RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 C10orf62Q5T681 223 aaPredicted RBP10.06□□□□□ -0.8
RPAIN-204ENST00000405578 MED27Q6P2C8 311 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 FBXO42Q6P3S6 717 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 MILR1Q7Z6M3 343 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 ASPGQ86U10 573 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 C10orf107Q8IVU9 208 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 CSNK1A1LQ8N752 337 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 ANKRD42Q8N9B4 389 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 MFSD9Q8NBP5 474 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 OR1L3Q8NH93 324 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 TRPC4APQ8TEL6 797 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 ZNF483Q8TF39 744 aaPredicted RBP10.06□□□□□ -0.8
RPAIN-204ENST00000405578 SLC13A3Q8WWT9 602 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 PMEPA1Q969W9 287 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 ARL8AQ96BM9 186 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 WDR34Q96EX3 536 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 ABHD17AQ96GS6 310 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 OR2A5Q96R48 311 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 CENPKQ9BS16 269 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 NTMT1Q9BV86 223 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 SARGQ9BW04 601 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 C12orf65Q9H3J6 166 aaKnown RBP10.06□□□□□ -0.8
RPAIN-204ENST00000405578 ACTR5Q9H9F9 607 aaPredicted RBP10.06□□□□□ -0.8
RPAIN-204ENST00000405578 EML4Q9HC35 981 aaKnown RBP10.06□□□□□ -0.8
RPAIN-204ENST00000405578 MED4Q9NPJ6 270 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 SEMA4BQ9NPR2 832 aaPredicted RBP10.06□□□□□ -0.8
RPAIN-204ENST00000405578 ADGRE2Q9UHX3 823 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 ZFP69BQ9UJL9 534 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 PILRAQ9UKJ1 303 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 SH2B3Q9UQQ2 575 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 ASB1Q9Y576 335 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 PCDHB3Q9Y5E6 796 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 PCDHGA11Q9Y5H2 935 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 B3GALT1Q9Y5Z6 326 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 SPENQ96T58 3664 aaKnown RBP10.06□□□□□ -0.8
RPAIN-204ENST00000405578 POLQO75417 2590 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 ITPR3Q14573 2671 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 LRRC14BA6NHZ5 514 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 NKX2-8O15522 239 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 NDUFS4O43181 175 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 CPNE3O75131 537 aaKnown RBP10.05□□□□□ -0.8
RPAIN-204ENST00000405578 WFS1O76024 890 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 KLK3P07288 261 aaPredicted RBP10.05□□□□□ -0.8
RPAIN-204ENST00000405578 CCNYL3P0C7X3 344 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 NR1D1P20393 614 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 GNLYP22749 145 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 COL8A1P27658 744 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 ALDH3A1P30838 453 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 BCL6P41182 706 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 SCTRP47872 440 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 EMP3P54852 163 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 CDH13P55290 713 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 PKNOX1P55347 436 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 MEF2AQ02078 507 aaPredicted RBP10.05□□□□□ -0.8
RPAIN-204ENST00000405578 TGM3Q08188 693 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 IFT88Q13099 833 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 PWP1Q13610 501 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 PCLAFQ15004 111 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 MUM1Q2TAK8 710 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 UNC50Q53HI1 259 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 GARNL3Q5VVW2 1013 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 TTC19Q6DKK2 380 aaPredicted RBP10.05□□□□□ -0.8
RPAIN-204ENST00000405578 GRHL2Q6ISB3 625 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 PWWP2BQ6NUJ5 590 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 NIPAL1Q6NVV3 410 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 GPRIN3Q6ZVF9 776 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 PLD3Q8IV08 490 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 TRIM42Q8IWZ5 723 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 L3MBTL4Q8NA19 623 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 CLIP3Q96DZ5 547 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 CNDP1Q96KN2 507 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 PHF12Q96QT6 1004 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 ZNF382Q96SR6 550 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 SPRTNQ9H040 489 aaPredicted RBP10.05□□□□□ -0.8
RPAIN-204ENST00000405578 ELOVL6Q9H5J4 265 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 APMAPQ9HDC9 416 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 ZNF446Q9NWS9 450 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 CDC14AQ9UNH5 594 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 TP53TG5Q9Y2B4 290 aa10.05□□□□□ -0.8
RPAIN-204ENST00000405578 A0A088AWK7 358 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 LOC105369274A0A096LPK9 316 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 LOC102723532A0A0G2JNH3 316 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 HYKKA2RU49 373 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 FITM1A5D6W6 292 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 H0YIV9 168 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 OR7A17O14581 309 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 ZNF749O43361 778 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 NPHS1O60500 1241 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 CLEC3AO75596 197 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 STK17BO94768 372 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 KIAA0754O94854 1291 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 SNUPNO95149 360 aaKnown RBP10.04□□□□□ -0.8
RPAIN-204ENST00000405578 KRT6AP02538 564 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 KRT6BP04259 564 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 SERPINA6P08185 405 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 PIM1P11309 404 aaPredicted RBP10.04□□□□□ -0.8
RPAIN-204ENST00000405578 PCNAP12004 261 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 EPORP19235 508 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 ZNF10P21506 573 aaPredicted RBP10.04□□□□□ -0.8
RPAIN-204ENST00000405578 AGXTP21549 392 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms