RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 DEKP35659 375 aaKnown RBP4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 HTR6P50406 440 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 SLC12A3P55017 1021 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 GFPT1Q06210 699 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 SLC3A1Q07837 685 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 TAF10Q12962 218 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 LCP2Q13094 533 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 PPA1Q15181 289 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 TAF7Q15545 349 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 AGAP6Q5VW22 663 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 AWAT2Q6E213 333 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 NADSYN1Q6IA69 706 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 G2E3Q7L622 706 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 ANKRD33Q7Z3H0 272 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 RTN4RL2Q86UN3 420 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 NFE4Q86UQ8 179 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 CROCCP3Q8IVE0 287 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 ZNF444Q8N0Y2 327 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 SLC13A3Q8WWT9 602 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 SORCS1Q8WY21 1168 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 TBC1D31Q96DN5 1066 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 LYZL4Q96KX0 146 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 RUNDC3BQ96NL0 473 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 FAM213AQ9BRX8 229 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 RHNO1Q9BSD3 238 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 TSPYL1Q9H0U9 437 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 CPVLQ9H3G5 476 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 RIMS4Q9H426 269 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 DDX31Q9H8H2 851 aaKnown RBP4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 RPF1Q9H9Y2 349 aaKnown RBP4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 EXOC1Q9NV70 894 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 HPF1Q9NWY4 346 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 FAF1Q9UNN5 650 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 AGTPBP1Q9UPW5 1226 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 HBS1LQ9Y450 684 aaKnown RBP4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 MTF2Q9Y483 593 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 KLK4Q9Y5K2 254 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 RTL1A6NKG5 1358 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 HEG1Q9ULI3 1381 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 NRKQ7Z2Y5 1582 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 A0A087X0K7 114 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 A0A0A6YYC8 382 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 C2orf92A0A1B0GVN3 265 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 C19orf81C9J6K1 198 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 I3L1I5 382 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 ATP6V0E1O15342 81 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 PRPSAP2O60256 369 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 GRAP2O75791 330 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 KRT33AO76009 404 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 GAS8O95995 478 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 ABHD2P08910 425 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 CCDC192P0DO97 292 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 DGKAP23743 735 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 ALDH4A1P30038 563 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 LUMP51884 338 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 ADARP55265 1226 aaKnown RBP4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 MYL7Q01449 175 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 IL1RL1Q01638 556 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 HFEQ30201 348 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 ARMCX4Q5H9R4 360 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 C9orf57Q5W0N0 161 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 CATSPER4Q7RTX7 472 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 C16orf82Q7Z2V1 217 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 PRUNE1Q86TP1 453 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 ISCA2Q86U28 154 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 TMEM126BQ8IUX1 230 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 EID3Q8N140 333 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 BATF2Q8N1L9 274 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 SFRP1Q8N474 314 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 MAB21L3Q8N8X9 362 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 MRPL43Q8N983 215 aaKnown RBP4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 DMBX1Q8NFW5 382 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 METTL21AQ8WXB1 218 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 THOC3Q96J01 351 aaKnown RBP4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 ST6GAL2Q96JF0 529 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 BTBD9Q96Q07 612 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 ZPBPQ9BS86 351 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 C1QTNF4Q9BXJ3 329 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 TEX13AQ9BXU3 409 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 TFB2MQ9H5Q4 396 aaKnown RBP4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 LRRC4Q9HBW1 653 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 PPANQ9NQ55 473 aaKnown RBP4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 P4HTMQ9NXG6 502 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 RNF7Q9UBF6 113 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 TRIM10Q9UDY6 481 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 IL36AQ9UHA7 158 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 TRMT6Q9UJA5 497 aaKnown RBP4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 TSPAN16Q9UKR8 245 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 GRID1Q9ULK0 1009 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 FOXA2Q9Y261 457 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 EXOC6BQ9Y2D4 811 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 NPHP3Q7Z494 1330 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 RGS12O14924 1447 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 NPHP4O75161 1426 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 ADGRL3Q9HAR2 1447 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 CEP170BQ9Y4F5 1589 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 TOPAZ1Q8N9V7 1692 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 XRN1Q8IZH2 1706 aaKnown RBP4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 AKAP12Q02952 1782 aa4.34□□□□□ -1.71
HMGB3P18-201ENST00000406327 PEAK1Q9H792 1746 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms