RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 DNAJC22Q8N4W6 341 aa13.48□□□□□ -0.25
HMGA2-204ENST00000403681 GDPD1Q8N9F7 314 aa13.48□□□□□ -0.25
HMGA2-204ENST00000403681 OR4K1Q8NGD4 311 aa13.48□□□□□ -0.25
HMGA2-204ENST00000403681 AKAP1Q92667 903 aaKnown RBP eCLIP13.48□□□□□ -0.25
HMGA2-204ENST00000403681 YIPF6Q96EC8 236 aa13.48□□□□□ -0.25
HMGA2-204ENST00000403681 CCSER2Q9H7U1 834 aa13.48□□□□□ -0.25
HMGA2-204ENST00000403681 CTPS2Q9NRF8 586 aa13.48□□□□□ -0.25
HMGA2-204ENST00000403681 STUB1Q9UNE7 303 aa13.48□□□□□ -0.25
HMGA2-204ENST00000403681 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.48□□□□□ -0.25
HMGA2-204ENST00000403681 PCDHGA12O60330 932 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 ATXN1LP0C7T5 689 aaKnown RBP13.47□□□□□ -0.25
HMGA2-204ENST00000403681 CNR2P34972 360 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 LGALS3BPQ08380 585 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 STX4Q12846 297 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 ELAVL2Q12926 359 aaKnown RBP13.47□□□□□ -0.25
HMGA2-204ENST00000403681 RAB41Q5JT25 222 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 PJA1Q8NG27 643 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 SPATA5L1Q9BVQ7 753 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 TSSK6Q9BXA6 273 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 PSORS1C1Q9UIG5 152 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 BAIAP2Q9UQB8 552 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 ALDH1A1P00352 501 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 PTHP01270 115 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 ADORA3P0DMS8 318 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 SNRPD1P62314 119 aaKnown RBP13.47□□□□□ -0.25
HMGA2-204ENST00000403681 PLD1Q13393 1074 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 CRB2Q5IJ48 1285 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 TPGS1Q6ZTW0 290 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 CXXC5Q7LFL8 322 aaKnown RBP13.47□□□□□ -0.25
HMGA2-204ENST00000403681 ZNF438Q7Z4V0 828 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 RAB42Q8N4Z0 105 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 OXR1Q8N573 874 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 FUBP3Q96I24 572 aaKnown RBP eCLIP13.47□□□□□ -0.258e-10■■□□□ 12.9
HMGA2-204ENST00000403681 ZFP3Q96NJ6 502 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 RHNO1Q9BSD3 238 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 CLMPQ9H6B4 373 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 RWDD3Q9Y3V2 267 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 DNMT3AQ9Y6K1 912 aaPredicted RBP13.47□□□□□ -0.25
HMGA2-204ENST00000403681 GJB3O75712 270 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 SOX3P41225 446 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 AP1S1P61966 158 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 KIAA0319Q5VV43 1072 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 TMEM179BQ7Z7N9 219 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 GALNT13Q8IUC8 556 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 FAM109AQ8N4B1 249 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 SLIRPQ9GZT3 109 aaKnown RBP13.47□□□□□ -0.25
HMGA2-204ENST00000403681 RNF167Q9H6Y7 350 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 SLC25A13Q9UJS0 675 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 PCDHGB2Q9Y5G2 931 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 PDPK1O15530 556 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 SSTR4P31391 388 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 STAT5AP42229 794 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 ATP12AP54707 1039 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 ADAM15Q13444 863 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 GPR33Q49SQ1 333 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 MED27Q6P2C8 311 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 RNF130Q86XS8 419 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 YAF2Q8IY57 180 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 OR9Q2Q8NGE9 314 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 CPPED1Q9BRF8 314 aaPredicted RBP13.47□□□□□ -0.25
HMGA2-204ENST00000403681 PPIL3Q9H2H8 161 aaKnown RBP13.47□□□□□ -0.25
HMGA2-204ENST00000403681 TTYH1Q9H313 450 aaPredicted RBP13.47□□□□□ -0.25
HMGA2-204ENST00000403681 DLGAP4Q9Y2H0 992 aa13.47□□□□□ -0.25
HMGA2-204ENST00000403681 A0A1W2PRB8 838 aa13.46□□□□□ -0.25
HMGA2-204ENST00000403681 APOL3O95236 402 aa13.46□□□□□ -0.25
HMGA2-204ENST00000403681 H1F0P07305 194 aaKnown RBP13.46□□□□□ -0.25
HMGA2-204ENST00000403681 JUNDP17535 347 aa13.46□□□□□ -0.25
HMGA2-204ENST00000403681 STOMP27105 288 aa13.46□□□□□ -0.25
HMGA2-204ENST00000403681 NOS3P29474 1203 aa13.46□□□□□ -0.25
HMGA2-204ENST00000403681 MASP1P48740 699 aa13.46□□□□□ -0.25
HMGA2-204ENST00000403681 RPL34P49207 117 aaKnown RBP13.46□□□□□ -0.25
HMGA2-204ENST00000403681 POLR2LP62875 67 aaKnown RBP13.46□□□□□ -0.25
HMGA2-204ENST00000403681 SREBF2Q12772 1141 aa13.46□□□□□ -0.25
HMGA2-204ENST00000403681 UGT8Q16880 541 aa13.46□□□□□ -0.25
HMGA2-204ENST00000403681 AAK1Q2M2I8 961 aa13.46□□□□□ -0.25
HMGA2-204ENST00000403681 ATAT1Q5SQI0 421 aa13.46□□□□□ -0.25
HMGA2-204ENST00000403681 CAPN13Q6MZZ7 669 aaPredicted RBP13.46□□□□□ -0.25
HMGA2-204ENST00000403681 ENTHD1Q8IYW4 607 aa13.46□□□□□ -0.25
HMGA2-204ENST00000403681 MEIOBQ8N635 442 aa13.46□□□□□ -0.25
HMGA2-204ENST00000403681 UBE2E3Q969T4 207 aa13.46□□□□□ -0.25
HMGA2-204ENST00000403681 MED30Q96HR3 178 aa13.46□□□□□ -0.25
HMGA2-204ENST00000403681 ZBED3Q96IU2 234 aaPredicted RBP13.46□□□□□ -0.25
HMGA2-204ENST00000403681 FCRL4Q96PJ5 515 aa13.46□□□□□ -0.25
HMGA2-204ENST00000403681 TMED9Q9BVK6 235 aa13.46□□□□□ -0.25
HMGA2-204ENST00000403681 PFDN2Q9UHV9 154 aa13.46□□□□□ -0.25
HMGA2-204ENST00000403681 SH3D21A4FU49 640 aa13.46□□□□□ -0.25
HMGA2-204ENST00000403681 OR6C75A6NL08 312 aa13.46□□□□□ -0.25
HMGA2-204ENST00000403681 SPNP16150 400 aa13.46□□□□□ -0.25
HMGA2-204ENST00000403681 HNMTP50135 292 aa13.46□□□□□ -0.25
HMGA2-204ENST00000403681 ZXDBP98169 803 aa13.46□□□□□ -0.25
HMGA2-204ENST00000403681 CCDC58Q4VC31 144 aa13.46□□□□□ -0.25
HMGA2-204ENST00000403681 DDX53Q86TM3 631 aaKnown RBP13.46□□□□□ -0.25
HMGA2-204ENST00000403681 SERPINA11Q86U17 422 aa13.46□□□□□ -0.25
HMGA2-204ENST00000403681 SLC22A15Q8IZD6 547 aa13.46□□□□□ -0.25
HMGA2-204ENST00000403681 GALNT6Q8NCL4 622 aa13.46□□□□□ -0.25
HMGA2-204ENST00000403681 EGLN2Q96KS0 407 aa13.46□□□□□ -0.25
HMGA2-204ENST00000403681 HYLS1Q96M11 299 aa13.46□□□□□ -0.25
HMGA2-204ENST00000403681 MCUBQ9NWR8 336 aa13.46□□□□□ -0.25
HMGA2-204ENST00000403681 OSGIN1Q9UJX0 560 aa13.46□□□□□ -0.25
HMGA2-204ENST00000403681 HCN2Q9UL51 889 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms