RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 CDH3P22223 829 aa11.13□□□□□ -0.63
RFFL-205ENST00000415395 ELK4P28324 431 aa11.13□□□□□ -0.63
RFFL-205ENST00000415395 IL12AP29459 219 aa11.13□□□□□ -0.63
RFFL-205ENST00000415395 CD6P30203 668 aa11.13□□□□□ -0.63
RFFL-205ENST00000415395 RYKP34925 604 aa11.13□□□□□ -0.63
RFFL-205ENST00000415395 CLCNKAP51800 687 aa11.13□□□□□ -0.63
RFFL-205ENST00000415395 BMXP51813 675 aa11.13□□□□□ -0.63
RFFL-205ENST00000415395 ARHGDIAP52565 204 aa11.13□□□□□ -0.63
RFFL-205ENST00000415395 MTPNP58546 118 aa11.13□□□□□ -0.63
RFFL-205ENST00000415395 E2F2Q14209 437 aa11.13□□□□□ -0.63
RFFL-205ENST00000415395 TRIM16LQ309B1 348 aa11.13□□□□□ -0.63
RFFL-205ENST00000415395 ATG9BQ674R7 924 aa11.13□□□□□ -0.63
RFFL-205ENST00000415395 CAPN13Q6MZZ7 669 aaPredicted RBP11.13□□□□□ -0.63
RFFL-205ENST00000415395 TRIM46Q7Z4K8 759 aa11.13□□□□□ -0.63
RFFL-205ENST00000415395 R3HCC1LQ7Z5L2 792 aaKnown RBP11.13□□□□□ -0.63
RFFL-205ENST00000415395 THOC6Q86W42 341 aaKnown RBP11.13□□□□□ -0.63
RFFL-205ENST00000415395 ZC3H7AQ8IWR0 971 aaKnown RBP11.13□□□□□ -0.63
RFFL-205ENST00000415395 SPARTQ8N0X7 666 aa11.13□□□□□ -0.63
RFFL-205ENST00000415395 ZCCHC7Q8N3Z6 543 aaKnown RBP11.13□□□□□ -0.63
RFFL-205ENST00000415395 TMEM145Q8NBT3 493 aa11.13□□□□□ -0.63
RFFL-205ENST00000415395 FLCNQ8NFG4 579 aa11.13□□□□□ -0.63
RFFL-205ENST00000415395 OR5K2Q8NHB8 316 aa11.13□□□□□ -0.63
RFFL-205ENST00000415395 TFGQ92734 400 aaPredicted RBP11.13□□□□□ -0.63
RFFL-205ENST00000415395 USP7Q93009 1102 aa11.13□□□□□ -0.63
RFFL-205ENST00000415395 MUL1Q969V5 352 aa11.13□□□□□ -0.63
RFFL-205ENST00000415395 WDR92Q96MX6 357 aa11.13□□□□□ -0.63
RFFL-205ENST00000415395 DPY30Q9C005 99 aa11.13□□□□□ -0.63
RFFL-205ENST00000415395 ATG10Q9H0Y0 220 aa11.13□□□□□ -0.63
RFFL-205ENST00000415395 PCED1AQ9H1Q7 454 aa11.13□□□□□ -0.63
RFFL-205ENST00000415395 CHRDQ9H2X0 955 aa11.13□□□□□ -0.63
RFFL-205ENST00000415395 RMND5AQ9H871 391 aa11.13□□□□□ -0.63
RFFL-205ENST00000415395 CD93Q9NPY3 652 aa11.13□□□□□ -0.63
RFFL-205ENST00000415395 ATAD3AQ9NVI7 634 aa11.13□□□□□ -0.63
RFFL-205ENST00000415395 WSB2Q9NYS7 404 aaPredicted RBP11.13□□□□□ -0.63
RFFL-205ENST00000415395 SPATA7Q9P0W8 599 aa11.13□□□□□ -0.63
RFFL-205ENST00000415395 SNX6Q9UNH7 406 aa11.13□□□□□ -0.63
RFFL-205ENST00000415395 SLC22A14Q9Y267 594 aa11.13□□□□□ -0.63
RFFL-205ENST00000415395 ASF1AQ9Y294 204 aa11.13□□□□□ -0.63
RFFL-205ENST00000415395 PRKAB1Q9Y478 270 aa11.13□□□□□ -0.63
RFFL-205ENST00000415395 POLR3HQ9Y535 204 aaPredicted RBP11.13□□□□□ -0.63
RFFL-205ENST00000415395 HSPE1-MOB4S4R3N1 261 aa11.13□□□□□ -0.63
RFFL-205ENST00000415395 FUOMA2VDF0 154 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 POM121BA6NF01 834 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 NPIPB8E9PQR5 432 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 UPK1AO00322 258 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 CXCR6O00574 342 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 UGT2B11O75310 529 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 ULK1O75385 1050 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 E2F6O75461 281 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 RSL1D1O76021 490 aaKnown RBP11.12□□□□□ -0.63
RFFL-205ENST00000415395 ERGP11308 486 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 ZNF182P17025 639 aaPredicted RBP11.12□□□□□ -0.63
RFFL-205ENST00000415395 MATN1P21941 496 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 IDSP22304 550 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 GRK3P35626 688 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 HNF4AP41235 474 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 YAP1P46937 504 aaKnown RBP11.12□□□□□ -0.63
RFFL-205ENST00000415395 RABIFP47224 123 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 PNLIPRP1P54315 467 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 RELAQ04206 551 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 NAE1Q13564 534 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 GAS6Q14393 721 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 IMPG1Q17R60 797 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 C10orf62Q5T681 223 aaPredicted RBP11.12□□□□□ -0.63
RFFL-205ENST00000415395 GALNT18Q6P9A2 607 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 TBPL2Q6SJ96 375 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 SCIMPQ6UWF3 145 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 GCNT7Q6ZNI0 430 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 Q6ZSR9 355 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 CHST15Q7LFX5 561 aaPredicted RBP11.12□□□□□ -0.63
RFFL-205ENST00000415395 ANKRD13BQ86YJ7 626 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 PARP8Q8N3A8 854 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 TMCO5AQ8N6Q1 288 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 PIK3C3Q8NEB9 887 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 ZNF548Q8NEK5 533 aaPredicted RBP11.12□□□□□ -0.63
RFFL-205ENST00000415395 SETD7Q8WTS6 366 aaKnown RBP11.12□□□□□ -0.63
RFFL-205ENST00000415395 ZNF480Q8WV37 535 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 ZNF566Q969W8 418 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 CLDN23Q96B33 292 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 TOE1Q96GM8 510 aaKnown RBP11.12□□□□□ -0.63
RFFL-205ENST00000415395 BMFQ96LC9 184 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 OR2M4Q96R27 311 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 NODALQ96S42 347 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 IER2Q9BTL4 223 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 SGPP1Q9BX95 441 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 TRIM8Q9BZR9 551 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 LHPPQ9H008 270 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 TRIT1Q9H3H1 467 aaKnown RBP11.12□□□□□ -0.63
RFFL-205ENST00000415395 EPS8L2Q9H6S3 715 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 ANKHQ9HCJ1 492 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 CCNB1IP1Q9NPC3 277 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 ENPP5Q9UJA9 477 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 WDR37Q9Y2I8 494 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 TPRKBQ9Y3C4 175 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 KCNE2Q9Y6J6 123 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 KCNE1BA0A087WTH5 132 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 MANBAO00462 879 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 PI15O43692 258 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 ERN1O75460 977 aaKnown RBP11.12□□□□□ -0.63
RFFL-205ENST00000415395 SULT1C4O75897 302 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms