQ1 597 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 UTP15Q8TED0 518 aaKnown RBP12.65□□□□□ -0.38
RCC1-206ENST00000419074 GAL3ST3Q96A11 431 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 APIPQ96GX9 242 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 SMIM10Q96HG1 83 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 EBF4Q9BQW3 602 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 TBCDQ9BTW9 1192 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 CCDC28BQ9BUN5 200 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 TMEM120AQ9BXJ8 343 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 MRPL1Q9BYD6 325 aaKnown RBP12.65□□□□□ -0.38
RCC1-206ENST00000419074 AICDAQ9GZX7 198 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 C1orf109Q9NX04 203 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 LOXL2Q9Y4K0 774 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 ASXL3Q9C0F0 2248 aa12.65□□□□□ -0.38
RCC1-206ENST00000419074 PTPRZ1P23471 2315 aaPredicted RBP12.65□□□□□ -0.39
RCC1-206ENST00000419074 ZNF292O60281 2723 aa12.64□□□□□ -0.39
RCC1-206ENST00000419074 POLR1CO15160 346 aaPredicted RBP12.64□□□□□ -0.39
RCC1-206ENST00000419074 ERI3O43414 337 aaKnown RBP12.64□□□□□ -0.39
RCC1-206ENST00000419074 PRR35P0CG20 571 aa12.64□□□□□ -0.39
RCC1-206ENST00000419074 ALOX12P18054 663 aa12.64□□□□□ -0.39
RCC1-206ENST00000419074 LBPP18428 481 aa12.64□□□□□ -0.39
RCC1-206ENST00000419074 RAP1GDS1P52306 607 aa12.64□□□□□ -0.39
RCC1-206ENST00000419074 PLA2G16P53816 162 aa12.64□□□□□ -0.39
RCC1-206ENST00000419074 ARSFP54793 590 aa12.64□□□□□ -0.39
RCC1-206ENST00000419074 RAB8AP61006 207 aa12.64□□□□□ -0.39
RCC1-206ENST00000419074 CBX1P83916 185 aa12.64□□□□□ -0.39
RCC1-206ENST00000419074 EMX2Q04743 252 aa12.64□□□□□ -0.39
RCC1-206ENST00000419074 ACSM2AQ08AH3 577 aa12.64□□□□□ -0.39
RCC1-206ENST00000419074 TARDBPQ13148 414 aaKnown RBP eCLIP12.64□□□□□ -0.39
RCC1-206ENST00000419074 KIAA0040Q15053 153 aa12.64□□□□□ -0.39
RCC1-206ENST00000419074 LSM12Q3MHD2 195 aaKnown RBP12.64□□□□□ -0.39
RCC1-206ENST00000419074 GALNTL6Q49A17 601 aa12.64□□□□□ -0.39
RCC1-206ENST00000419074 RFTN2Q52LD8 501 aaPredicted RBP12.64□□□□□ -0.39
RCC1-206ENST00000419074 SPIN4Q56A73 249 aa12.64□□□□□ -0.39
RCC1-206ENST00000419074 ACSM2BQ68CK6 577 aa12.64□□□□□ -0.39
RCC1-206ENST00000419074 OR4C11Q6IEV9 310 aa12.64□□□□□ -0.39
RCC1-206ENST00000419074 TRIM40Q6P9F5 258 aa12.64□□□□□ -0.39
RCC1-206ENST00000419074 ABHD13Q7L211 337 aa12.64□□□□□ -0.39
RCC1-206ENST00000419074 DGLUCYQ7Z3D6 616 aa12.64□□□□□ -0.39
RCC1-206ENST00000419074 ZFAND4Q86XD8 727 aa12.64□□□□□ -0.39
RCC1-206ENST00000419074 PPP1R3BQ86XI6 285 aa12.64□□□□□ -0.39
RCC1-206ENST00000419074 PARP9Q8IXQ6 854 aa12.64□□□□□ -0.39
RCC1-206ENST00000419074 GALNT15Q8N3T1 639 aa12.64□□□□□ -0.39
RCC1-206ENST00000419074 ARHGEF39Q8N4T4 335 aa12.64□□□□□ -0.39
RCC1-206ENST00000419074 RILPQ96NA2 401 aa12.64□□□□□ -0.39
RCC1-206ENST00000419074 QRFPRQ96P65 431 aa12.64□□□□□ -0.39
RCC1-206ENST00000419074 KCNC2Q96PR1 638 aa12.64□□□□□ -0.39
RCC1-206ENST00000419074 OR52B2Q96RD2 323 aa12.64□□□□□ -0.39
RCC1-206ENST00000419074 NDC1Q9BTX1 674 aa12.64□□□□□ -0.39
RCC1-206ENST00000419074 ROGDIQ9GZN7 287 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms