RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 TTC27Q6P3X3 843 aa18.13■□□□□ 0.49
UBXN4-202ENST00000415164 DOLPP1Q86YN1 238 aa18.13■□□□□ 0.49
UBXN4-202ENST00000415164 MAGOHBQ96A72 148 aaKnown RBP18.13■□□□□ 0.49
UBXN4-202ENST00000415164 LINGO1Q96FE5 620 aa18.13■□□□□ 0.49
UBXN4-202ENST00000415164 TRIM51Q9BSJ1 452 aa18.13■□□□□ 0.49
UBXN4-202ENST00000415164 COQ3Q9NZJ6 369 aa18.13■□□□□ 0.49
UBXN4-202ENST00000415164 SCN2AQ99250 2005 aa18.13■□□□□ 0.49
UBXN4-202ENST00000415164 DCHS2Q6V1P9 2916 aa18.12■□□□□ 0.49
UBXN4-202ENST00000415164 EIF3FO00303 357 aaPredicted RBP18.12■□□□□ 0.49
UBXN4-202ENST00000415164 NME2P1O60361 137 aa18.12■□□□□ 0.49
UBXN4-202ENST00000415164 GALR3O60755 368 aaPredicted RBP18.12■□□□□ 0.49
UBXN4-202ENST00000415164 TPOP07202 933 aa18.12■□□□□ 0.49
UBXN4-202ENST00000415164 ALOX12P18054 663 aa18.12■□□□□ 0.49
UBXN4-202ENST00000415164 NME2P22392 152 aa18.12■□□□□ 0.49
UBXN4-202ENST00000415164 CDC25BP30305 580 aa18.12■□□□□ 0.49
UBXN4-202ENST00000415164 MAGEA6P43360 314 aa18.12■□□□□ 0.49
UBXN4-202ENST00000415164 ITGA8P53708 1063 aa18.12■□□□□ 0.49
UBXN4-202ENST00000415164 SKP1P63208 163 aa18.12■□□□□ 0.49
UBXN4-202ENST00000415164 RGS1Q08116 209 aa18.12■□□□□ 0.49
UBXN4-202ENST00000415164 HYAL2Q12891 473 aa18.12■□□□□ 0.49
UBXN4-202ENST00000415164 SP140Q13342 867 aa18.12■□□□□ 0.49
UBXN4-202ENST00000415164 PHKG1Q16816 387 aa18.12■□□□□ 0.49
UBXN4-202ENST00000415164 RNFT1Q5M7Z0 435 aa18.12■□□□□ 0.49
UBXN4-202ENST00000415164 ARMC3Q5W041 872 aa18.12■□□□□ 0.49
UBXN4-202ENST00000415164 PAQR3Q6TCH7 311 aa18.12■□□□□ 0.49
UBXN4-202ENST00000415164 PCGF5Q86SE9 256 aa18.12■□□□□ 0.49
UBXN4-202ENST00000415164 CDH24Q86UP0 819 aa18.12■□□□□ 0.49
UBXN4-202ENST00000415164 LMNTD2Q8IXW0 634 aa18.12■□□□□ 0.49
UBXN4-202ENST00000415164 EID3Q8N140 333 aa18.12■□□□□ 0.49
UBXN4-202ENST00000415164 TBC1D19Q8N5T2 526 aa18.12■□□□□ 0.49
UBXN4-202ENST00000415164 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.12■□□□□ 0.49
UBXN4-202ENST00000415164 HAUS8Q9BT25 410 aa18.12■□□□□ 0.49
UBXN4-202ENST00000415164 FAM129AQ9BZQ8 928 aa18.12■□□□□ 0.49
UBXN4-202ENST00000415164 ARL15Q9NXU5 204 aa18.12■□□□□ 0.49
UBXN4-202ENST00000415164 TAS2R13Q9NYV9 303 aa18.12■□□□□ 0.49
UBXN4-202ENST00000415164 F8P00451 2351 aa18.11■□□□□ 0.49
UBXN4-202ENST00000415164 POLQO75417 2590 aa18.11■□□□□ 0.49
UBXN4-202ENST00000415164 CELSR1Q9NYQ6 3014 aa18.11■□□□□ 0.49
UBXN4-202ENST00000415164 E9PLN8 166 aa18.11■□□□□ 0.49
UBXN4-202ENST00000415164 PSMD12O00232 456 aaPredicted RBP18.11■□□□□ 0.49
UBXN4-202ENST00000415164 FCHO1O14526 889 aa18.11■□□□□ 0.49
UBXN4-202ENST00000415164 PRMT3O60678 531 aa18.11■□□□□ 0.49
UBXN4-202ENST00000415164 GUCA1CO95843 209 aa18.11■□□□□ 0.49
UBXN4-202ENST00000415164 NPPBP16860 134 aa18.11■□□□□ 0.49
UBXN4-202ENST00000415164 MAOAP21397 527 aa18.11■□□□□ 0.49
UBXN4-202ENST00000415164 MEOX1P50221 254 aa18.11■□□□□ 0.49
UBXN4-202ENST00000415164 BTG2P78543 158 aa18.11■□□□□ 0.49
UBXN4-202ENST00000415164 DHX9Q08211 1270 aaKnown RBP18.11■□□□□ 0.49
UBXN4-202ENST00000415164 CEP128Q6ZU80 1094 aa18.11■□□□□ 0.49
UBXN4-202ENST00000415164 CD163Q86VB7 1156 aa18.11■□□□□ 0.49
UBXN4-202ENST00000415164 GAS2L3Q86XJ1 694 aa18.11■□□□□ 0.49
UBXN4-202ENST00000415164 LGI4Q8N135 537 aa18.11■□□□□ 0.49
UBXN4-202ENST00000415164 MCUQ8NE86 351 aa18.11■□□□□ 0.49
UBXN4-202ENST00000415164 ELP5Q8TE02 316 aa18.11■□□□□ 0.49
UBXN4-202ENST00000415164 SNF8Q96H20 258 aa18.11■□□□□ 0.49
UBXN4-202ENST00000415164 TSNARE1Q96NA8 513 aa18.11■□□□□ 0.49
UBXN4-202ENST00000415164 VKORC1Q9BQB6 163 aa18.11■□□□□ 0.49
UBXN4-202ENST00000415164 SGPP1Q9BX95 441 aa18.11■□□□□ 0.49
UBXN4-202ENST00000415164 DEFB126Q9BYW3 111 aa18.11■□□□□ 0.49
UBXN4-202ENST00000415164 PCNX1Q96RV3 2341 aa18.1■□□□□ 0.49
UBXN4-202ENST00000415164 CDKN2DP55273 166 aa18.1■□□□□ 0.49
UBXN4-202ENST00000415164 RAB8AP61006 207 aa18.1■□□□□ 0.49
UBXN4-202ENST00000415164 CSHL1Q14406 222 aa18.1■□□□□ 0.49
UBXN4-202ENST00000415164 CATSPEREQ5SY80 951 aa18.1■□□□□ 0.49
UBXN4-202ENST00000415164 RBM20Q5T481 1227 aaKnown RBP18.1■□□□□ 0.49
UBXN4-202ENST00000415164 ABHD13Q7L211 337 aa18.1■□□□□ 0.49
UBXN4-202ENST00000415164 AGGF1Q8N302 714 aaeCLIP18.1■□□□□ 0.49
UBXN4-202ENST00000415164 TRIM58Q8NG06 486 aa18.1■□□□□ 0.49
UBXN4-202ENST00000415164 FBXW2Q9UKT8 454 aa18.1■□□□□ 0.49
UBXN4-202ENST00000415164 ASB1Q9Y576 335 aa18.1■□□□□ 0.49
UBXN4-202ENST00000415164 TACC2O95359 2948 aa18.09■□□□□ 0.49
UBXN4-202ENST00000415164 A0A1B0GTH9 108 aa18.09■□□□□ 0.49
UBXN4-202ENST00000415164 SAGE2PA6NJ88 616 aa18.09■□□□□ 0.49
UBXN4-202ENST00000415164 FAM90A27PA6NNH2 459 aa18.09■□□□□ 0.49
UBXN4-202ENST00000415164 SLC16A5O15375 505 aa18.09■□□□□ 0.49
UBXN4-202ENST00000415164 HS6ST1O60243 411 aa18.09■□□□□ 0.49
UBXN4-202ENST00000415164 CCDC175P0C221 793 aa18.09■□□□□ 0.49
UBXN4-202ENST00000415164 PTGS2P35354 604 aa18.09■□□□□ 0.49
UBXN4-202ENST00000415164 MLF1P58340 268 aa18.09■□□□□ 0.49
UBXN4-202ENST00000415164 PDAP1Q13442 181 aaKnown RBP18.09■□□□□ 0.49
UBXN4-202ENST00000415164 PWP1Q13610 501 aa18.09■□□□□ 0.49
UBXN4-202ENST00000415164 RBBP5Q15291 538 aaKnown RBP18.09■□□□□ 0.49
UBXN4-202ENST00000415164 DUPD1Q68J44 220 aa18.09■□□□□ 0.49
UBXN4-202ENST00000415164 FGD2Q7Z6J4 655 aa18.09■□□□□ 0.49
UBXN4-202ENST00000415164 AFAP1L2Q8N4X5 818 aa18.09■□□□□ 0.49
UBXN4-202ENST00000415164 PHF10Q8WUB8 498 aaKnown RBP18.09■□□□□ 0.49
UBXN4-202ENST00000415164 MS4A14Q96JA4 679 aa18.09■□□□□ 0.49
UBXN4-202ENST00000415164 OLFM1Q99784 485 aa18.09■□□□□ 0.49
UBXN4-202ENST00000415164 SPOCK3Q9BQ16 436 aa18.09■□□□□ 0.49
UBXN4-202ENST00000415164 TRIM54Q9BYV2 358 aa18.09■□□□□ 0.49
UBXN4-202ENST00000415164 SPNS1Q9H2V7 528 aa18.09■□□□□ 0.49
UBXN4-202ENST00000415164 NEU2Q9Y3R4 380 aa18.09■□□□□ 0.49
UBXN4-202ENST00000415164 TRBV11-1A0A0K0K1C0 115 aa18.08■□□□□ 0.48
UBXN4-202ENST00000415164 TRBC2A0A5B9 178 aa18.08■□□□□ 0.48
UBXN4-202ENST00000415164 PDE9AO76083 593 aa18.08■□□□□ 0.48
UBXN4-202ENST00000415164 CAPN3P20807 821 aa18.08■□□□□ 0.48
UBXN4-202ENST00000415164 HLCSP50747 726 aa18.08■□□□□ 0.48
UBXN4-202ENST00000415164 PGGT1BP53609 377 aa18.08■□□□□ 0.48
UBXN4-202ENST00000415164 GPR85P60893 370 aa18.08■□□□□ 0.48
UBXN4-202ENST00000415164 TIAL1Q01085 375 aaKnown RBP eCLIP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms