RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 ZNF672Q499Z4 452 aaPredicted RBP2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ZNF585BQ52M93 769 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SYT14P1Q58G82 188 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SLC35D3Q5M8T2 416 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 DCLRE1AQ6PJP8 1040 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 C9orf139Q6ZV77 190 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ARHGAP22Q7Z5H3 698 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SLC9B2Q86UD5 537 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 HOOK3Q86VS8 718 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ZNF595Q8IYB9 648 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CLYBLQ8N0X4 340 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 LSMEM2Q8N112 164 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MARVELD2Q8N4S9 558 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CCDC63Q8NA47 563 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 THAP8Q8NA92 274 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MSANTD4Q8NCY6 345 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 OR4K1Q8NGD4 311 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 OR5M8Q8NGP6 311 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 PHLDA1Q8WV24 401 aaPredicted RBP2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 KCNE4Q8WWG9 221 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SORCS1Q8WY21 1168 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 IRGQQ8WZA9 623 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TMEM143Q96AN5 459 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 OTUB1Q96FW1 271 aaPredicted RBP2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 EEF2KMTQ96G04 330 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CFAP36Q96G28 342 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 C17orf77Q96MU5 243 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 RHNO1Q9BSD3 238 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TRIM7Q9C029 511 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SDCBP2Q9H190 292 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 BICC1Q9H694 974 aaKnown RBP2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ZNF334Q9HCZ1 680 aaPredicted RBP2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 IL1RAPL2Q9NP60 686 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 FAM207AQ9NSI2 230 aaPredicted RBP2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 EXOC1Q9NV70 894 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ADPRHL2Q9NX46 363 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 PKD2L2Q9NZM6 624 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 B3GAT1Q9P2W7 334 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 LIPT1Q9Y234 373 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 NUP98P52948 1817 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 GAKO14976 1311 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 RAD50Q92878 1312 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 REV3LO60673 3130 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CACNA1SQ13698 1873 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 EVPLQ92817 2033 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 C2orf92A0A1B0GVN3 265 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CTAGE9A4FU28 777 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TMEM221A6NGB7 291 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 DUXAA6NLW8 204 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TMEM150CB9EJG8 249 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 PRAC2D3DTV9 90 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 PTGESO14684 152 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ZNF263O14978 683 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 DUSP11O75319 330 aaKnown RBP2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CIAO1O76071 339 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SLCO2B1O94956 709 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 WDPCPO95876 746 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 IGKV5-2P06315 115 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CSN3P07498 182 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 OR52Z1P0C646 297 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ZNF853P0CG23 659 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CTAGE8P0CG41 777 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ADRA2CP18825 462 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MUTP22033 750 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SFTPDP35247 375 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 PTGER4P35408 488 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 IER3P46695 156 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 RGS7P49802 495 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 HMGCS2P54868 508 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 IL10RBQ08334 325 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 GPR17Q13304 367 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ZRSR1Q15695 479 aaKnown RBP2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TYSND1Q2T9J0 566 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ANKRD20A4Q4UJ75 823 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ANKRD20A8PQ5CZ79 823 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ANKRD20A2Q5SQ80 823 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CYP4A22Q5TCH4 519 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ANKRD20A1Q5TYW2 823 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ANKRD20A3Q5VUR7 823 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SLC35E4Q6ICL7 350 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 OR4A47Q6IF82 309 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CAVIN1Q6NZI2 390 aaKnown RBP2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CDC42EP5Q6NZY7 148 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 FUT10Q6P4F1 479 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SHQ1Q6PI26 577 aaKnown RBP2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CORO6Q6QEF8 472 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 PRSS55Q6UWB4 352 aaPredicted RBP2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 NUP54Q7Z3B4 507 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 NRARPQ7Z6K4 114 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SIAH3Q8IW03 269 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CTAGE4Q8IX94 777 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TUSC5Q8IXB3 177 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 LGI2Q8N0V4 545 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ARHGAP24Q8N264 748 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 PRSS35Q8N3Z0 413 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 DNAJC22Q8N4W6 341 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 NEXN-AS1Q8NBZ9 246 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 NPEPL1Q8NDH3 523 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 OR52N5Q8NH56 324 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms