RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 MYO1CO00159 1063 aa12.17□□□□□ -0.46
LINC00339-202ENST00000416769 DNAJB6O75190 326 aa12.17□□□□□ -0.46
LINC00339-202ENST00000416769 FKBP9O95302 570 aa12.17□□□□□ -0.46
LINC00339-202ENST00000416769 CRYABP02511 175 aaKnown RBP12.17□□□□□ -0.46
LINC00339-202ENST00000416769 C8orf89P0DMQ9 161 aa12.17□□□□□ -0.46
LINC00339-202ENST00000416769 IL1RNP18510 177 aa12.17□□□□□ -0.46
LINC00339-202ENST00000416769 RPA3P35244 121 aaPredicted RBP12.17□□□□□ -0.46
LINC00339-202ENST00000416769 SPRP35270 261 aaPredicted RBP12.17□□□□□ -0.46
LINC00339-202ENST00000416769 GP5P40197 560 aa12.17□□□□□ -0.46
LINC00339-202ENST00000416769 MSH2P43246 934 aa12.17□□□□□ -0.46
LINC00339-202ENST00000416769 MPP1Q00013 466 aa12.17□□□□□ -0.46
LINC00339-202ENST00000416769 TUBA3CQ13748 450 aa12.17□□□□□ -0.46
LINC00339-202ENST00000416769 TESK1Q15569 626 aa12.17□□□□□ -0.46
LINC00339-202ENST00000416769 BTBD16Q32M84 506 aa12.17□□□□□ -0.46
LINC00339-202ENST00000416769 RNFT1Q5M7Z0 435 aa12.17□□□□□ -0.46
LINC00339-202ENST00000416769 ZNF468Q5VIY5 522 aaPredicted RBP12.17□□□□□ -0.46
LINC00339-202ENST00000416769 ICE2Q659A1 982 aa12.17□□□□□ -0.46
LINC00339-202ENST00000416769 SPINK14Q6IE38 97 aa12.17□□□□□ -0.46
LINC00339-202ENST00000416769 TUBA3EQ6PEY2 450 aa12.17□□□□□ -0.46
LINC00339-202ENST00000416769 TTC23LQ6PF05 361 aa12.17□□□□□ -0.46
LINC00339-202ENST00000416769 RIPOR1Q6ZS17 1223 aa12.17□□□□□ -0.46
LINC00339-202ENST00000416769 VN1R4Q7Z5H5 301 aa12.17□□□□□ -0.46
LINC00339-202ENST00000416769 FGD2Q7Z6J4 655 aa12.17□□□□□ -0.46
LINC00339-202ENST00000416769 CRLF3Q8IUI8 442 aa12.17□□□□□ -0.46
LINC00339-202ENST00000416769 MDS2Q8NDY4 140 aa12.17□□□□□ -0.46
LINC00339-202ENST00000416769 OR9A1PQ8NGU1 263 aa12.17□□□□□ -0.46
LINC00339-202ENST00000416769 SLC44A1Q8WWI5 657 aa12.17□□□□□ -0.46
LINC00339-202ENST00000416769 PANX3Q96QZ0 392 aa12.17□□□□□ -0.46
LINC00339-202ENST00000416769 MCMBPQ9BTE3 642 aa12.17□□□□□ -0.46
LINC00339-202ENST00000416769 ROPN1BQ9BZX4 212 aaPredicted RBP12.17□□□□□ -0.46
LINC00339-202ENST00000416769 TGIF2Q9GZN2 237 aa12.17□□□□□ -0.46
LINC00339-202ENST00000416769 DRC3Q9H069 523 aa12.17□□□□□ -0.46
LINC00339-202ENST00000416769 RNF32Q9H0A6 362 aa12.17□□□□□ -0.46
LINC00339-202ENST00000416769 ROPN1Q9HAT0 212 aaPredicted RBP12.17□□□□□ -0.46
LINC00339-202ENST00000416769 MKKSQ9NPJ1 570 aaPredicted RBP12.17□□□□□ -0.46
LINC00339-202ENST00000416769 C14orf105Q9NVL8 296 aa12.17□□□□□ -0.46
LINC00339-202ENST00000416769 TXNDC16Q9P2K2 825 aa12.17□□□□□ -0.46
LINC00339-202ENST00000416769 CORO1CQ9ULV4 474 aaPredicted RBP12.17□□□□□ -0.46
LINC00339-202ENST00000416769 NPIPA1Q9UND3 350 aa12.17□□□□□ -0.46
LINC00339-202ENST00000416769 CRYL1Q9Y2S2 319 aa12.17□□□□□ -0.46
LINC00339-202ENST00000416769 COMMD10Q9Y6G5 202 aa12.17□□□□□ -0.46
LINC00339-202ENST00000416769 NAV3Q8IVL0 2385 aa12.16□□□□□ -0.46
LINC00339-202ENST00000416769 NF1P21359 2839 aa12.16□□□□□ -0.46
LINC00339-202ENST00000416769 EXOC1LA0A1B0GW35 172 aa12.16□□□□□ -0.46
LINC00339-202ENST00000416769 ZNF860A6NHJ4 632 aa12.16□□□□□ -0.46
LINC00339-202ENST00000416769 POC1B-GALNT4F8VUJ3 575 aa12.16□□□□□ -0.46
LINC00339-202ENST00000416769 H3BMM5 538 aa12.16□□□□□ -0.46
LINC00339-202ENST00000416769 SGK494L7N484 410 aa12.16□□□□□ -0.46
LINC00339-202ENST00000416769 DIAPH2O60879 1101 aa12.16□□□□□ -0.46
LINC00339-202ENST00000416769 PIAS1O75925 651 aa12.16□□□□□ -0.46
LINC00339-202ENST00000416769 SLC16A8O95907 504 aa12.16□□□□□ -0.46
LINC00339-202ENST00000416769 ESR1P03372 595 aa12.16□□□□□ -0.46
LINC00339-202ENST00000416769 ANXA5P08758 320 aa12.16□□□□□ -0.46
LINC00339-202ENST00000416769 PKMP14618 531 aaKnown RBP12.16□□□□□ -0.46
LINC00339-202ENST00000416769 FDXRP22570 491 aa12.16□□□□□ -0.46
LINC00339-202ENST00000416769 CD96P40200 585 aa12.16□□□□□ -0.46
LINC00339-202ENST00000416769 NR0B1P51843 470 aaKnown RBP12.16□□□□□ -0.46
LINC00339-202ENST00000416769 MINDY4Q4G0A6 757 aa12.16□□□□□ -0.46
LINC00339-202ENST00000416769 ACER2Q5QJU3 275 aa12.16□□□□□ -0.46
LINC00339-202ENST00000416769 MFSD4BQ5TF39 518 aa12.16□□□□□ -0.46
LINC00339-202ENST00000416769 ADGRD1Q6QNK2 874 aa12.16□□□□□ -0.46
LINC00339-202ENST00000416769 RPTNQ6XPR3 784 aa12.16□□□□□ -0.46
LINC00339-202ENST00000416769 ADCK2Q7Z695 626 aa12.16□□□□□ -0.46
LINC00339-202ENST00000416769 ZC3HC1Q86WB0 502 aaKnown RBP12.16□□□□□ -0.46
LINC00339-202ENST00000416769 PDSS2Q86YH6 399 aa12.16□□□□□ -0.46
LINC00339-202ENST00000416769 LRRC56Q8IYG6 542 aaPredicted RBP12.16□□□□□ -0.46
LINC00339-202ENST00000416769 ZCCHC10Q8TBK6 192 aa12.16□□□□□ -0.46
LINC00339-202ENST00000416769 ZNF480Q8WV37 535 aa12.16□□□□□ -0.46
LINC00339-202ENST00000416769 SMPDL3AQ92484 453 aa12.16□□□□□ -0.46
LINC00339-202ENST00000416769 TSLPQ969D9 159 aa12.16□□□□□ -0.46
LINC00339-202ENST00000416769 GPR137Q96N19 417 aa12.16□□□□□ -0.46
LINC00339-202ENST00000416769 RBBP8Q99708 897 aa12.16□□□□□ -0.46
LINC00339-202ENST00000416769 RHOJQ9H4E5 214 aa12.16□□□□□ -0.46
LINC00339-202ENST00000416769 CHST11Q9NPF2 352 aa12.16□□□□□ -0.46
LINC00339-202ENST00000416769 ZNF180Q9UJW8 692 aa12.16□□□□□ -0.46
LINC00339-202ENST00000416769 ZNF835Q9Y2P0 537 aa12.16□□□□□ -0.46
LINC00339-202ENST00000416769 MED16Q9Y2X0 877 aa12.16□□□□□ -0.46
LINC00339-202ENST00000416769 PSAT1Q9Y617 370 aa12.16□□□□□ -0.46
LINC00339-202ENST00000416769 IKBKGQ9Y6K9 419 aa12.16□□□□□ -0.46
LINC00339-202ENST00000416769 E7ENX8 843 aa12.15□□□□□ -0.46
LINC00339-202ENST00000416769 H7BY64 318 aa12.15□□□□□ -0.46
LINC00339-202ENST00000416769 PSIP1O75475 530 aaKnown RBP12.15□□□□□ -0.46
LINC00339-202ENST00000416769 CDC123O75794 336 aaPredicted RBP12.15□□□□□ -0.46
LINC00339-202ENST00000416769 B3GALT4O96024 378 aa12.15□□□□□ -0.46
LINC00339-202ENST00000416769 SHBGP04278 402 aa12.15□□□□□ -0.46
LINC00339-202ENST00000416769 INHBAP08476 426 aa12.15□□□□□ -0.46
LINC00339-202ENST00000416769 GCAP28676 217 aa12.15□□□□□ -0.46
LINC00339-202ENST00000416769 CCNFP41002 786 aa12.15□□□□□ -0.46
LINC00339-202ENST00000416769 SERPINB9P50453 376 aa12.15□□□□□ -0.46
LINC00339-202ENST00000416769 PNLIPRP1P54315 467 aa12.15□□□□□ -0.46
LINC00339-202ENST00000416769 EMP3P54852 163 aa12.15□□□□□ -0.46
LINC00339-202ENST00000416769 TAP2Q03519 686 aa12.15□□□□□ -0.46
LINC00339-202ENST00000416769 EFTUD2Q15029 972 aaKnown RBP eCLIP12.15□□□□□ -0.46
LINC00339-202ENST00000416769 RASA2Q15283 850 aa12.15□□□□□ -0.46
LINC00339-202ENST00000416769 OR1C1Q15619 314 aa12.15□□□□□ -0.46
LINC00339-202ENST00000416769 LGSNQ5TDP6 509 aa12.15□□□□□ -0.46
LINC00339-202ENST00000416769 CPEB2Q7Z5Q1 589 aaKnown RBP12.15□□□□□ -0.46
LINC00339-202ENST00000416769 ANKRD37Q7Z713 158 aa12.15□□□□□ -0.46
LINC00339-202ENST00000416769 TDRPQ86YL5 185 aa12.15□□□□□ -0.46
LINC00339-202ENST00000416769 SIAH3Q8IW03 269 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms