RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 EGFL8Q99944 293 aa16.56■□□□□ 0.24
PDLIM2-208ENST00000416159 MMP25Q9NPA2 562 aa16.56■□□□□ 0.24
PDLIM2-208ENST00000416159 ABI3Q9P2A4 366 aa16.56■□□□□ 0.24
PDLIM2-208ENST00000416159 SLC22A14Q9Y267 594 aa16.56■□□□□ 0.24
PDLIM2-208ENST00000416159 A0A1B0GUH1 482 aa16.55■□□□□ 0.24
PDLIM2-208ENST00000416159 PRAMEF2O60811 474 aa16.55■□□□□ 0.24
PDLIM2-208ENST00000416159 H2AFYO75367 372 aaKnown RBP16.55■□□□□ 0.24
PDLIM2-208ENST00000416159 CDC123O75794 336 aaPredicted RBP16.55■□□□□ 0.24
PDLIM2-208ENST00000416159 RASAL1O95294 804 aa16.55■□□□□ 0.24
PDLIM2-208ENST00000416159 CLDN1O95832 211 aa16.55■□□□□ 0.24
PDLIM2-208ENST00000416159 STSP08842 583 aa16.55■□□□□ 0.24
PDLIM2-208ENST00000416159 ZNF888P0CJ79 500 aaPredicted RBP16.55■□□□□ 0.24
PDLIM2-208ENST00000416159 TDGF1P3P51864 188 aa16.55■□□□□ 0.24
PDLIM2-208ENST00000416159 OR4D2P58180 307 aa16.55■□□□□ 0.24
PDLIM2-208ENST00000416159 POU4F1Q01851 419 aa16.55■□□□□ 0.24
PDLIM2-208ENST00000416159 CALCOCO2Q13137 446 aa16.55■□□□□ 0.24
PDLIM2-208ENST00000416159 ZNF460Q14592 562 aa16.55■□□□□ 0.24
PDLIM2-208ENST00000416159 RBBP5Q15291 538 aaKnown RBP16.55■□□□□ 0.24
PDLIM2-208ENST00000416159 MEP1AQ16819 746 aa16.55■□□□□ 0.24
PDLIM2-208ENST00000416159 ACER2Q5QJU3 275 aa16.55■□□□□ 0.24
PDLIM2-208ENST00000416159 FRA10AC1Q70Z53 315 aa16.55■□□□□ 0.24
PDLIM2-208ENST00000416159 MAATS1Q7Z4T9 603 aa16.55■□□□□ 0.24
PDLIM2-208ENST00000416159 TMPRSS11BQ86T26 416 aa16.55■□□□□ 0.24
PDLIM2-208ENST00000416159 ANKRD53Q8N9V6 530 aa16.55■□□□□ 0.24
PDLIM2-208ENST00000416159 UTP15Q8TED0 518 aaKnown RBP16.55■□□□□ 0.24
PDLIM2-208ENST00000416159 ANKRD49Q8WVL7 239 aa16.55■□□□□ 0.24
PDLIM2-208ENST00000416159 CDKL2Q92772 493 aa16.55■□□□□ 0.24
PDLIM2-208ENST00000416159 ERP44Q9BS26 406 aa16.55■□□□□ 0.24
PDLIM2-208ENST00000416159 MCMBPQ9BTE3 642 aa16.55■□□□□ 0.24
PDLIM2-208ENST00000416159 RBCK1Q9BYM8 510 aa16.55■□□□□ 0.24
PDLIM2-208ENST00000416159 SLC6A16Q9GZN6 736 aa16.55■□□□□ 0.24
PDLIM2-208ENST00000416159 GPAMQ9HCL2 828 aa16.55■□□□□ 0.24
PDLIM2-208ENST00000416159 WHRNQ9P202 907 aa16.55■□□□□ 0.24
PDLIM2-208ENST00000416159 PYCARDQ9ULZ3 195 aa16.55■□□□□ 0.24
PDLIM2-208ENST00000416159 CACNA1DQ01668 2161 aa16.54■□□□□ 0.24
PDLIM2-208ENST00000416159 EIF3HO15372 352 aaKnown RBP eCLIP16.54■□□□□ 0.24
PDLIM2-208ENST00000416159 SERPINA6P08185 405 aa16.54■□□□□ 0.24
PDLIM2-208ENST00000416159 TAS2R50P59544 299 aa16.54■□□□□ 0.24
PDLIM2-208ENST00000416159 OLR1P78380 273 aa16.54■□□□□ 0.24
PDLIM2-208ENST00000416159 USP10Q14694 798 aaKnown RBP16.54■□□□□ 0.24
PDLIM2-208ENST00000416159 CEP97Q8IW35 865 aa16.54■□□□□ 0.24
PDLIM2-208ENST00000416159 KLHDC8AQ8IYD2 350 aa16.54■□□□□ 0.24
PDLIM2-208ENST00000416159 TSLPQ969D9 159 aa16.54■□□□□ 0.24
PDLIM2-208ENST00000416159 DERL2Q9GZP9 239 aa16.54■□□□□ 0.24
PDLIM2-208ENST00000416159 SMYD2Q9NRG4 433 aa16.54■□□□□ 0.24
PDLIM2-208ENST00000416159 PCDHGB6Q9Y5F9 930 aa16.54■□□□□ 0.24
PDLIM2-208ENST00000416159 B4GALT2O60909 372 aa16.53■□□□□ 0.24
PDLIM2-208ENST00000416159 DNAJB6O75190 326 aa16.53■□□□□ 0.24
PDLIM2-208ENST00000416159 B3GALT4O96024 378 aa16.53■□□□□ 0.24
PDLIM2-208ENST00000416159 SMIM10L1P0DMW3 83 aa16.53■□□□□ 0.24
PDLIM2-208ENST00000416159 C1GALT1C1LP0DN25 315 aa16.53■□□□□ 0.24
PDLIM2-208ENST00000416159 GNAZP19086 355 aa16.53■□□□□ 0.24
PDLIM2-208ENST00000416159 HNF4AP41235 474 aa16.53■□□□□ 0.24
PDLIM2-208ENST00000416159 RAB8AP61006 207 aa16.53■□□□□ 0.24
PDLIM2-208ENST00000416159 TSNQ15631 228 aaKnown RBP16.53■□□□□ 0.24
PDLIM2-208ENST00000416159 ZNF766Q5HY98 468 aa16.53■□□□□ 0.24
PDLIM2-208ENST00000416159 FCRLBQ6BAA4 426 aa16.53■□□□□ 0.24
PDLIM2-208ENST00000416159 MYO7BQ6PIF6 2116 aa16.53■□□□□ 0.24
PDLIM2-208ENST00000416159 GFRALQ6UXV0 394 aa16.53■□□□□ 0.24
PDLIM2-208ENST00000416159 QSOX2Q6ZRP7 698 aa16.53■□□□□ 0.24
PDLIM2-208ENST00000416159 CAPN12Q6ZSI9 719 aa16.53■□□□□ 0.24
PDLIM2-208ENST00000416159 CYS1Q717R9 158 aa16.53■□□□□ 0.24
PDLIM2-208ENST00000416159 CRLF3Q8IUI8 442 aa16.53■□□□□ 0.24
PDLIM2-208ENST00000416159 BEST3Q8N1M1 668 aa16.53■□□□□ 0.24
PDLIM2-208ENST00000416159 SLC5A8Q8N695 610 aa16.53■□□□□ 0.24
PDLIM2-208ENST00000416159 TTLQ8NG68 377 aa16.53■□□□□ 0.24
PDLIM2-208ENST00000416159 CREB3L4Q8TEY5 395 aa16.53■□□□□ 0.24
PDLIM2-208ENST00000416159 RHBDF1Q96CC6 855 aa16.53■□□□□ 0.24
PDLIM2-208ENST00000416159 TSPAN17Q96FV3 270 aa16.53■□□□□ 0.24
PDLIM2-208ENST00000416159 SMIM10Q96HG1 83 aa16.53■□□□□ 0.24
PDLIM2-208ENST00000416159 PTCHD1Q96NR3 888 aa16.53■□□□□ 0.24
PDLIM2-208ENST00000416159 CAPS2Q9BXY5 557 aa16.53■□□□□ 0.24
PDLIM2-208ENST00000416159 DPH5Q9H2P9 285 aa16.53■□□□□ 0.24
PDLIM2-208ENST00000416159 SAYSD1Q9NPB0 183 aa16.53■□□□□ 0.24
PDLIM2-208ENST00000416159 TXNDC16Q9P2K2 825 aa16.53■□□□□ 0.24
PDLIM2-208ENST00000416159 PSMD12O00232 456 aaPredicted RBP16.52■□□□□ 0.24
PDLIM2-208ENST00000416159 CDK2AP1O14519 115 aa16.52■□□□□ 0.24
PDLIM2-208ENST00000416159 FANCGO15287 622 aa16.52■□□□□ 0.24
PDLIM2-208ENST00000416159 PRMT3O60678 531 aa16.52■□□□□ 0.24
PDLIM2-208ENST00000416159 WDR47O94967 919 aa16.52■□□□□ 0.24
PDLIM2-208ENST00000416159 RNH1P13489 461 aaKnown RBP16.52■□□□□ 0.24
PDLIM2-208ENST00000416159 SSTR1P30872 391 aa16.52■□□□□ 0.24
PDLIM2-208ENST00000416159 SLC6A12P48065 614 aa16.52■□□□□ 0.24
PDLIM2-208ENST00000416159 SLC26A5P58743 744 aa16.52■□□□□ 0.24
PDLIM2-208ENST00000416159 STXBP1P61764 594 aaKnown RBP16.52■□□□□ 0.24
PDLIM2-208ENST00000416159 MRPS25P82663 173 aaKnown RBP16.52■□□□□ 0.24
PDLIM2-208ENST00000416159 HYAL2Q12891 473 aa16.52■□□□□ 0.24
PDLIM2-208ENST00000416159 TUBA3CQ13748 450 aa16.52■□□□□ 0.24
PDLIM2-208ENST00000416159 TOR1AIP1Q5JTV8 583 aa16.52■□□□□ 0.24
PDLIM2-208ENST00000416159 TUBA3EQ6PEY2 450 aa16.52■□□□□ 0.24
PDLIM2-208ENST00000416159 SLCO4C1Q6ZQN7 724 aa16.52■□□□□ 0.24
PDLIM2-208ENST00000416159 LGI4Q8N135 537 aa16.52■□□□□ 0.24
PDLIM2-208ENST00000416159 TCAIMQ8N3R3 496 aa16.52■□□□□ 0.24
PDLIM2-208ENST00000416159 SPATA4Q8NEY3 305 aa16.52■□□□□ 0.24
PDLIM2-208ENST00000416159 CPNE1Q99829 537 aa16.52■□□□□ 0.24
PDLIM2-208ENST00000416159 UTP23Q9BRU9 249 aaKnown RBP16.52■□□□□ 0.24
PDLIM2-208ENST00000416159 KLHL31Q9H511 634 aa16.52■□□□□ 0.24
PDLIM2-208ENST00000416159 MTO1Q9Y2Z2 717 aaKnown RBP16.52■□□□□ 0.24
PDLIM2-208ENST00000416159 CTAGE15A4D2H0 777 aa16.51■□□□□ 0.23
PDLIM2-208ENST00000416159 WISP3O95389 354 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms