RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 TLX3O43711 291 aaPredicted RBP27.88■■■□□ 2.05
USP42-202ENST00000404008 C1QTNF9P0C862 333 aa27.88■■■□□ 2.05
USP42-202ENST00000404008 CHN1P15882 459 aa27.88■■■□□ 2.05
USP42-202ENST00000404008 ITGAXP20702 1163 aa27.88■■■□□ 2.05
USP42-202ENST00000404008 HMOX2P30519 316 aa27.88■■■□□ 2.05
USP42-202ENST00000404008 ATP1A2P50993 1020 aa27.88■■■□□ 2.05
USP42-202ENST00000404008 ABHD18Q0P651 414 aa27.88■■■□□ 2.05
USP42-202ENST00000404008 ZNF517Q6ZMY9 492 aaPredicted RBP27.88■■■□□ 2.05
USP42-202ENST00000404008 AFAP1L2Q8N4X5 818 aa27.88■■■□□ 2.05
USP42-202ENST00000404008 SNIP1Q8TAD8 396 aaKnown RBP27.88■■■□□ 2.05
USP42-202ENST00000404008 UTP15Q8TED0 518 aaKnown RBP27.88■■■□□ 2.05
USP42-202ENST00000404008 MS4A6EQ96DS6 147 aa27.88■■■□□ 2.05
USP42-202ENST00000404008 CMTM7Q96FZ5 175 aa27.88■■■□□ 2.05
USP42-202ENST00000404008 DPH2Q9BQC3 489 aaPredicted RBP27.88■■■□□ 2.05
USP42-202ENST00000404008 REXO4Q9GZR2 422 aaKnown RBP27.88■■■□□ 2.05
USP42-202ENST00000404008 AKIRIN1Q9H9L7 192 aaPredicted RBP27.88■■■□□ 2.05
USP42-202ENST00000404008 FARSBQ9NSD9 589 aaKnown RBP27.88■■■□□ 2.05
USP42-202ENST00000404008 PSD3Q9NYI0 1048 aa27.88■■■□□ 2.05
USP42-202ENST00000404008 PPT2Q9UMR5 302 aa27.88■■■□□ 2.05
USP42-202ENST00000404008 TIMM22Q9Y584 194 aa27.88■■■□□ 2.05
USP42-202ENST00000404008 DMXL2Q8TDJ6 3036 aa27.88■■■□□ 2.05
USP42-202ENST00000404008 CHD8Q9HCK8 2581 aa27.88■■■□□ 2.05
USP42-202ENST00000404008 CELSR3Q9NYQ7 3312 aa27.88■■■□□ 2.05
USP42-202ENST00000404008 MANBAO00462 879 aa27.87■■■□□ 2.05
USP42-202ENST00000404008 FOXS1O43638 330 aa27.87■■■□□ 2.05
USP42-202ENST00000404008 TGFB1P01137 390 aa27.87■■■□□ 2.05
USP42-202ENST00000404008 PDYNP01213 254 aa27.87■■■□□ 2.05
USP42-202ENST00000404008 KRT6AP02538 564 aa27.87■■■□□ 2.05
USP42-202ENST00000404008 KRT6BP04259 564 aa27.87■■■□□ 2.05
USP42-202ENST00000404008 KLK3P07288 261 aaPredicted RBP27.87■■■□□ 2.05
USP42-202ENST00000404008 CCNYL3P0C7X3 344 aa27.87■■■□□ 2.05
USP42-202ENST00000404008 ZNF888P0CJ79 500 aaPredicted RBP27.87■■■□□ 2.05
USP42-202ENST00000404008 SMIM10L1P0DMW3 83 aa27.87■■■□□ 2.05
USP42-202ENST00000404008 KRT6CP48668 564 aa27.87■■■□□ 2.05
USP42-202ENST00000404008 ABCE1P61221 599 aaKnown RBP27.87■■■□□ 2.05
USP42-202ENST00000404008 RPS13P62277 151 aaKnown RBP27.87■■■□□ 2.05
USP42-202ENST00000404008 FOXK2Q01167 660 aa27.87■■■□□ 2.05
USP42-202ENST00000404008 STX3Q13277 289 aa27.87■■■□□ 2.05
USP42-202ENST00000404008 PRMT9Q6P2P2 845 aa27.87■■■□□ 2.05
USP42-202ENST00000404008 ABHD13Q7L211 337 aa27.87■■■□□ 2.05
USP42-202ENST00000404008 PRSS41Q7RTY9 318 aa27.87■■■□□ 2.05
USP42-202ENST00000404008 METTL27Q8N6F8 245 aaPredicted RBP27.87■■■□□ 2.05
USP42-202ENST00000404008 RAB3IL1Q8TBN0 382 aa27.87■■■□□ 2.05
USP42-202ENST00000404008 NKD1Q969G9 470 aa27.87■■■□□ 2.05
USP42-202ENST00000404008 SMIM10Q96HG1 83 aa27.87■■■□□ 2.05
USP42-202ENST00000404008 PRM3Q9NNZ6 103 aa27.87■■■□□ 2.05
USP42-202ENST00000404008 LHX9Q9NQ69 397 aa27.87■■■□□ 2.05
USP42-202ENST00000404008 PADI1Q9ULC6 663 aa27.87■■■□□ 2.05
USP42-202ENST00000404008 SCN3AQ9NY46 2000 aa27.87■■■□□ 2.05
USP42-202ENST00000404008 C4orf51C9J302 202 aa27.86■■■□□ 2.05
USP42-202ENST00000404008 ITM2AO43736 263 aa27.86■■■□□ 2.05
USP42-202ENST00000404008 CRCPO75575 148 aa27.86■■■□□ 2.05
USP42-202ENST00000404008 LYPLA1O75608 230 aaPredicted RBP27.86■■■□□ 2.05
USP42-202ENST00000404008 UROSP10746 265 aa27.86■■■□□ 2.05
USP42-202ENST00000404008 BST1Q10588 318 aa27.86■■■□□ 2.05
USP42-202ENST00000404008 HERC3Q15034 1050 aa27.86■■■□□ 2.05
USP42-202ENST00000404008 SGO1Q5FBB7 561 aa27.86■■■□□ 2.05
USP42-202ENST00000404008 OR2L5Q8NG80 312 aa27.86■■■□□ 2.05
USP42-202ENST00000404008 SELENOMQ8WWX9 145 aa27.86■■■□□ 2.05
USP42-202ENST00000404008 GAL3ST3Q96A11 431 aa27.86■■■□□ 2.05
USP42-202ENST00000404008 F2RL3Q96RI0 385 aa27.86■■■□□ 2.05
USP42-202ENST00000404008 ZNF395Q9H8N7 513 aaPredicted RBP27.86■■■□□ 2.05
USP42-202ENST00000404008 A0A0A6YYC8 382 aaPredicted RBP27.86■■■□□ 2.05
USP42-202ENST00000404008 I3L1I5 382 aaPredicted RBP27.86■■■□□ 2.05
USP42-202ENST00000404008 AZIN1O14977 448 aa27.86■■■□□ 2.05
USP42-202ENST00000404008 HSPA4LO95757 839 aa27.86■■■□□ 2.05
USP42-202ENST00000404008 ALOX12P18054 663 aa27.86■■■□□ 2.05
USP42-202ENST00000404008 IL1RNP18510 177 aa27.86■■■□□ 2.05
USP42-202ENST00000404008 AGXTP21549 392 aa27.86■■■□□ 2.05
USP42-202ENST00000404008 PTX3P26022 381 aaPredicted RBP27.86■■■□□ 2.05
USP42-202ENST00000404008 STAT5AP42229 794 aa27.86■■■□□ 2.05
USP42-202ENST00000404008 SLC1A6P48664 564 aa27.86■■■□□ 2.05
USP42-202ENST00000404008 DCDP81605 110 aaKnown RBP27.86■■■□□ 2.05
USP42-202ENST00000404008 NKAIN1Q4KMZ8 207 aa27.86■■■□□ 2.05
USP42-202ENST00000404008 TMEM35AQ53FP2 167 aa27.86■■■□□ 2.05
USP42-202ENST00000404008 KHDRBS2Q5VWX1 349 aaKnown RBP27.86■■■□□ 2.05
USP42-202ENST00000404008 CLEC6AQ6EIG7 209 aa27.86■■■□□ 2.05
USP42-202ENST00000404008 LCN10Q6JVE6 187 aa27.86■■■□□ 2.05
USP42-202ENST00000404008 CHSY3Q70JA7 882 aa27.86■■■□□ 2.05
USP42-202ENST00000404008 PDSS2Q86YH6 399 aa27.86■■■□□ 2.05
USP42-202ENST00000404008 TRIM42Q8IWZ5 723 aa27.86■■■□□ 2.05
USP42-202ENST00000404008 CACNA2D3Q8IZS8 1091 aa27.86■■■□□ 2.05
USP42-202ENST00000404008 OR9A4Q8NGU2 314 aa27.86■■■□□ 2.05
USP42-202ENST00000404008 MR1Q95460 341 aa27.86■■■□□ 2.05
USP42-202ENST00000404008 C20orf27Q9GZN8 174 aa27.86■■■□□ 2.05
USP42-202ENST00000404008 OR51B5Q9H339 312 aa27.86■■■□□ 2.05
USP42-202ENST00000404008 ANKHQ9HCJ1 492 aa27.86■■■□□ 2.05
USP42-202ENST00000404008 INTS9Q9NV88 658 aaKnown RBP27.86■■■□□ 2.05
USP42-202ENST00000404008 CDC14AQ9UNH5 594 aa27.86■■■□□ 2.05
USP42-202ENST00000404008 AHCTF1Q8WYP5 2266 aa27.85■■■□□ 2.05
USP42-202ENST00000404008 ERI3O43414 337 aaKnown RBP27.85■■■□□ 2.05
USP42-202ENST00000404008 ULK1O75385 1050 aa27.85■■■□□ 2.05
USP42-202ENST00000404008 SNUPNO95149 360 aaKnown RBP27.85■■■□□ 2.05
USP42-202ENST00000404008 NSA2O95478 260 aaKnown RBP27.85■■■□□ 2.05
USP42-202ENST00000404008 ONECUT2O95948 504 aa27.85■■■□□ 2.05
USP42-202ENST00000404008 FGF4P08620 206 aa27.85■■■□□ 2.05
USP42-202ENST00000404008 OR1D4P47884 311 aa27.85■■■□□ 2.05
USP42-202ENST00000404008 HTR6P50406 440 aa27.85■■■□□ 2.05
USP42-202ENST00000404008 RAB8AP61006 207 aa27.85■■■□□ 2.05
USP42-202ENST00000404008 TGIF1Q15583 401 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms