RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 CD244Q9BZW8 370 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 OR51V1Q9H2C8 321 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 NMUR1Q9HB89 426 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 EQTNQ9NQ60 294 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 PAK1IP1Q9NWT1 392 aaPredicted RBP5.91□□□□□ -1.46
SCN1A-203ENST00000409050 ZNF69Q9UC07 566 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 IL36AQ9UHA7 158 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 UPK3BL1B0FP48 263 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 UPK3BL2E5RIL1 263 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 TSPAN4O14817 238 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 TPD52L2O43399 206 aaKnown RBP5.91□□□□□ -1.46
SCN1A-203ENST00000409050 HTRA2O43464 458 aaPredicted RBP5.91□□□□□ -1.46
SCN1A-203ENST00000409050 UGDHO60701 494 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 SH3BGRLO75368 114 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 AQP1P29972 269 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 TM4SF1P30408 202 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 PSMD8P48556 350 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 AFF1P51825 1210 aaKnown RBP5.91□□□□□ -1.46
SCN1A-203ENST00000409050 CRISP1P54107 249 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 MLLT6P55198 1093 aaPredicted RBP5.91□□□□□ -1.46
SCN1A-203ENST00000409050 HSD11B2P80365 405 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 CAMK2DQ13557 499 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 PPM1JQ5JR12 505 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 NCBP2-AS2Q69YL0 99 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 CHADLQ6NUI6 762 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 PNCKQ6P2M8 343 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 YIPF7Q8N8F6 280 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 WDSUB1Q8N9V3 476 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 GLIS3Q8NEA6 775 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 LRCH3Q96II8 777 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 CMKLR1Q99788 373 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 C17orf62Q9BQA9 187 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 MVB12BQ9H7P6 319 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 MEAF6Q9HAF1 191 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 HPF1Q9NWY4 346 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 PADI3Q9ULW8 664 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 NOP16Q9Y3C1 178 aaKnown RBP5.91□□□□□ -1.46
SCN1A-203ENST00000409050 AGAP5A6NIR3 686 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 NT5C1B-RDH14C9J2C7 533 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 B4GALT5O43286 388 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 RAD51DO75771 328 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 RNASEH2AO75792 299 aaKnown RBP5.91□□□□□ -1.46
SCN1A-203ENST00000409050 IFNA10P01566 189 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 CHRNA1P02708 482 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 LRRC32Q14392 662 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 FAM214AQ32MH5 1076 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 MYLK3Q32MK0 819 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 SLC27A4Q6P1M0 643 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 PSRC1Q6PGN9 363 aaPredicted RBP5.91□□□□□ -1.46
SCN1A-203ENST00000409050 HAGHLQ6PII5 290 aaPredicted RBP5.91□□□□□ -1.46
SCN1A-203ENST00000409050 SAPCD2Q86UD0 394 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 GALNT6Q8NCL4 622 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 OR5B12Q96R08 314 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 SYT3Q9BQG1 590 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 IRF2BPLQ9H1B7 796 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 OR10A4Q9H209 315 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 KIDINS220Q9ULH0 1771 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 LMO7Q8WWI1 1683 aa5.91□□□□□ -1.46
SCN1A-203ENST00000409050 RAB19A4D1S5 217 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 I3L521 148 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 CLDN5O00501 218 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 TOR1BO14657 336 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 TP53I11O14683 189 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 CA12O43570 354 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 TLL1O43897 1013 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 EPHX1P07099 455 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 LEPRP48357 1165 aaKnown RBP5.9□□□□□ -1.46
SCN1A-203ENST00000409050 ALDH3B2P48448 385 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 DEFA5Q01523 94 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 MELKQ14680 651 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 TSTQ16762 297 aaKnown RBP5.9□□□□□ -1.46
SCN1A-203ENST00000409050 UGT3A2Q3SY77 523 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 SH3D19Q5HYK7 790 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 FAM69AQ5T7M9 428 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 CEP68Q76N32 757 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 ZNF627Q7L945 461 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 GKN2Q86XP6 184 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 NRROSQ86YC3 692 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 OR51D1Q8NGF3 324 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 FNDC8Q8TC99 324 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 NINJ1Q92982 152 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 PIP5K1AQ99755 562 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 DOHHQ9BU89 302 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 ATG10Q9H0Y0 220 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 MTG2Q9H4K7 406 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 TLE6Q9H808 572 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 INPP5EQ9NRR6 644 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 FBXW2Q9UKT8 454 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 MRC1P22897 1456 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 TEX13DA0A0J9YY54 714 aaPredicted RBP5.9□□□□□ -1.46
SCN1A-203ENST00000409050 NEMP2A6NFY4 417 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 ZNF878C9JN71 531 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 DLX3O60479 287 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 RFPL1O75677 317 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 AZGP1P25311 298 aaKnown RBP5.9□□□□□ -1.46
SCN1A-203ENST00000409050 UQCRC1P31930 480 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 NUDT1P36639 197 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 BRCC3P46736 316 aa5.9□□□□□ -1.46
SCN1A-203ENST00000409050 DUSP3P51452 185 aaPredicted RBP5.9□□□□□ -1.46
SCN1A-203ENST00000409050 PPP5CP53041 499 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms