RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 NAGSQ8N159 534 aa16.96■□□□□ 0.31
SDCBP-202ENST00000413219 ASCC1Q8N9N2 400 aaKnown RBP16.96■□□□□ 0.31
SDCBP-202ENST00000413219 OR6K2Q8NGY2 324 aa16.96■□□□□ 0.31
SDCBP-202ENST00000413219 MAL2Q969L2 176 aa16.96■□□□□ 0.31
SDCBP-202ENST00000413219 OR5M11Q96RB7 305 aa16.96■□□□□ 0.31
SDCBP-202ENST00000413219 NMRK2Q9NPI5 230 aa16.96■□□□□ 0.31
SDCBP-202ENST00000413219 TRPM5Q9NZQ8 1165 aa16.96■□□□□ 0.31
SDCBP-202ENST00000413219 ARRDC5A6NEK1 342 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 K7ERQ8 282 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 ARHGAP33O14559 1287 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 SSX4O60224 188 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 ITPKAP23677 461 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 CHMP24386 653 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 HNF4AP41235 474 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 TUFMP49411 452 aaKnown RBP16.95■□□□□ 0.3
SDCBP-202ENST00000413219 HMGA2P52926 109 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 PFN3P60673 137 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 CYP4F2P78329 520 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 GAB1Q13480 694 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 MED22Q15528 200 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 ZFP69Q49AA0 526 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 PLAG1Q6DJT9 500 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 ZNF517Q6ZMY9 492 aaPredicted RBP16.95■□□□□ 0.3
SDCBP-202ENST00000413219 RAB43Q86YS6 212 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 RNF175Q8N4F7 328 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 CDC26Q8NHZ8 85 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 WDFY2Q96P53 400 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 P2RY13Q9BPV8 354 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 BRF2Q9HAW0 419 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 C14orf119Q9NWQ9 140 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 CLN6Q9NWW5 311 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 TMEM161AQ9NX61 479 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 ERVK13-1Q9NX77 482 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 TAS2R9Q9NYW1 312 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 PCNTO95613 3336 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 RNASET2O00584 256 aaKnown RBP16.95■□□□□ 0.3
SDCBP-202ENST00000413219 PCDH7O60245 1069 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 ENDOUP21128 410 aaKnown RBP16.95■□□□□ 0.3
SDCBP-202ENST00000413219 RPS5P46782 204 aaKnown RBP16.95■□□□□ 0.3
SDCBP-202ENST00000413219 LIMS1P48059 325 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 RHAGQ02094 409 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 HSPA14Q0VDF9 509 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 DMC1Q14565 340 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 MBTPS1Q14703 1052 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 KCNA10Q16322 511 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 NRARPQ7Z6K4 114 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 OR8H2Q8N162 312 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 SIMC1Q8NDZ2 872 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 SKA2Q8WVK7 121 aaPredicted RBP16.95■□□□□ 0.3
SDCBP-202ENST00000413219 CXorf40BQ96DE9 158 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 ST6GAL2Q96JF0 529 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 KCNS3Q9BQ31 491 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 C2orf49Q9BVC5 232 aaPredicted RBP16.95■□□□□ 0.3
SDCBP-202ENST00000413219 HCN4Q9Y3Q4 1203 aa16.95■□□□□ 0.3
SDCBP-202ENST00000413219 PIKFYVEQ9Y2I7 2098 aa16.94■□□□□ 0.3
SDCBP-202ENST00000413219 SLC35F4A4IF30 521 aa16.94■□□□□ 0.3
SDCBP-202ENST00000413219 ZAR1LA6NP61 321 aa16.94■□□□□ 0.3
SDCBP-202ENST00000413219 CENPXA8MT69 81 aa16.94■□□□□ 0.3
SDCBP-202ENST00000413219 TNFRSF21O75509 655 aa16.94■□□□□ 0.3
SDCBP-202ENST00000413219 GPX5O75715 221 aa16.94■□□□□ 0.3
SDCBP-202ENST00000413219 CCNB2O95067 398 aa16.94■□□□□ 0.3
SDCBP-202ENST00000413219 CD22P20273 847 aa16.94■□□□□ 0.3
SDCBP-202ENST00000413219 IDSP22304 550 aa16.94■□□□□ 0.3
SDCBP-202ENST00000413219 CXCR2P25025 360 aa16.94■□□□□ 0.3
SDCBP-202ENST00000413219 ZXDBP98169 803 aa16.94■□□□□ 0.3
SDCBP-202ENST00000413219 CDK10Q15131 360 aa16.94■□□□□ 0.3
SDCBP-202ENST00000413219 SSX1Q16384 188 aa16.94■□□□□ 0.3
SDCBP-202ENST00000413219 MFSD14CQ5VZR4 134 aa16.94■□□□□ 0.3
SDCBP-202ENST00000413219 VASH1Q7L8A9 365 aaPredicted RBP16.94■□□□□ 0.3
SDCBP-202ENST00000413219 VN1R5Q7Z5H4 357 aa16.94■□□□□ 0.3
SDCBP-202ENST00000413219 RASGRP3Q8IV61 690 aa16.94■□□□□ 0.3
SDCBP-202ENST00000413219 GOT1L1Q8NHS2 421 aaPredicted RBP16.94■□□□□ 0.3
SDCBP-202ENST00000413219 TSEN34Q9BSV6 310 aaKnown RBP16.94■□□□□ 0.3
SDCBP-202ENST00000413219 RNF38Q9H0F5 515 aa16.94■□□□□ 0.3
SDCBP-202ENST00000413219 DDX28Q9NUL7 540 aaKnown RBP16.94■□□□□ 0.3
SDCBP-202ENST00000413219 SNX8Q9Y5X2 465 aa16.94■□□□□ 0.3
SDCBP-202ENST00000413219 UTRNP46939 3433 aa16.94■□□□□ 0.3
SDCBP-202ENST00000413219 HMX3A6NHT5 357 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 UPK3BL1B0FP48 263 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 UPK3BL2E5RIL1 263 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 H0YIV9 168 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 SEPT4O43236 478 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 SMAD6O43541 496 aaKnown RBP16.93■□□□□ 0.3
SDCBP-202ENST00000413219 SEMA3DO95025 777 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 MFN2O95140 757 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 SCG5P05408 212 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 HMGA1P17096 107 aaKnown RBP16.93■□□□□ 0.3
SDCBP-202ENST00000413219 CBLP22681 906 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 SLC11A1P49279 550 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 PRIM2P49643 509 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 MVDP53602 400 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 RAE1P78406 368 aaKnown RBP16.93■□□□□ 0.3
SDCBP-202ENST00000413219 FCHO2Q0JRZ9 810 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 PTGES3Q15185 160 aaKnown RBP16.93■□□□□ 0.3
SDCBP-202ENST00000413219 NXNL2Q5VZ03 156 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 LRRC66Q68CR7 880 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 CRTC1Q6UUV9 634 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 TPRG1Q6ZUI0 275 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 TSPAN33Q86UF1 283 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 C2orf69Q8N8R5 385 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms