RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 CRHR1P34998 444 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 ARL1P40616 181 aaPredicted RBP7.31□□□□□ -1.24
CPSF4-202ENST00000412686 CASP2P42575 452 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 RGS1Q08116 209 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 CHAF1BQ13112 559 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 TRAF3Q13114 568 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 PWP1Q13610 501 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 DDX39BQ13838 428 aaKnown RBP7.31□□□□□ -1.24
CPSF4-202ENST00000412686 FAM53BQ14153 422 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 TBCCQ15814 346 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 CPSF6Q16630 551 aaKnown RBP eCLIP7.31□□□□□ -1.24
CPSF4-202ENST00000412686 TBR1Q16650 682 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 NDUFA9Q16795 377 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 LINC00303Q3SY05 128 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 DEFB134Q4QY38 66 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 TCHHL1Q5QJ38 904 aaPredicted RBP7.31□□□□□ -1.24
CPSF4-202ENST00000412686 ZNF678Q5SXM1 525 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 NUP210LQ5VU65 1888 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 GARNL3Q5VVW2 1013 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 GRHL2Q6ISB3 625 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 MED27Q6P2C8 311 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 PRMT9Q6P2P2 845 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 ZYG11AQ6WRX3 759 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 LCA5Q86VQ0 697 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 ZC3H7AQ8IWR0 971 aaKnown RBP7.31□□□□□ -1.24
CPSF4-202ENST00000412686 LAS2Q8IYD9 372 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 KRT78Q8N1N4 520 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 RIBC1Q8N443 379 aaPredicted RBP7.31□□□□□ -1.24
CPSF4-202ENST00000412686 AFAP1L2Q8N4X5 818 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 TBC1D19Q8N5T2 526 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 BANPQ8N9N5 519 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 CCDC63Q8NA47 563 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 OR4F6Q8NGB9 312 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 OR2Y1Q8NGV0 311 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 STT3BQ8TCJ2 826 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 TRPC4APQ8TEL6 797 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 ZNF483Q8TF39 744 aaPredicted RBP7.31□□□□□ -1.24
CPSF4-202ENST00000412686 ZNF473Q8WTR7 871 aaKnown RBP7.31□□□□□ -1.24
CPSF4-202ENST00000412686 TTC9Q92623 222 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 APOPT1Q96IL0 206 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 BBC3Q96PG8 261 aaPredicted RBP7.31□□□□□ -1.24
CPSF4-202ENST00000412686 EFHD1Q9BUP0 239 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 EFCAB11Q9BUY7 163 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 TMEM109Q9BVC6 243 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 SORBS1Q9BX66 1292 aaKnown RBP7.31□□□□□ -1.24
CPSF4-202ENST00000412686 ROPN1BQ9BZX4 212 aaPredicted RBP7.31□□□□□ -1.24
CPSF4-202ENST00000412686 CENPHQ9H3R5 247 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 NT5DC2Q9H857 520 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 ROPN1Q9HAT0 212 aaPredicted RBP7.31□□□□□ -1.24
CPSF4-202ENST00000412686 ANKHQ9HCJ1 492 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 TRPC4Q9UBN4 977 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 ZNF225Q9UK10 706 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 PADI2Q9Y2J8 665 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 NAALAD2Q9Y3Q0 740 aa7.31□□□□□ -1.24
CPSF4-202ENST00000412686 TNPO3Q9Y5L0 923 aaKnown RBP7.31□□□□□ -1.24
CPSF4-202ENST00000412686 PTPRQQ9UMZ3 2332 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 SCN2AQ99250 2005 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 DMXL2Q8TDJ6 3036 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 IGLV3-12A0A075B6K2 115 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 LRIT2A6NDA9 550 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 ANKDD1BA6NHY2 528 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 ARGFXA6NJG6 315 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 H0YIG0 161 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 SAP18O00422 153 aaKnown RBP7.3□□□□□ -1.24
CPSF4-202ENST00000412686 CTIFO43310 598 aaKnown RBP7.3□□□□□ -1.24
CPSF4-202ENST00000412686 ERI3O43414 337 aaKnown RBP7.3□□□□□ -1.24
CPSF4-202ENST00000412686 GALR3O60755 368 aaPredicted RBP7.3□□□□□ -1.24
CPSF4-202ENST00000412686 CLEC3AO75596 197 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 CDC123O75794 336 aaPredicted RBP7.3□□□□□ -1.24
CPSF4-202ENST00000412686 OR4F21O95013 312 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 NSA2O95478 260 aaKnown RBP7.3□□□□□ -1.24
CPSF4-202ENST00000412686 ETHE1O95571 254 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 SERPINA6P08185 405 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 ZGLP1P0C6A0 271 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 SMIM10L1P0DMW3 83 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 MYL2P10916 166 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 TAC1P20366 129 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 FOLR3P41439 243 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 AVPR1BP47901 424 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 CCT5P48643 541 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 NEK2P51955 445 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 CCNG1P51959 295 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 PLA2G16P53816 162 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 PRKAA2P54646 552 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 RPS13P62277 151 aaKnown RBP7.3□□□□□ -1.24
CPSF4-202ENST00000412686 HERVK_113P63132 956 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 CLCQ05315 142 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 KLC1Q07866 573 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 PCDH1Q08174 1060 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 ATP1A4Q13733 1029 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 PCLAFQ15004 111 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 ZRSR2Q15696 482 aaKnown RBP7.3□□□□□ -1.24
CPSF4-202ENST00000412686 RBBP7Q16576 425 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 UGT8Q16880 541 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 PAGE2BQ5JRK9 111 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 FAAH2Q6GMR7 532 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 LETMD1Q6P1Q0 360 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 PPP1R32Q7Z5V6 425 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 UBE3DQ7Z6J8 389 aa7.3□□□□□ -1.24
CPSF4-202ENST00000412686 EXOC3L1Q86VI1 746 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms