RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 UBAP1Q9NZ09 502 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 TNPO3Q9Y5L0 923 aaKnown RBP9.55□□□□□ -0.88
DDB1-202ENST00000414411 KNTC1P50748 2209 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 FAM221BA6H8Z2 402 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 AQP12BA6NM10 295 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 ZNF839A8K0R7 811 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 RHPN2P1A8MT19 583 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 EEDO75530 441 aaKnown RBP9.54□□□□□ -0.88
DDB1-202ENST00000414411 SLC22A3O75751 556 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 SMIM18P0DKX4 95 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 GRIA3P42263 894 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 GDF5P43026 501 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 CLCN2P51788 898 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 UFM1P61960 85 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 SQSTM1Q13501 440 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 NAE1Q13564 534 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 ATP6AP1LQ52LC2 224 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 MTX3Q5HYI7 312 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 C6orf136Q5SQH8 315 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 C6orf52Q5T4I8 152 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 LCN8Q6JVE9 175 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 GUSBP11Q6P575 273 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 GOLGA7Q7Z5G4 137 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 PIP4P1Q86T03 277 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 EGFL6Q8IUX8 553 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 AQP12AQ8IXF9 295 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 SYTL1Q8IYJ3 562 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 SMPDL3AQ92484 453 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 VPS33AQ96AX1 596 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 CDK15Q96Q40 435 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 UCN2Q96RP3 112 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 SLC38A3Q99624 504 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 CENPKQ9BS16 269 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 C1orf50Q9BV19 199 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 TRIM15Q9C019 465 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 SEMA6AQ9H2E6 1030 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 NOL11Q9H8H0 719 aaKnown RBP9.54□□□□□ -0.88
DDB1-202ENST00000414411 ARMC1Q9NVT9 282 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 TMEM45AQ9NWC5 275 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 SPHK1Q9NYA1 384 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 ZIM2Q9NZV7 527 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 PCDHA9Q9Y5H5 950 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 SNX13Q9Y5W8 968 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 IGHV1OR21-1A0A087WYE8 117 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 CPED1A4D0V7 1026 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 OR6C74A6NCV1 312 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 PABPN1LA6NDY0 278 aaKnown RBP9.54□□□□□ -0.88
DDB1-202ENST00000414411 OR7A17O14581 309 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 SNPHO15079 494 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 STK16O75716 305 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 UBXN7O94888 489 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 LDOC1O95751 146 aaPredicted RBP9.54□□□□□ -0.88
DDB1-202ENST00000414411 FESP07332 822 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 CAPN1P07384 714 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 CHRM5P08912 532 aaPredicted RBP9.54□□□□□ -0.88
DDB1-202ENST00000414411 NPPBP16860 134 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 CKMT2P17540 419 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 ACP1P24666 158 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 PEBP1P30086 187 aaKnown RBP9.54□□□□□ -0.88
DDB1-202ENST00000414411 HSPA7P48741 367 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 HTR6P50406 440 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 DUSP3P51452 185 aaPredicted RBP9.54□□□□□ -0.88
DDB1-202ENST00000414411 POLR2JP52435 117 aaKnown RBP9.54□□□□□ -0.88
DDB1-202ENST00000414411 OR1D5P58170 312 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 YBX1P67809 324 aaKnown RBP9.54□□□□□ -0.88
DDB1-202ENST00000414411 GTF2H2Q13888 395 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 NFYCQ13952 458 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 PLCL1Q15111 1095 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 PERM1Q5SV97 790 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 HMBOX1Q6NT76 420 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 GTF2H2CQ6P1K8 395 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 SUSD1Q6UWL2 747 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 Q6ZSR9 355 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 C2orf73Q8N5S3 287 aaPredicted RBP9.54□□□□□ -0.88
DDB1-202ENST00000414411 FNDC5Q8NAU1 212 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 GOLM1Q8NBJ4 401 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 OR2A1Q8NGT9 310 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 FLVCR1-AS1Q8TAF5 88 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 CANT1Q8WVQ1 401 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 NAT6Q93015 286 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 CCDC74AQ96AQ1 378 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 TMEM125Q96AQ2 219 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 PYCR2Q96C36 320 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 CNDP2Q96KP4 475 aaKnown RBP9.54□□□□□ -0.88
DDB1-202ENST00000414411 ZNF597Q96LX8 424 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 CNBD2Q96M20 576 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 OR4K3Q96R72 315 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 SLC32A1Q9H598 525 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 ACTR3BQ9P1U1 418 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 LEF1Q9UJU2 399 aaPredicted RBP9.54□□□□□ -0.88
DDB1-202ENST00000414411 PCDHGB4Q9UN71 923 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 PCDHGB5Q9Y5G0 923 aa9.54□□□□□ -0.88
DDB1-202ENST00000414411 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.53□□□□□ -0.88
DDB1-202ENST00000414411 FAM234BA2RU67 622 aa9.53□□□□□ -0.88
DDB1-202ENST00000414411 OR5K3A6NET4 321 aa9.53□□□□□ -0.88
DDB1-202ENST00000414411 CCDC154A6NI56 674 aa9.53□□□□□ -0.88
DDB1-202ENST00000414411 TM4SF5O14894 197 aa9.53□□□□□ -0.88
DDB1-202ENST00000414411 CASC3O15234 703 aaKnown RBP9.53□□□□□ -0.88
DDB1-202ENST00000414411 TIPRLO75663 272 aa9.53□□□□□ -0.88
DDB1-202ENST00000414411 OTCP00480 354 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms