RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 CASQ1P31415 396 aa16.83■□□□□ 0.28
CPNE1-210ENST00000416778 SLC6A12P48065 614 aa16.83■□□□□ 0.28
CPNE1-210ENST00000416778 ETF1P62495 437 aaKnown RBP16.83■□□□□ 0.28
CPNE1-210ENST00000416778 REEP5Q00765 189 aa16.83■□□□□ 0.28
CPNE1-210ENST00000416778 RGS1Q08116 209 aa16.83■□□□□ 0.28
CPNE1-210ENST00000416778 ELOAQ14241 798 aaKnown RBP16.83■□□□□ 0.28
CPNE1-210ENST00000416778 RBBP5Q15291 538 aaKnown RBP16.83■□□□□ 0.28
CPNE1-210ENST00000416778 HIST2H2BCQ6DN03 193 aa16.83■□□□□ 0.28
CPNE1-210ENST00000416778 SLCO4C1Q6ZQN7 724 aa16.83■□□□□ 0.28
CPNE1-210ENST00000416778 TRPV3Q8NET8 790 aa16.83■□□□□ 0.28
CPNE1-210ENST00000416778 M1APQ8TC57 530 aa16.83■□□□□ 0.28
CPNE1-210ENST00000416778 TBC1D20Q96BZ9 403 aa16.83■□□□□ 0.28
CPNE1-210ENST00000416778 TAAR6Q96RI8 345 aa16.83■□□□□ 0.28
CPNE1-210ENST00000416778 AIF1LQ9BQI0 150 aa16.83■□□□□ 0.28
CPNE1-210ENST00000416778 DERL2Q9GZP9 239 aa16.83■□□□□ 0.28
CPNE1-210ENST00000416778 AICDAQ9GZX7 198 aa16.83■□□□□ 0.28
CPNE1-210ENST00000416778 CAB39LQ9H9S4 337 aa16.83■□□□□ 0.28
CPNE1-210ENST00000416778 SLC5A6Q9Y289 635 aa16.83■□□□□ 0.28
CPNE1-210ENST00000416778 DOPEY1Q5JWR5 2465 aa16.82■□□□□ 0.28
CPNE1-210ENST00000416778 H2AFYO75367 372 aaKnown RBP16.82■□□□□ 0.28
CPNE1-210ENST00000416778 CDC123O75794 336 aaPredicted RBP16.82■□□□□ 0.28
CPNE1-210ENST00000416778 FHP07954 510 aa16.82■□□□□ 0.28
CPNE1-210ENST00000416778 SERPINA6P08185 405 aa16.82■□□□□ 0.28
CPNE1-210ENST00000416778 GSTA2P09210 222 aa16.82■□□□□ 0.28
CPNE1-210ENST00000416778 C1GALT1C1LP0DN25 315 aa16.82■□□□□ 0.28
CPNE1-210ENST00000416778 GGT5P36269 586 aa16.82■□□□□ 0.28
CPNE1-210ENST00000416778 OLR1P78380 273 aa16.82■□□□□ 0.28
CPNE1-210ENST00000416778 ACTN3Q08043 901 aaPredicted RBP16.82■□□□□ 0.28
CPNE1-210ENST00000416778 C2orf54Q08AI8 447 aa16.82■□□□□ 0.28
CPNE1-210ENST00000416778 USP10Q14694 798 aaKnown RBP16.82■□□□□ 0.28
CPNE1-210ENST00000416778 ABRAXAS2Q15018 415 aa16.82■□□□□ 0.28
CPNE1-210ENST00000416778 TGFBIQ15582 683 aa16.82■□□□□ 0.28
CPNE1-210ENST00000416778 BTBD16Q32M84 506 aa16.82■□□□□ 0.28
CPNE1-210ENST00000416778 C4orf17Q53FE4 359 aa16.82■□□□□ 0.28
CPNE1-210ENST00000416778 SFT2D3Q587I9 215 aa16.82■□□□□ 0.28
CPNE1-210ENST00000416778 ABHD17BQ5VST6 288 aa16.82■□□□□ 0.28
CPNE1-210ENST00000416778 NIPAL1Q6NVV3 410 aa16.82■□□□□ 0.28
CPNE1-210ENST00000416778 ADAMTSL2Q86TH1 951 aa16.82■□□□□ 0.28
CPNE1-210ENST00000416778 UBXN10Q96LJ8 280 aa16.82■□□□□ 0.28
CPNE1-210ENST00000416778 CPNE1Q99829 537 aa16.82■□□□□ 0.28
CPNE1-210ENST00000416778 EGFL8Q99944 293 aa16.82■□□□□ 0.28
CPNE1-210ENST00000416778 SLX1AQ9BQ83 275 aa16.82■□□□□ 0.28
CPNE1-210ENST00000416778 UNKQ9C0B0 810 aaKnown RBP16.82■□□□□ 0.28
CPNE1-210ENST00000416778 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.82■□□□□ 0.285e-12■■■■□ 21.5
CPNE1-210ENST00000416778 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.82■□□□□ 0.282e-10■□□□□ 8.4
CPNE1-210ENST00000416778 CCDC166P0CW27 439 aa16.81■□□□□ 0.28
CPNE1-210ENST00000416778 GNAZP19086 355 aa16.81■□□□□ 0.28
CPNE1-210ENST00000416778 HNF4AP41235 474 aa16.81■□□□□ 0.28
CPNE1-210ENST00000416778 KCNC1P48547 511 aa16.81■□□□□ 0.28
CPNE1-210ENST00000416778 SLC12A2P55011 1212 aa16.81■□□□□ 0.28
CPNE1-210ENST00000416778 PLTPP55058 493 aa16.81■□□□□ 0.28
CPNE1-210ENST00000416778 RAB8AP61006 207 aa16.81■□□□□ 0.28
CPNE1-210ENST00000416778 BTG2P78543 158 aa16.81■□□□□ 0.28
CPNE1-210ENST00000416778 CDKL4Q5MAI5 379 aa16.81■□□□□ 0.28
CPNE1-210ENST00000416778 SYT10Q6XYQ8 523 aa16.81■□□□□ 0.28
CPNE1-210ENST00000416778 ABHD13Q7L211 337 aa16.81■□□□□ 0.28
CPNE1-210ENST00000416778 BCORP1Q8N888 145 aa16.81■□□□□ 0.28
CPNE1-210ENST00000416778 CDKL2Q92772 493 aa16.81■□□□□ 0.28
CPNE1-210ENST00000416778 TSLPQ969D9 159 aa16.81■□□□□ 0.28
CPNE1-210ENST00000416778 ZNF354BQ96LW1 612 aa16.81■□□□□ 0.28
CPNE1-210ENST00000416778 GPR22Q99680 433 aa16.81■□□□□ 0.28
CPNE1-210ENST00000416778 RBBP8Q99708 897 aa16.81■□□□□ 0.28
CPNE1-210ENST00000416778 RBCK1Q9BYM8 510 aa16.81■□□□□ 0.28
CPNE1-210ENST00000416778 MMP25Q9NPA2 562 aa16.81■□□□□ 0.28
CPNE1-210ENST00000416778 TEKT2Q9UIF3 430 aa16.81■□□□□ 0.28
CPNE1-210ENST00000416778 OR5H15A6NDH6 313 aa16.8■□□□□ 0.28
CPNE1-210ENST00000416778 URADA6NGE7 173 aa16.8■□□□□ 0.28
CPNE1-210ENST00000416778 FAM227AF5H4B4 570 aa16.8■□□□□ 0.28
CPNE1-210ENST00000416778 PHGDHO43175 533 aaKnown RBP16.8■□□□□ 0.28
CPNE1-210ENST00000416778 PRAMEF4O60810 478 aa16.8■□□□□ 0.28
CPNE1-210ENST00000416778 B4GALT2O60909 372 aa16.8■□□□□ 0.28
CPNE1-210ENST00000416778 WDR47O94967 919 aa16.8■□□□□ 0.28
CPNE1-210ENST00000416778 CD1DP15813 335 aa16.8■□□□□ 0.28
CPNE1-210ENST00000416778 SKP1P63208 163 aa16.8■□□□□ 0.28
CPNE1-210ENST00000416778 GUCY2DQ02846 1103 aa16.8■□□□□ 0.28
CPNE1-210ENST00000416778 CAV1Q03135 178 aa16.8■□□□□ 0.28
CPNE1-210ENST00000416778 ZNF33BQ06732 778 aa16.8■□□□□ 0.28
CPNE1-210ENST00000416778 EXT1Q16394 746 aa16.8■□□□□ 0.28
CPNE1-210ENST00000416778 ACER2Q5QJU3 275 aa16.8■□□□□ 0.28
CPNE1-210ENST00000416778 PRAMEF9Q5VWM5 478 aa16.8■□□□□ 0.28
CPNE1-210ENST00000416778 FCRLBQ6BAA4 426 aa16.8■□□□□ 0.28
CPNE1-210ENST00000416778 PAPD4Q6PIY7 484 aaKnown RBP16.8■□□□□ 0.28
CPNE1-210ENST00000416778 FAM180AQ6UWF9 173 aa16.8■□□□□ 0.28
CPNE1-210ENST00000416778 ZDHHC24Q6UX98 284 aa16.8■□□□□ 0.28
CPNE1-210ENST00000416778 TMPRSS11BQ86T26 416 aa16.8■□□□□ 0.28
CPNE1-210ENST00000416778 GPSM1Q86YR5 675 aa16.8■□□□□ 0.28
CPNE1-210ENST00000416778 FBXO25Q8TCJ0 367 aa16.8■□□□□ 0.28
CPNE1-210ENST00000416778 TSPAN17Q96FV3 270 aa16.8■□□□□ 0.28
CPNE1-210ENST00000416778 NPAS2Q99743 824 aa16.8■□□□□ 0.28
CPNE1-210ENST00000416778 CAPS2Q9BXY5 557 aa16.8■□□□□ 0.28
CPNE1-210ENST00000416778 NT5DC2Q9H857 520 aa16.8■□□□□ 0.28
CPNE1-210ENST00000416778 KCNK13Q9HB14 408 aa16.8■□□□□ 0.28
CPNE1-210ENST00000416778 COPG2Q9UBF2 871 aa16.8■□□□□ 0.28
CPNE1-210ENST00000416778 UTP11Q9Y3A2 253 aaKnown RBP16.8■□□□□ 0.28
CPNE1-210ENST00000416778 CENPEQ02224 2701 aa16.8■□□□□ 0.28
CPNE1-210ENST00000416778 SCN2AQ99250 2005 aa16.79■□□□□ 0.28
CPNE1-210ENST00000416778 UNC79Q9P2D8 2635 aa16.79■□□□□ 0.28
CPNE1-210ENST00000416778 NCF1BA6NI72 391 aaPredicted RBP16.79■□□□□ 0.28
CPNE1-210ENST00000416778 NCF1CA8MVU1 366 aaPredicted RBP16.79■□□□□ 0.28
CPNE1-210ENST00000416778 C4orf51C9J302 202 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms