RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 MAPK1P28482 360 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 TM4SF1P30408 202 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 BTG1P62324 171 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 NFIAQ12857 509 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 SF3A2Q15428 464 aaKnown RBP6.16□□□□□ -1.42
CCNT1-202ENST00000417344 SLC14A2Q15849 920 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 SNAPC1Q16533 368 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 INO80DQ53TQ3 878 aaPredicted RBP6.16□□□□□ -1.42
CCNT1-202ENST00000417344 XKR7Q5GH72 579 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 NHLRC3Q5JS37 347 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 DDI2Q5TDH0 399 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 SYPL2Q5VXT5 272 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 ESRP1Q6NXG1 681 aaKnown RBP6.16□□□□□ -1.42
CCNT1-202ENST00000417344 RANBP10Q6VN20 620 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 GCNT7Q6ZNI0 430 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 KIAA0907Q7Z7F0 614 aaPredicted RBP6.16□□□□□ -1.42
CCNT1-202ENST00000417344 MRPL10Q7Z7H8 261 aaKnown RBP6.16□□□□□ -1.42
CCNT1-202ENST00000417344 DENND1CQ8IV53 801 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 SLC44A2Q8IWA5 706 aaPredicted RBP6.16□□□□□ -1.42
CCNT1-202ENST00000417344 TP53INP2Q8IXH6 220 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 Q8N402 240 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 STPG2Q8N412 459 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 C12orf29Q8N999 325 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 OR4F6Q8NGB9 312 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 OR11H7Q8NGC8 314 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 NETO1Q8TDF5 533 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 CENPIQ92674 756 aaPredicted RBP6.16□□□□□ -1.42
CCNT1-202ENST00000417344 LPPQ93052 612 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 EXT2Q93063 718 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 SLC25A46Q96AG3 418 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 KLRG1Q96E93 195 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 ARL5BQ96KC2 179 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 NSUN5Q96P11 429 aaKnown RBP6.16□□□□□ -1.42
CCNT1-202ENST00000417344 TMEM175Q9BSA9 504 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 C11orf84Q9BUA3 381 aaPredicted RBP6.16□□□□□ -1.42
CCNT1-202ENST00000417344 SLC29A3Q9BZD2 475 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 ZNF436Q9C0F3 470 aaPredicted RBP6.16□□□□□ -1.42
CCNT1-202ENST00000417344 NT5DC2Q9H857 520 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 SLC28A3Q9HAS3 691 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 SLAMF7Q9NQ25 335 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 SDHAF3Q9NRP4 125 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 PRMT7Q9NVM4 692 aaPredicted RBP6.16□□□□□ -1.42
CCNT1-202ENST00000417344 HCN3Q9P1Z3 774 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 HECAQ9UBI9 543 aaPredicted RBP6.16□□□□□ -1.42
CCNT1-202ENST00000417344 MLXQ9UH92 298 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 TSPAN16Q9UKR8 245 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 FNDC3AQ9Y2H6 1198 aaKnown RBP6.16□□□□□ -1.42
CCNT1-202ENST00000417344 KCNK7Q9Y2U2 307 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 RNF215Q9Y6U7 377 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 GLYATL1P3A0A0U1RQE8 302 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 A0A1B0GTL3 188 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 LRRC14BA6NHZ5 514 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 MPTX1A8MV57 137 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 LGALS8O00214 317 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 IFRD1O00458 451 aaPredicted RBP6.16□□□□□ -1.42
CCNT1-202ENST00000417344 BNIP3LO60238 219 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 SELENOFO60613 162 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 HPGDSO60760 199 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 PSIP1O75475 530 aaKnown RBP6.16□□□□□ -1.42
CCNT1-202ENST00000417344 STBD1O95210 358 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 GDF11O95390 407 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 LGI1O95970 557 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 PFKMP08237 780 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 NFKB1P19838 968 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 PSMA1P25786 263 aaKnown RBP6.16□□□□□ -1.42
CCNT1-202ENST00000417344 APEX1P27695 318 aaKnown RBP6.16□□□□□ -1.42
CCNT1-202ENST00000417344 GGT2P36268 569 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 BAG6P46379 1132 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 INPP1P49441 399 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 CLCN5P51795 746 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 RPL6Q02878 288 aaKnown RBP6.16□□□□□ -1.42
CCNT1-202ENST00000417344 LCP2Q13094 533 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 GPR17Q13304 367 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 MADCAM1Q13477 382 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 PAFAH1B3Q15102 231 aaKnown RBP6.16□□□□□ -1.42
CCNT1-202ENST00000417344 SURF1Q15526 300 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 ZNF124Q15973 351 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 GTDC1Q4AE62 458 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 CELF3Q5SZQ8 465 aaKnown RBP6.16□□□□□ -1.42
CCNT1-202ENST00000417344 FAM171A1Q5VUB5 890 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 RGS7BPQ6MZT1 257 aaPredicted RBP6.16□□□□□ -1.42
CCNT1-202ENST00000417344 APOBEC3HQ6NTF7 200 aaKnown RBP6.16□□□□□ -1.42
CCNT1-202ENST00000417344 XRRA1Q6P2D8 792 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 FAHD1Q6P587 224 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 ATRAIDQ6UW56 229 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 LCLAT1Q6UWP7 414 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 HSDL2Q6YN16 418 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 Q6ZPB1 254 aaPredicted RBP6.16□□□□□ -1.42
CCNT1-202ENST00000417344 ABI3BPQ7Z7G0 1075 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 ZNF605Q86T29 641 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 JAZF1Q86VZ6 243 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 FAM217AQ8IXS0 508 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 TMEM145Q8NBT3 493 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 OR10Q1Q8NGQ4 319 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 WDR36Q8NI36 951 aaKnown RBP6.16□□□□□ -1.42
CCNT1-202ENST00000417344 RNF139Q8WU17 664 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 ZFPM2Q8WW38 1151 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 IRF7Q92985 503 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 HGDQ93099 445 aa6.16□□□□□ -1.42
CCNT1-202ENST00000417344 ULK4Q96C45 1275 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms