RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 C2orf54Q08AI8 447 aa14.47□□□□□ -0.09
TPM1-207ENST00000403994 SFT2D3Q587I9 215 aa14.47□□□□□ -0.09
TPM1-207ENST00000403994 ABHD17BQ5VST6 288 aa14.47□□□□□ -0.09
TPM1-207ENST00000403994 ZNF324BQ6AW86 544 aaPredicted RBP14.47□□□□□ -0.09
TPM1-207ENST00000403994 PAPD4Q6PIY7 484 aaKnown RBP14.47□□□□□ -0.09
TPM1-207ENST00000403994 NXPE4Q6UWF7 544 aa14.47□□□□□ -0.09
TPM1-207ENST00000403994 ABHD13Q7L211 337 aa14.47□□□□□ -0.09
TPM1-207ENST00000403994 SPATA4Q8NEY3 305 aa14.47□□□□□ -0.09
TPM1-207ENST00000403994 PYROXD1Q8WU10 500 aa14.47□□□□□ -0.09
TPM1-207ENST00000403994 AIF1LQ9BQI0 150 aa14.47□□□□□ -0.09
TPM1-207ENST00000403994 UNKQ9C0B0 810 aaKnown RBP14.47□□□□□ -0.09
TPM1-207ENST00000403994 SLC6A16Q9GZN6 736 aa14.47□□□□□ -0.09
TPM1-207ENST00000403994 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.47□□□□□ -0.09
TPM1-207ENST00000403994 CTNNAL1Q9UBT7 734 aa14.47□□□□□ -0.09
TPM1-207ENST00000403994 TEKT2Q9UIF3 430 aa14.47□□□□□ -0.09
TPM1-207ENST00000403994 SLC22A14Q9Y267 594 aa14.47□□□□□ -0.09
TPM1-207ENST00000403994 MYO9AB2RTY4 2548 aa14.47□□□□□ -0.09
TPM1-207ENST00000403994 TCRBV9S1A1TA0A576 114 aa14.46□□□□□ -0.09
TPM1-207ENST00000403994 OR5H15A6NDH6 313 aa14.46□□□□□ -0.09
TPM1-207ENST00000403994 MAGEB17A8MXT2 336 aa14.46□□□□□ -0.09
TPM1-207ENST00000403994 CXorf49A8MYA2 514 aaPredicted RBP14.46□□□□□ -0.09
TPM1-207ENST00000403994 EIF3HO15372 352 aaKnown RBP eCLIP14.46□□□□□ -0.09
TPM1-207ENST00000403994 DNAJB6O75190 326 aa14.46□□□□□ -0.09
TPM1-207ENST00000403994 WDR47O94967 919 aa14.46□□□□□ -0.09
TPM1-207ENST00000403994 CLDN1O95832 211 aa14.46□□□□□ -0.09
TPM1-207ENST00000403994 SSTR1P30872 391 aa14.46□□□□□ -0.09
TPM1-207ENST00000403994 HNMTP50135 292 aa14.46□□□□□ -0.09
TPM1-207ENST00000403994 TDGF1P3P51864 188 aa14.46□□□□□ -0.09
TPM1-207ENST00000403994 POU4F1Q01851 419 aa14.46□□□□□ -0.09
TPM1-207ENST00000403994 HYAL2Q12891 473 aa14.46□□□□□ -0.09
TPM1-207ENST00000403994 ILF2Q12905 390 aaKnown RBP14.46□□□□□ -0.09
TPM1-207ENST00000403994 USP10Q14694 798 aaKnown RBP14.46□□□□□ -0.09
TPM1-207ENST00000403994 NSDHLQ15738 373 aa14.46□□□□□ -0.09
TPM1-207ENST00000403994 EXT1Q16394 746 aa14.46□□□□□ -0.09
TPM1-207ENST00000403994 C18orf21Q32NC0 220 aaPredicted RBP14.46□□□□□ -0.09
TPM1-207ENST00000403994 NIPAL1Q6NVV3 410 aa14.46□□□□□ -0.09
TPM1-207ENST00000403994 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.46□□□□□ -0.09
TPM1-207ENST00000403994 KLHDC8AQ8IYD2 350 aa14.46□□□□□ -0.09
TPM1-207ENST00000403994 UTP15Q8TED0 518 aaKnown RBP14.46□□□□□ -0.09
TPM1-207ENST00000403994 TBC1D20Q96BZ9 403 aa14.46□□□□□ -0.09
TPM1-207ENST00000403994 RHBDF1Q96CC6 855 aa14.46□□□□□ -0.09
TPM1-207ENST00000403994 GPR22Q99680 433 aa14.46□□□□□ -0.09
TPM1-207ENST00000403994 DERL2Q9GZP9 239 aa14.46□□□□□ -0.09
TPM1-207ENST00000403994 AICDAQ9GZX7 198 aa14.46□□□□□ -0.09
TPM1-207ENST00000403994 CAB39LQ9H9S4 337 aa14.46□□□□□ -0.09
TPM1-207ENST00000403994 MTO1Q9Y2Z2 717 aaKnown RBP14.46□□□□□ -0.09
TPM1-207ENST00000403994 KCNE2Q9Y6J6 123 aa14.46□□□□□ -0.09
TPM1-207ENST00000403994 NCF1BA6NI72 391 aaPredicted RBP14.45□□□□□ -0.1
TPM1-207ENST00000403994 FAM159BA6NKW6 160 aa14.45□□□□□ -0.1
TPM1-207ENST00000403994 NCF1CA8MVU1 366 aaPredicted RBP14.45□□□□□ -0.1
TPM1-207ENST00000403994 PHGDHO43175 533 aaKnown RBP14.45□□□□□ -0.1
TPM1-207ENST00000403994 CHST10O43529 356 aa14.45□□□□□ -0.1
TPM1-207ENST00000403994 C1QAP02745 245 aa14.45□□□□□ -0.1
TPM1-207ENST00000403994 NCF1P14598 390 aaPredicted RBP14.45□□□□□ -0.1
TPM1-207ENST00000403994 JAK1P23458 1154 aa14.45□□□□□ -0.1
TPM1-207ENST00000403994 SLC12A2P55011 1212 aa14.45□□□□□ -0.1
TPM1-207ENST00000403994 TGFBIQ15582 683 aa14.45□□□□□ -0.1
TPM1-207ENST00000403994 C4orf17Q53FE4 359 aa14.45□□□□□ -0.1
TPM1-207ENST00000403994 ACER2Q5QJU3 275 aa14.45□□□□□ -0.1
TPM1-207ENST00000403994 FCRLBQ6BAA4 426 aa14.45□□□□□ -0.1
TPM1-207ENST00000403994 H3F3CQ6NXT2 135 aa14.45□□□□□ -0.1
TPM1-207ENST00000403994 BEST3Q8N1M1 668 aa14.45□□□□□ -0.1
TPM1-207ENST00000403994 C17orf53Q8N3J3 647 aaPredicted RBP14.45□□□□□ -0.1
TPM1-207ENST00000403994 SPATA6LQ8N4H0 392 aa14.45□□□□□ -0.1
TPM1-207ENST00000403994 PLPP5Q8NEB5 264 aa14.45□□□□□ -0.1
TPM1-207ENST00000403994 TRPV3Q8NET8 790 aa14.45□□□□□ -0.1
TPM1-207ENST00000403994 NR4A3Q92570 626 aa14.45□□□□□ -0.1
TPM1-207ENST00000403994 CDKL2Q92772 493 aa14.45□□□□□ -0.1
TPM1-207ENST00000403994 RBBP8Q99708 897 aa14.45□□□□□ -0.1
TPM1-207ENST00000403994 NPAS2Q99743 824 aa14.45□□□□□ -0.1
TPM1-207ENST00000403994 CPNE1Q99829 537 aa14.45□□□□□ -0.1
TPM1-207ENST00000403994 TMEM79Q9BSE2 394 aa14.45□□□□□ -0.1
TPM1-207ENST00000403994 MMP25Q9NPA2 562 aa14.45□□□□□ -0.1
TPM1-207ENST00000403994 OSGIN2Q9Y236 505 aa14.45□□□□□ -0.1
TPM1-207ENST00000403994 ABCA12Q86UK0 2595 aa14.44□□□□□ -0.1
TPM1-207ENST00000403994 A8MUI8 341 aa14.44□□□□□ -0.1
TPM1-207ENST00000403994 PRAMEF2O60811 474 aa14.44□□□□□ -0.1
TPM1-207ENST00000403994 SERPINA6P08185 405 aa14.44□□□□□ -0.1
TPM1-207ENST00000403994 GNAZP19086 355 aa14.44□□□□□ -0.1
TPM1-207ENST00000403994 HNF4AP41235 474 aa14.44□□□□□ -0.1
TPM1-207ENST00000403994 GDF5P43026 501 aa14.44□□□□□ -0.1
TPM1-207ENST00000403994 OR4D2P58180 307 aa14.44□□□□□ -0.1
TPM1-207ENST00000403994 SLC26A5P58743 744 aa14.44□□□□□ -0.1
TPM1-207ENST00000403994 RAB8AP61006 207 aa14.44□□□□□ -0.1
TPM1-207ENST00000403994 SLBPQ14493 270 aaKnown RBP eCLIP14.44□□□□□ -0.1
TPM1-207ENST00000403994 RBBP5Q15291 538 aaKnown RBP14.44□□□□□ -0.1
TPM1-207ENST00000403994 TOR1AIP1Q5JTV8 583 aa14.44□□□□□ -0.1
TPM1-207ENST00000403994 SLCO4C1Q6ZQN7 724 aa14.44□□□□□ -0.1
TPM1-207ENST00000403994 QSOX2Q6ZRP7 698 aa14.44□□□□□ -0.1
TPM1-207ENST00000403994 MAMDC2Q7Z304 686 aaPredicted RBP14.44□□□□□ -0.1
TPM1-207ENST00000403994 MAATS1Q7Z4T9 603 aa14.44□□□□□ -0.1
TPM1-207ENST00000403994 CRLF3Q8IUI8 442 aa14.44□□□□□ -0.1
TPM1-207ENST00000403994 M1APQ8TC57 530 aa14.44□□□□□ -0.1
TPM1-207ENST00000403994 CREB3L4Q8TEY5 395 aa14.44□□□□□ -0.1
TPM1-207ENST00000403994 TSPAN17Q96FV3 270 aa14.44□□□□□ -0.1
TPM1-207ENST00000403994 LPAR4Q99677 370 aa14.44□□□□□ -0.1
TPM1-207ENST00000403994 PHACTR1Q9C0D0 580 aa14.44□□□□□ -0.1
TPM1-207ENST00000403994 KLHL31Q9H511 634 aa14.44□□□□□ -0.1
TPM1-207ENST00000403994 KCNK13Q9HB14 408 aa14.44□□□□□ -0.1
TPM1-207ENST00000403994 STMN3Q9NZ72 180 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms