RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 SPEM1Q8N4L4 309 aa3.56□□□□□ -1.84
HMGB1P49-201ENST00000418882 POM121L12Q8N7R1 296 aa3.56□□□□□ -1.84
HMGB1P49-201ENST00000418882 OR52B6Q8NGF0 335 aa3.56□□□□□ -1.84
HMGB1P49-201ENST00000418882 CD99L2Q8TCZ2 262 aa3.56□□□□□ -1.84
HMGB1P49-201ENST00000418882 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P49-201ENST00000418882 RASL10AQ92737 203 aa3.56□□□□□ -1.84
HMGB1P49-201ENST00000418882 RIT1Q92963 219 aa3.56□□□□□ -1.84
HMGB1P49-201ENST00000418882 GAL3ST4Q96RP7 486 aa3.56□□□□□ -1.84
HMGB1P49-201ENST00000418882 FNDC4Q9H6D8 234 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P49-201ENST00000418882 PANK3Q9H999 370 aa3.56□□□□□ -1.84
HMGB1P49-201ENST00000418882 PLCL2Q9UPR0 1127 aa3.56□□□□□ -1.84
HMGB1P49-201ENST00000418882 RUVBL2Q9Y230 463 aaKnown RBP3.56□□□□□ -1.84
HMGB1P49-201ENST00000418882 TRAV18A0A075B6X5 111 aa3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 hCG_38984A0A1B0GV85 526 aa3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 TMEM150CB9EJG8 249 aa3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 SIGLEC5O15389 551 aa3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 PGLSO95336 258 aa3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 POP4O95707 220 aaKnown RBP3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 RPLP0P05388 317 aaKnown RBP3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 HOXD4P09016 255 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 FOLR2P14207 255 aa3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 GOT1P17174 413 aa3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 BCL3P20749 454 aa3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 IL4RP24394 825 aa3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 OXTRP30559 389 aa3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 HOXC13P31276 330 aa3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 OR3A1P47881 315 aa3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 ATP4BP51164 291 aa3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 NDST2P52849 883 aa3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 LIMK2P53671 638 aa3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 ZNF146Q15072 292 aa3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 FGD3Q5JSP0 725 aa3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 SHEQ5VZ18 495 aa3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 KLHL10Q6JEL2 608 aa3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 CAVIN1Q6NZI2 390 aaKnown RBP3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 TIPARPQ7Z3E1 657 aaKnown RBP3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 SPATA19Q7Z5L4 167 aa3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 FAM9BQ8IZU0 186 aa3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 SPAG16Q8N0X2 631 aa3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 PRSS35Q8N3Z0 413 aa3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 TEX26Q8N6G2 289 aa3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 OR9Q2Q8NGE9 314 aa3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 NCOA7Q8NI08 942 aa3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 CHURC1Q8WUH1 139 aa3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 SNRNP27Q8WVK2 155 aaKnown RBP3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 LURAP1Q96LR2 239 aa3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 ZNF597Q96LX8 424 aa3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 INPP5KQ9BT40 448 aa3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 TUBB1Q9H4B7 451 aa3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 NOCTQ9UK39 431 aaKnown RBP3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 MRPS18CQ9Y3D5 142 aaKnown RBP3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 STYXL1Q9Y6J8 313 aa3.55□□□□□ -1.84
HMGB1P49-201ENST00000418882 CROCCQ5TZA2 2017 aa3.54□□□□□ -1.84
HMGB1P49-201ENST00000418882 IGLV4-3A0A075B6K6 122 aa3.54□□□□□ -1.84
HMGB1P49-201ENST00000418882 A0A0U1RQG5 324 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P49-201ENST00000418882 HTR3EA5X5Y0 456 aa3.54□□□□□ -1.84
HMGB1P49-201ENST00000418882 TSPY2A6NKD2 308 aa3.54□□□□□ -1.84
HMGB1P49-201ENST00000418882 A8MU76 341 aa3.54□□□□□ -1.84
HMGB1P49-201ENST00000418882 HPRP00739 348 aa3.54□□□□□ -1.84
HMGB1P49-201ENST00000418882 QDPRP09417 244 aa3.54□□□□□ -1.84
HMGB1P49-201ENST00000418882 GPR183P32249 361 aa3.54□□□□□ -1.84
HMGB1P49-201ENST00000418882 PGFP49763 221 aa3.54□□□□□ -1.84
HMGB1P49-201ENST00000418882 CAPZA1P52907 286 aa3.54□□□□□ -1.84
HMGB1P49-201ENST00000418882 FKBP3Q00688 224 aaKnown RBP3.54□□□□□ -1.84
HMGB1P49-201ENST00000418882 ZFP36L1Q07352 338 aaKnown RBP3.54□□□□□ -1.84
HMGB1P49-201ENST00000418882 FAM47EQ6ZV65 393 aa3.54□□□□□ -1.84
HMGB1P49-201ENST00000418882 TRMT11Q7Z4G4 463 aaKnown RBP3.54□□□□□ -1.84
HMGB1P49-201ENST00000418882 CREBRFQ8IUR6 639 aa3.54□□□□□ -1.84
HMGB1P49-201ENST00000418882 C11orf52Q96A22 123 aa3.54□□□□□ -1.84
HMGB1P49-201ENST00000418882 SATB2Q9UPW6 733 aa3.54□□□□□ -1.84
HMGB1P49-201ENST00000418882 HBS1LQ9Y450 684 aaKnown RBP3.54□□□□□ -1.84
HMGB1P49-201ENST00000418882 LMO7DNF2Z398 122 aa3.53□□□□□ -1.84
HMGB1P49-201ENST00000418882 RNF103O00237 685 aa3.53□□□□□ -1.84
HMGB1P49-201ENST00000418882 PGRMC2O15173 223 aa3.53□□□□□ -1.84
HMGB1P49-201ENST00000418882 ZNF749O43361 778 aa3.53□□□□□ -1.84
HMGB1P49-201ENST00000418882 ACSL4O60488 711 aa3.53□□□□□ -1.84
HMGB1P49-201ENST00000418882 SP9P0CG40 484 aa3.53□□□□□ -1.84
HMGB1P49-201ENST00000418882 CAPGP40121 348 aa3.53□□□□□ -1.84
HMGB1P49-201ENST00000418882 GP5P40197 560 aa3.53□□□□□ -1.84
HMGB1P49-201ENST00000418882 PRELPP51888 382 aa3.53□□□□□ -1.84
HMGB1P49-201ENST00000418882 NDUFV3P56181 108 aaKnown RBP3.53□□□□□ -1.84
HMGB1P49-201ENST00000418882 KIAA0141Q14154 515 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P49-201ENST00000418882 UPP1Q16831 310 aa3.53□□□□□ -1.84
HMGB1P49-201ENST00000418882 CDO1Q16878 200 aa3.53□□□□□ -1.84
HMGB1P49-201ENST00000418882 MS4A18Q3C1V0 323 aa3.53□□□□□ -1.84
HMGB1P49-201ENST00000418882 LRRC37A5PQ49AS3 106 aa3.53□□□□□ -1.84
HMGB1P49-201ENST00000418882 MPP7Q5T2T1 576 aa3.53□□□□□ -1.84
HMGB1P49-201ENST00000418882 DCLRE1AQ6PJP8 1040 aa3.53□□□□□ -1.84
HMGB1P49-201ENST00000418882 GLRX5Q86SX6 157 aa3.53□□□□□ -1.84
HMGB1P49-201ENST00000418882 OR2L2Q8NH16 312 aa3.53□□□□□ -1.84
HMGB1P49-201ENST00000418882 NPRL2Q8WTW4 380 aa3.53□□□□□ -1.84
HMGB1P49-201ENST00000418882 AK8Q96MA6 479 aa3.53□□□□□ -1.84
HMGB1P49-201ENST00000418882 IL12RB2Q99665 862 aa3.53□□□□□ -1.84
HMGB1P49-201ENST00000418882 C10orf88Q9H8K7 445 aa3.53□□□□□ -1.84
HMGB1P49-201ENST00000418882 MINDY3Q9H8M7 445 aa3.53□□□□□ -1.84
HMGB1P49-201ENST00000418882 HEXA-AS1Q9H8Q6 139 aa3.53□□□□□ -1.84
HMGB1P49-201ENST00000418882 GPN1Q9HCN4 374 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P49-201ENST00000418882 EXOC1Q9NV70 894 aa3.53□□□□□ -1.84
HMGB1P49-201ENST00000418882 KLK11Q9UBX7 282 aa3.53□□□□□ -1.84
HMGB1P49-201ENST00000418882 SLC12A6Q9UHW9 1150 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms