RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 SLC2A2P11168 524 aaPredicted RBP3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 CYP3A5P20815 502 aa3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 CDKN1AP38936 164 aa3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 NR0B1P51843 470 aaKnown RBP3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 KCNJ10P78508 379 aa3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 RPL36AP83881 106 aaKnown RBP3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 GAMTQ14353 236 aa3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 GRB14Q14449 540 aa3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 ZNF74Q16587 644 aa3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 C9orf50Q5SZB4 431 aa3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 OR4C11Q6IEV9 310 aa3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 ZNF790Q6PG37 636 aa3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 SLC25A47Q6Q0C1 308 aa3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 CEACAM20Q6UY09 585 aa3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 SLC26A9Q7LBE3 791 aa3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 BATF2Q8N1L9 274 aa3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 THEM5Q8N1Q8 247 aa3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 SMYD1Q8NB12 490 aa3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 GATAD1Q8WUU5 269 aa3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 SUSD6Q92537 303 aa3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 SEPT8Q92599 483 aa3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 HAS2Q92819 552 aa3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 TMEM186Q96B77 213 aa3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 LURAP1Q96LR2 239 aa3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 ZNF560Q96MR9 790 aa3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 RUNDC3BQ96NL0 473 aa3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 GUCD1Q96NT3 240 aa3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 FSD1Q9BTV5 496 aa3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 DPEP2Q9H4A9 486 aa3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 SYTL2Q9HCH5 934 aa3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 KCNMB3Q9NPA1 279 aa3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 ZCCHC3Q9NUD5 404 aaKnown RBP3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 C2orf42Q9NWW7 574 aa3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 CCPG1Q9ULG6 757 aa3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 SATB2Q9UPW6 733 aa3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 PIN4Q9Y237 131 aaKnown RBP3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 NCKAP1Q9Y2A7 1128 aa3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 PPP2R2CQ9Y2T4 447 aa3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 STRAPQ9Y3F4 350 aaKnown RBP3.6□□□□□ -1.83
RNU2-28P-201ENST00000410457 MSGN1A6NI15 193 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 NKX6-3A6NJ46 265 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 A8MVM7 634 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 BLOC1S5-TXNDC5H3BN57 136 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 TLR4O00206 839 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 MAGEB2O15479 319 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 PCDH7O60245 1069 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 CYTIPO60759 359 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 HSF2BPO75031 334 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 SAP30O75446 220 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 KHDRBS3O75525 346 aaKnown RBP3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 AP2A2O94973 939 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 MT-ND2P03891 347 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 FAM157CP0CG43 387 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 ANPEPP15144 967 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 UGT1A6P19224 532 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 ATXN3P54252 364 aaPredicted RBP3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 HUNKP57058 714 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 DCDC1P59894 354 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 PHEXP78562 749 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 HNRNPA0Q13151 305 aaKnown RBP3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 GPR50Q13585 617 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 TRA2AQ13595 282 aaKnown RBP eCLIP3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 ITGA9Q13797 1035 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 PDK1Q15118 436 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 PTPN14Q15678 1187 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 GTDC1Q4AE62 458 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 ARHGEF16Q5VV41 709 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 ZNF776Q68DI1 518 aaPredicted RBP3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 SLC27A4Q6P1M0 643 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 PSRC1Q6PGN9 363 aaPredicted RBP3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 SH2D5Q6ZV89 423 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 C1orf186Q6ZWK4 172 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 CYP4V2Q6ZWL3 525 aaPredicted RBP3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 ERC1Q8IUD2 1116 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 LSMEM2Q8N112 164 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 FBXW8Q8N3Y1 598 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 CCDC185Q8N715 623 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 TRIM58Q8NG06 486 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 OR10V1Q8NGI7 309 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 OR10G8Q8NGN5 311 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 ZNF524Q96C55 264 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 NXPE2Q96DL1 559 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 UHRF2Q96PU4 802 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 NKX3-1Q99801 234 aaPredicted RBP3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 PIGQQ9BRB3 760 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 CCM2Q9BSQ5 444 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 TDRD1Q9BXT4 1180 aaKnown RBP3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 CARD9Q9H257 536 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 HSD3B7Q9H2F3 369 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 ATP13A3Q9H7F0 1226 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 VIPAS39Q9H9C1 493 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 TMOD3Q9NYL9 352 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 NINJ2Q9NZG7 142 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 ERVK-19Q9WJR5 959 aa3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 MTF2Q9Y483 593 aaPredicted RBP3.59□□□□□ -1.83
RNU2-28P-201ENST00000410457 WDR81Q562E7 1941 aa3.58□□□□□ -1.84
RNU2-28P-201ENST00000410457 TRBV4-1A0A0J9YWV2 114 aa3.58□□□□□ -1.84
RNU2-28P-201ENST00000410457 CCDC162PA2VCL2 907 aa3.58□□□□□ -1.84
RNU2-28P-201ENST00000410457 ZNF732B4DXR9 585 aa3.58□□□□□ -1.84
RNU2-28P-201ENST00000410457 SLCO1B7G3V0H7 640 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms