RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 PSMG1O95456 288 aa13.42□□□□□ -0.26
GPNMB-203ENST00000409458 ANXA6P08133 673 aa13.42□□□□□ -0.26
GPNMB-203ENST00000409458 LAMP1P11279 417 aa13.42□□□□□ -0.26
GPNMB-203ENST00000409458 PVRP15151 417 aa13.42□□□□□ -0.26
GPNMB-203ENST00000409458 TYRP1P17643 537 aa13.42□□□□□ -0.26
GPNMB-203ENST00000409458 CDKN2CP42773 168 aa13.42□□□□□ -0.26
GPNMB-203ENST00000409458 ATXN3P54252 364 aaPredicted RBP13.42□□□□□ -0.26
GPNMB-203ENST00000409458 TAS2R50P59544 299 aa13.42□□□□□ -0.26
GPNMB-203ENST00000409458 TJAP1Q5JTD0 557 aa13.42□□□□□ -0.26
GPNMB-203ENST00000409458 MSANTD1Q6ZTZ1 278 aa13.42□□□□□ -0.26
GPNMB-203ENST00000409458 ZNF438Q7Z4V0 828 aa13.42□□□□□ -0.26
GPNMB-203ENST00000409458 CAMKMTQ7Z624 323 aa13.42□□□□□ -0.26
GPNMB-203ENST00000409458 C17orf82Q86X59 251 aaPredicted RBP13.42□□□□□ -0.26
GPNMB-203ENST00000409458 MSRB3Q8IXL7 192 aa13.42□□□□□ -0.26
GPNMB-203ENST00000409458 TMEM132CQ8N3T6 1108 aa13.42□□□□□ -0.26
GPNMB-203ENST00000409458 OR8J2Q8NGG1 315 aa13.42□□□□□ -0.26
GPNMB-203ENST00000409458 STARD8Q92502 1023 aa13.42□□□□□ -0.26
GPNMB-203ENST00000409458 STMN2Q93045 179 aa13.42□□□□□ -0.26
GPNMB-203ENST00000409458 RGMAQ96B86 450 aa13.42□□□□□ -0.26
GPNMB-203ENST00000409458 ASB9Q96DX5 294 aa13.42□□□□□ -0.26
GPNMB-203ENST00000409458 INPP5KQ9BT40 448 aa13.42□□□□□ -0.26
GPNMB-203ENST00000409458 PAIP1Q9H074 479 aaKnown RBP13.42□□□□□ -0.26
GPNMB-203ENST00000409458 PCDHAC1Q9H158 963 aa13.42□□□□□ -0.26
GPNMB-203ENST00000409458 KLHL31Q9H511 634 aa13.42□□□□□ -0.26
GPNMB-203ENST00000409458 RNPEPL1Q9HAU8 725 aa13.42□□□□□ -0.26
GPNMB-203ENST00000409458 SLC6A13Q9NSD5 602 aa13.42□□□□□ -0.26
GPNMB-203ENST00000409458 SLC25A37Q9NYZ2 338 aa13.42□□□□□ -0.26
GPNMB-203ENST00000409458 CROCCQ5TZA2 2017 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 TRBV5-3A0A0A0MS03 114 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 C15orf38-AP3S2A0A0A6YYH1 394 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 A0A0G2JN53 185 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 A0A0J9YY10 115 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 GABRR3A8MPY1 467 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 ACOT8O14734 319 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 HRO43593 1189 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 CTSVO60911 334 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 SCN2BO60939 215 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 IL3P08700 152 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 HOXB9P17482 250 aaPredicted RBP13.41□□□□□ -0.26
GPNMB-203ENST00000409458 PLA2G16P53816 162 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 MTPNP58546 118 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 RPS15AP62244 130 aaKnown RBP13.41□□□□□ -0.26
GPNMB-203ENST00000409458 MC1RQ01726 317 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 SRSF11Q05519 484 aaKnown RBP13.41□□□□□ -0.26
GPNMB-203ENST00000409458 FLOT2Q14254 428 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 ADPRMQ3LIE5 342 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 PLK5Q496M5 336 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 ZNF385BQ569K4 471 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 TOR1AIP1Q5JTV8 583 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 CCNYL2Q5T2Q4 361 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 FAM71E1Q6IPT2 247 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 FIGLAQ6QHK4 219 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 ZNF793Q6ZN11 406 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 PRR23BQ6ZRT6 265 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 VN1R4Q7Z5H5 301 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 ARPINQ7Z6K5 226 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 C11orf74Q86VG3 221 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 NUDT13Q86X67 352 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 MMP21Q8N119 569 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 SDR16C5Q8N3Y7 309 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 AMER3Q8N944 861 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 AVL9Q8NBF6 648 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 TRPV3Q8NET8 790 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 JADE3Q92613 823 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 ITCHQ96J02 903 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 TEFMQ96QE5 360 aaKnown RBP13.41□□□□□ -0.26
GPNMB-203ENST00000409458 CENPKQ9BS16 269 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 KCNH6Q9H252 994 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 REEP4Q9H6H4 257 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 RMND5AQ9H871 391 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 ERVMER34-1Q9H9K5 563 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 ANKMY1Q9P2S6 941 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.41□□□□□ -0.26
GPNMB-203ENST00000409458 ATP6V1HQ9UI12 483 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 L3MBTL1Q9Y468 752 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 PCDHGA2Q9Y5H1 932 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 KLK4Q9Y5K2 254 aa13.41□□□□□ -0.26
GPNMB-203ENST00000409458 A0A096LPI6 279 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 CAPN5O15484 640 aaPredicted RBP13.4□□□□□ -0.26
GPNMB-203ENST00000409458 TMPRSS11DO60235 418 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 PRAMEF10O60809 474 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 BCAS2O75934 225 aaPredicted RBP13.4□□□□□ -0.26
GPNMB-203ENST00000409458 FURINP09958 794 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 EFNA1P20827 205 aaPredicted RBP13.4□□□□□ -0.26
GPNMB-203ENST00000409458 BNIP3Q12983 259 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 PDE7AQ13946 482 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 TRIM25Q14258 630 aaKnown RBP13.4□□□□□ -0.26
GPNMB-203ENST00000409458 RCN1Q15293 331 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 SHBQ15464 509 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 MUM1Q2TAK8 710 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 TMEM35AQ53FP2 167 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 LRIF1Q5T3J3 769 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 CPTPQ5TA50 214 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 FBXO42Q6P3S6 717 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 OGFOD3Q6PK18 319 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 IKBIPQ70UQ0 350 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 PAGE2Q7Z2X7 111 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 CLECL1Q8IZS7 167 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 ENDOVQ8N8Q3 282 aaKnown RBP13.4□□□□□ -0.26
GPNMB-203ENST00000409458 BHLHE22Q8NFJ8 381 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms