RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 ARHGAP11AQ6P4F7 1023 aa11.09□□□□□ -0.63
SPTLC1P3-201ENST00000403408 PPP1R21Q6ZMI0 780 aa11.09□□□□□ -0.63
SPTLC1P3-201ENST00000403408 LRRC6Q86X45 466 aa11.09□□□□□ -0.63
SPTLC1P3-201ENST00000403408 APCDD1LQ8NCL9 501 aa11.09□□□□□ -0.63
SPTLC1P3-201ENST00000403408 ASB11Q8WXH4 323 aa11.09□□□□□ -0.63
SPTLC1P3-201ENST00000403408 PEX13Q92968 403 aa11.09□□□□□ -0.63
SPTLC1P3-201ENST00000403408 MBD6Q96DN6 1003 aa11.09□□□□□ -0.63
SPTLC1P3-201ENST00000403408 MFSD3Q96ES6 412 aa11.09□□□□□ -0.63
SPTLC1P3-201ENST00000403408 NECTIN3Q9NQS3 549 aa11.09□□□□□ -0.63
SPTLC1P3-201ENST00000403408 TMEM184CQ9NVA4 438 aa11.09□□□□□ -0.63
SPTLC1P3-201ENST00000403408 TRMT1Q9NXH9 659 aaKnown RBP11.09□□□□□ -0.63
SPTLC1P3-201ENST00000403408 CRYL1Q9Y2S2 319 aa11.09□□□□□ -0.63
SPTLC1P3-201ENST00000403408 KLF13Q9Y2Y9 288 aaPredicted RBP11.09□□□□□ -0.63
SPTLC1P3-201ENST00000403408 REXO2Q9Y3B8 237 aaKnown RBP11.09□□□□□ -0.63
SPTLC1P3-201ENST00000403408 MRFAP1Q9Y605 127 aa11.09□□□□□ -0.63
SPTLC1P3-201ENST00000403408 ANK2Q01484 3957 aa11.09□□□□□ -0.63
SPTLC1P3-201ENST00000403408 IGKV3D-11A0A0A0MRZ8 115 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 SAGE2PA6NJ88 616 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 USP27XA6NNY8 438 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 ERI2A8K979 691 aaKnown RBP11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 A8MUA0 341 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 GFYI3L273 518 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 CDK2AP1O14519 115 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 CHST10O43529 356 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 KIF5CO60282 957 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 B4GALT2O60909 372 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 ATE1O95260 518 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 CCNDBP1O95273 360 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 FHP07954 510 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 CELA3AP09093 270 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 ZSCAN5DPP0CG00 497 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 MAOAP21397 527 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 DNASE1P24855 282 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 HOXC12P31275 282 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 PPARGP37231 505 aaPredicted RBP11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 SKIV2L2P42285 1042 aaKnown RBP11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 SESN2P58004 480 aaPredicted RBP11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 RPS15AP62244 130 aaKnown RBP11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 CUL1Q13616 776 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 MBOAT1Q6ZNC8 495 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 SEM1Q6ZVN7 128 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 CENPUQ71F23 418 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 BIVMQ86UB2 503 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 CLYBLQ8N0X4 340 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 CYP4X1Q8N118 509 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 TC2NQ8N9U0 490 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 FBXO15Q8NCQ5 510 aaPredicted RBP11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 ZNF740Q8NDX6 193 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 OR5M3Q8NGP4 307 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 OR1F2PQ96R84 312 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 CNPPD1Q9BV87 410 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 LACRTQ9GZZ8 138 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 ZDHHC11Q9H8X9 412 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 LIN28AQ9H9Z2 209 aaKnown RBP11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 ANKHQ9HCJ1 492 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 DMRT3Q9NQL9 472 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 ANAPC5Q9UJX4 755 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 CBLCQ9ULV8 474 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 CLDN16Q9Y5I7 305 aa11.08□□□□□ -0.64
SPTLC1P3-201ENST00000403408 TCRBV16S1A1N1A0A5B0 115 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 A6NNC1 897 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 KDM4EB2RXH2 506 aaPredicted RBP11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 C4orf51C9J302 202 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 G3V3Y1 287 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 GOLGA6L19H0YKK7 550 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 KLRC4-KLRK1H3BQV0 150 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 TGFBR3LH3BV60 316 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 GALR3O60755 368 aaPredicted RBP11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 GLSO94925 669 aaPredicted RBP11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 VAPBO95292 243 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 CATP04040 527 aaKnown RBP11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 CHRM3P20309 590 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 ACVR2AP27037 513 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 PPP2R1BP30154 601 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 GPR143P51810 404 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 TBPL1P62380 186 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 HYAL2Q12891 473 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 RPS6KA1Q15418 735 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 XKR6Q5GH73 641 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 PCID2Q5JVF3 399 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 ZNF585AQ6P3V2 769 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 ZNF549Q6P9A3 640 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 PAMR1Q6UXH9 720 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 ACAD11Q709F0 780 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 ASPGQ86U10 573 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 CYP4Z2PQ8N1L4 340 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 MPP5Q8N3R9 675 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 PPHLN1Q8NEY8 458 aaKnown RBP11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 OR10Q1Q8NGQ4 319 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 SLC13A3Q8WWT9 602 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 NANOS1Q8WY41 292 aaKnown RBP11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 TMEM125Q96AQ2 219 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 TBC1D20Q96BZ9 403 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 RMND5BQ96G75 393 aaPredicted RBP11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 MRFAP1L1Q96HT8 127 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 C18orf12Q96KH6 178 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 PTCHD1Q96NR3 888 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 ANP32EQ9BTT0 268 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 AICDAQ9GZX7 198 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 RAB6BQ9NRW1 208 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms