RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 LCTLQ6UWM7 567 aa14.41□□□□□ -0.1
DDX56-202ENST00000415758 QSOX2Q6ZRP7 698 aa14.41□□□□□ -0.1
DDX56-202ENST00000415758 PIWIL4Q7Z3Z4 852 aaKnown RBP14.41□□□□□ -0.1
DDX56-202ENST00000415758 SPNS2Q8IVW8 549 aa14.41□□□□□ -0.1
DDX56-202ENST00000415758 DENND6AQ8IWF6 608 aa14.41□□□□□ -0.1
DDX56-202ENST00000415758 SULF2Q8IWU5 870 aa14.41□□□□□ -0.1
DDX56-202ENST00000415758 DMRTC2Q8IXT2 367 aaPredicted RBP14.41□□□□□ -0.1
DDX56-202ENST00000415758 LMNTD2Q8IXW0 634 aa14.41□□□□□ -0.1
DDX56-202ENST00000415758 ZFP62Q8NB50 900 aaPredicted RBP14.41□□□□□ -0.1
DDX56-202ENST00000415758 NFAM1Q8NET5 270 aaPredicted RBP14.41□□□□□ -0.1
DDX56-202ENST00000415758 ABHD11Q8NFV4 315 aa14.41□□□□□ -0.1
DDX56-202ENST00000415758 OR4K1Q8NGD4 311 aa14.41□□□□□ -0.1
DDX56-202ENST00000415758 GPR21Q99679 349 aa14.41□□□□□ -0.1
DDX56-202ENST00000415758 SGPP1Q9BX95 441 aa14.41□□□□□ -0.1
DDX56-202ENST00000415758 RBCK1Q9BYM8 510 aa14.41□□□□□ -0.1
DDX56-202ENST00000415758 CCDC68Q9H2F9 335 aa14.41□□□□□ -0.1
DDX56-202ENST00000415758 CLK4Q9HAZ1 481 aaKnown RBP14.41□□□□□ -0.1
DDX56-202ENST00000415758 KCNN3Q9UGI6 736 aa14.41□□□□□ -0.1
DDX56-202ENST00000415758 NIPBLQ6KC79 2804 aaeCLIP14.41□□□□□ -0.1
DDX56-202ENST00000415758 PHF3Q92576 2039 aaKnown RBP14.41□□□□□ -0.1
DDX56-202ENST00000415758 FAM221AA4D161 298 aa14.4□□□□□ -0.1
DDX56-202ENST00000415758 ZNF860A6NHJ4 632 aa14.4□□□□□ -0.1
DDX56-202ENST00000415758 SAGE2PA6NJ88 616 aa14.4□□□□□ -0.1
DDX56-202ENST00000415758 FCHO1O14526 889 aa14.4□□□□□ -0.1
DDX56-202ENST00000415758 TFECO14948 347 aaPredicted RBP14.4□□□□□ -0.1
DDX56-202ENST00000415758 CHST10O43529 356 aa14.4□□□□□ -0.1
DDX56-202ENST00000415758 DNAJB6O75190 326 aa14.4□□□□□ -0.1
DDX56-202ENST00000415758 ALOX12P18054 663 aa14.4□□□□□ -0.1
DDX56-202ENST00000415758 TFEBP19484 476 aa14.4□□□□□ -0.1
DDX56-202ENST00000415758 MSX1P28360 303 aa14.4□□□□□ -0.1
DDX56-202ENST00000415758 MEOX1P50221 254 aa14.4□□□□□ -0.1
DDX56-202ENST00000415758 ART1P52961 327 aa14.4□□□□□ -0.1
DDX56-202ENST00000415758 SKP1P63208 163 aa14.4□□□□□ -0.1
DDX56-202ENST00000415758 SARNPP82979 210 aaKnown RBP14.4□□□□□ -0.1
DDX56-202ENST00000415758 DHX34Q14147 1143 aaKnown RBP14.4□□□□□ -0.1
DDX56-202ENST00000415758 LRRC8EQ6NSJ5 796 aa14.4□□□□□ -0.1
DDX56-202ENST00000415758 AGTRAPQ6RW13 159 aa14.4□□□□□ -0.1
DDX56-202ENST00000415758 KIAA0408Q6ZU52 694 aa14.4□□□□□ -0.1
DDX56-202ENST00000415758 CEP128Q6ZU80 1094 aa14.4□□□□□ -0.1
DDX56-202ENST00000415758 GSTA5Q7RTV2 222 aa14.4□□□□□ -0.1
DDX56-202ENST00000415758 STRA8Q7Z7C7 330 aa14.4□□□□□ -0.1
DDX56-202ENST00000415758 CD163Q86VB7 1156 aa14.4□□□□□ -0.1
DDX56-202ENST00000415758 CAND1Q86VP6 1230 aaKnown RBP14.4□□□□□ -0.1
DDX56-202ENST00000415758 CPNE9Q8IYJ1 553 aa14.4□□□□□ -0.1
DDX56-202ENST00000415758 ZNF740Q8NDX6 193 aa14.4□□□□□ -0.1
DDX56-202ENST00000415758 RND1Q92730 232 aa14.4□□□□□ -0.1
DDX56-202ENST00000415758 PTCHD1Q96NR3 888 aa14.4□□□□□ -0.1
DDX56-202ENST00000415758 DESI2Q9BSY9 194 aa14.4□□□□□ -0.1
DDX56-202ENST00000415758 TMUB1Q9BVT8 246 aa14.4□□□□□ -0.1
DDX56-202ENST00000415758 TP63Q9H3D4 680 aaPredicted RBP14.4□□□□□ -0.1
DDX56-202ENST00000415758 PARVBQ9HBI1 364 aa14.4□□□□□ -0.1
DDX56-202ENST00000415758 FBXO6Q9NRD1 293 aaPredicted RBP14.4□□□□□ -0.1
DDX56-202ENST00000415758 PDE10AQ9Y233 779 aa14.4□□□□□ -0.1
DDX56-202ENST00000415758 RNF6Q9Y252 685 aa14.4□□□□□ -0.1
DDX56-202ENST00000415758 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.39□□□□□ -0.11
DDX56-202ENST00000415758 IGKV3D-11A0A0A0MRZ8 115 aa14.39□□□□□ -0.11
DDX56-202ENST00000415758 ZCWPW2A0A1B0GU75 182 aa14.39□□□□□ -0.11
DDX56-202ENST00000415758 TCRBV16S1A1N1A0A5B0 115 aa14.39□□□□□ -0.11
DDX56-202ENST00000415758 PEX1O43933 1283 aa14.39□□□□□ -0.11
DDX56-202ENST00000415758 HS6ST1O60243 411 aa14.39□□□□□ -0.11
DDX56-202ENST00000415758 PRMT3O60678 531 aa14.39□□□□□ -0.11
DDX56-202ENST00000415758 C8GP07360 202 aa14.39□□□□□ -0.11
DDX56-202ENST00000415758 HOXD4P09016 255 aaPredicted RBP14.39□□□□□ -0.11
DDX56-202ENST00000415758 CDH1P12830 882 aa14.39□□□□□ -0.11
DDX56-202ENST00000415758 MLNP12872 115 aa14.39□□□□□ -0.11
DDX56-202ENST00000415758 NAE1Q13564 534 aa14.39□□□□□ -0.11
DDX56-202ENST00000415758 THOC5Q13769 683 aaKnown RBP14.39□□□□□ -0.11
DDX56-202ENST00000415758 DEFB134Q4QY38 66 aa14.39□□□□□ -0.11
DDX56-202ENST00000415758 ARHGAP11AQ6P4F7 1023 aa14.39□□□□□ -0.11
DDX56-202ENST00000415758 HAUS8Q9BT25 410 aa14.39□□□□□ -0.11
DDX56-202ENST00000415758 DEFB126Q9BYW3 111 aa14.39□□□□□ -0.11
DDX56-202ENST00000415758 UCK2Q9BZX2 261 aa14.39□□□□□ -0.11
DDX56-202ENST00000415758 ATG10Q9H0Y0 220 aa14.39□□□□□ -0.11
DDX56-202ENST00000415758 SLC24A3Q9HC58 644 aa14.39□□□□□ -0.11
DDX56-202ENST00000415758 KCNJ16Q9NPI9 418 aa14.39□□□□□ -0.11
DDX56-202ENST00000415758 ADAMTS6Q9UKP5 1117 aa14.39□□□□□ -0.11
DDX56-202ENST00000415758 ZNF407Q9C0G0 2248 aa14.38□□□□□ -0.11
DDX56-202ENST00000415758 NKX2-6A6NCS4 301 aa14.38□□□□□ -0.11
DDX56-202ENST00000415758 SDR42E2A6NKP2 422 aa14.38□□□□□ -0.11
DDX56-202ENST00000415758 SLC16A5O15375 505 aa14.38□□□□□ -0.11
DDX56-202ENST00000415758 NDUFS4O43181 175 aa14.38□□□□□ -0.11
DDX56-202ENST00000415758 CEP104O60308 925 aa14.38□□□□□ -0.11
DDX56-202ENST00000415758 F7P08709 466 aaPredicted RBP14.38□□□□□ -0.11
DDX56-202ENST00000415758 DNAJA1P31689 397 aaKnown RBP14.38□□□□□ -0.11
DDX56-202ENST00000415758 SLC1A2P43004 574 aa14.38□□□□□ -0.11
DDX56-202ENST00000415758 KCNJ1P48048 391 aa14.38□□□□□ -0.11
DDX56-202ENST00000415758 BTG2P78543 158 aa14.38□□□□□ -0.11
DDX56-202ENST00000415758 SP140Q13342 867 aa14.38□□□□□ -0.11
DDX56-202ENST00000415758 EMC4Q5J8M3 183 aa14.38□□□□□ -0.11
DDX56-202ENST00000415758 CES4AQ5XG92 561 aa14.38□□□□□ -0.11
DDX56-202ENST00000415758 CASC4Q6P4E1 433 aa14.38□□□□□ -0.11
DDX56-202ENST00000415758 APCDD1LQ8NCL9 501 aa14.38□□□□□ -0.11
DDX56-202ENST00000415758 NT5CQ8TCD5 201 aa14.38□□□□□ -0.11
DDX56-202ENST00000415758 MAIP1Q8WWC4 291 aa14.38□□□□□ -0.11
DDX56-202ENST00000415758 ZNF669Q96BR6 464 aaPredicted RBP14.38□□□□□ -0.11
DDX56-202ENST00000415758 ZNF559Q9BR84 538 aa14.38□□□□□ -0.11
DDX56-202ENST00000415758 AARSD1Q9BTE6 412 aaKnown RBP14.38□□□□□ -0.11
DDX56-202ENST00000415758 CXXC4Q9H2H0 198 aa14.38□□□□□ -0.11
DDX56-202ENST00000415758 SAMD15Q9P1V8 674 aa14.38□□□□□ -0.11
DDX56-202ENST00000415758 DNAJC13O75165 2243 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms