RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 NUDT17P0C025 328 aa18.18■□□□□ 0.5
RTN4-207ENST00000402434 SKP1P63208 163 aa18.18■□□□□ 0.5
RTN4-207ENST00000402434 HIST2H2ACQ16777 129 aaPredicted RBP18.18■□□□□ 0.5
RTN4-207ENST00000402434 DEFB134Q4QY38 66 aa18.18■□□□□ 0.5
RTN4-207ENST00000402434 HIST2H2AA3Q6FI13 130 aa18.18■□□□□ 0.5
RTN4-207ENST00000402434 KIRREL2Q6UWL6 708 aa18.18■□□□□ 0.5
RTN4-207ENST00000402434 LAS2Q8IYD9 372 aa18.18■□□□□ 0.5
RTN4-207ENST00000402434 PTGR2Q8N8N7 351 aaPredicted RBP18.18■□□□□ 0.5
RTN4-207ENST00000402434 OR51Q1Q8NH59 317 aa18.18■□□□□ 0.5
RTN4-207ENST00000402434 PHF21BQ96EK2 531 aa18.18■□□□□ 0.5
RTN4-207ENST00000402434 ABHD17AQ96GS6 310 aa18.18■□□□□ 0.5
RTN4-207ENST00000402434 YIPF2Q9BWQ6 316 aa18.18■□□□□ 0.5
RTN4-207ENST00000402434 PARD6BQ9BYG5 372 aa18.18■□□□□ 0.5
RTN4-207ENST00000402434 AICDAQ9GZX7 198 aa18.18■□□□□ 0.5
RTN4-207ENST00000402434 KLHL31Q9H511 634 aa18.18■□□□□ 0.5
RTN4-207ENST00000402434 CLK4Q9HAZ1 481 aaKnown RBP18.18■□□□□ 0.5
RTN4-207ENST00000402434 TMEM216Q9P0N5 145 aa18.18■□□□□ 0.5
RTN4-207ENST00000402434 CFAP46Q8IYW2 2715 aa18.17■□□□□ 0.5
RTN4-207ENST00000402434 LRIT2A6NDA9 550 aa18.17■□□□□ 0.5
RTN4-207ENST00000402434 ANKDD1BA6NHY2 528 aa18.17■□□□□ 0.5
RTN4-207ENST00000402434 IDSB3KWA1 339 aa18.17■□□□□ 0.5
RTN4-207ENST00000402434 MKRN2OSH3BPM6 223 aa18.17■□□□□ 0.5
RTN4-207ENST00000402434 GOLGA8RI6L899 631 aa18.17■□□□□ 0.5
RTN4-207ENST00000402434 SOCS6O14544 535 aa18.17■□□□□ 0.5
RTN4-207ENST00000402434 SMIM24O75264 130 aa18.17■□□□□ 0.5
RTN4-207ENST00000402434 CDH16O75309 829 aa18.17■□□□□ 0.5
RTN4-207ENST00000402434 RDH16O75452 317 aa18.17■□□□□ 0.5
RTN4-207ENST00000402434 DNAJB5O75953 348 aa18.17■□□□□ 0.5
RTN4-207ENST00000402434 C1QL1O75973 258 aa18.17■□□□□ 0.5
RTN4-207ENST00000402434 PRB1P04280 392 aa18.17■□□□□ 0.5
RTN4-207ENST00000402434 GSTA1P08263 222 aa18.17■□□□□ 0.5
RTN4-207ENST00000402434 ZNF888P0CJ79 500 aaPredicted RBP18.17■□□□□ 0.5
RTN4-207ENST00000402434 PYGBP11216 843 aa18.17■□□□□ 0.5
RTN4-207ENST00000402434 SLCO1A2P46721 670 aa18.17■□□□□ 0.5
RTN4-207ENST00000402434 PIK3CGP48736 1102 aa18.17■□□□□ 0.5
RTN4-207ENST00000402434 STXBP1P61764 594 aaKnown RBP18.17■□□□□ 0.5
RTN4-207ENST00000402434 CHAF1BQ13112 559 aa18.17■□□□□ 0.5
RTN4-207ENST00000402434 GTF2H2Q13888 395 aa18.17■□□□□ 0.5
RTN4-207ENST00000402434 ADPRMQ3LIE5 342 aa18.17■□□□□ 0.5
RTN4-207ENST00000402434 DCAF10Q5QP82 559 aa18.17■□□□□ 0.5
RTN4-207ENST00000402434 GTF2H2CQ6P1K8 395 aa18.17■□□□□ 0.5
RTN4-207ENST00000402434 PRSS58Q8IYP2 241 aa18.17■□□□□ 0.5
RTN4-207ENST00000402434 CYP4X1Q8N118 509 aa18.17■□□□□ 0.5
RTN4-207ENST00000402434 UBE2E3Q969T4 207 aa18.17■□□□□ 0.5
RTN4-207ENST00000402434 FER1L6-AS2Q96M78 137 aa18.17■□□□□ 0.5
RTN4-207ENST00000402434 SLC25A18Q9H1K4 315 aa18.17■□□□□ 0.5
RTN4-207ENST00000402434 ACSS2Q9NR19 701 aa18.17■□□□□ 0.5
RTN4-207ENST00000402434 C3orf18Q9UK00 162 aa18.17■□□□□ 0.5
RTN4-207ENST00000402434 RAB21Q9UL25 225 aa18.17■□□□□ 0.5
RTN4-207ENST00000402434 ANGPTL3Q9Y5C1 460 aa18.17■□□□□ 0.5
RTN4-207ENST00000402434 A0A1W2PPM1 405 aa18.16■□□□□ 0.5
RTN4-207ENST00000402434 EIF4E1BA6NMX2 242 aaKnown RBP18.16■□□□□ 0.5
RTN4-207ENST00000402434 CEACAM4O75871 244 aa18.16■□□□□ 0.5
RTN4-207ENST00000402434 EEF1DP29692 281 aaKnown RBP18.16■□□□□ 0.5
RTN4-207ENST00000402434 HNF4AP41235 474 aa18.16■□□□□ 0.5
RTN4-207ENST00000402434 EMP2P54851 167 aa18.16■□□□□ 0.5
RTN4-207ENST00000402434 LIPJQ5W064 366 aa18.16■□□□□ 0.5
RTN4-207ENST00000402434 ADNP2Q6IQ32 1131 aa18.16■□□□□ 0.5
RTN4-207ENST00000402434 GRHL2Q6ISB3 625 aa18.16■□□□□ 0.5
RTN4-207ENST00000402434 GOLGA7Q7Z5G4 137 aa18.16■□□□□ 0.5
RTN4-207ENST00000402434 SHISA5Q8N114 240 aa18.16■□□□□ 0.5
RTN4-207ENST00000402434 EPS8L3Q8TE67 593 aaKnown RBP18.16■□□□□ 0.5
RTN4-207ENST00000402434 MS4A6EQ96DS6 147 aa18.16■□□□□ 0.5
RTN4-207ENST00000402434 IPPKQ9H8X2 491 aa18.16■□□□□ 0.5
RTN4-207ENST00000402434 MLXIPLQ9NP71 852 aa18.16■□□□□ 0.5
RTN4-207ENST00000402434 HCN3Q9P1Z3 774 aa18.16■□□□□ 0.5
RTN4-207ENST00000402434 DCDC2Q9UHG0 476 aa18.16■□□□□ 0.5
RTN4-207ENST00000402434 A0A1W2PQ72 361 aa18.15■□□□□ 0.5
RTN4-207ENST00000402434 C4orf51C9J302 202 aa18.15■□□□□ 0.5
RTN4-207ENST00000402434 PCDH17O14917 1159 aa18.15■□□□□ 0.5
RTN4-207ENST00000402434 UGDHO60701 494 aa18.15■□□□□ 0.5
RTN4-207ENST00000402434 B3GALT4O96024 378 aa18.15■□□□□ 0.5
RTN4-207ENST00000402434 CYC1P08574 325 aa18.15■□□□□ 0.5
RTN4-207ENST00000402434 IL10P22301 178 aa18.15■□□□□ 0.5
RTN4-207ENST00000402434 HNRNPH1P31943 449 aaKnown RBP18.15■□□□□ 0.5
RTN4-207ENST00000402434 HPDP32754 393 aaPredicted RBP18.15■□□□□ 0.5
RTN4-207ENST00000402434 XCR1P46094 333 aa18.15■□□□□ 0.5
RTN4-207ENST00000402434 CCL11P51671 97 aa18.15■□□□□ 0.5
RTN4-207ENST00000402434 RAB8AP61006 207 aa18.15■□□□□ 0.5
RTN4-207ENST00000402434 RBBP7Q16576 425 aa18.15■□□□□ 0.5
RTN4-207ENST00000402434 TOR1AIP1Q5JTV8 583 aa18.15■□□□□ 0.5
RTN4-207ENST00000402434 TCTN3Q6NUS6 607 aa18.15■□□□□ 0.5
RTN4-207ENST00000402434 MED27Q6P2C8 311 aa18.15■□□□□ 0.5
RTN4-207ENST00000402434 ZNF843Q8N446 348 aa18.15■□□□□ 0.5
RTN4-207ENST00000402434 OR7G3Q8NG95 312 aa18.15■□□□□ 0.5
RTN4-207ENST00000402434 OR11G2Q8NGC1 345 aa18.15■□□□□ 0.5
RTN4-207ENST00000402434 C9orf43Q8TAL5 461 aaPredicted RBP18.15■□□□□ 0.5
RTN4-207ENST00000402434 GAL3ST3Q96A11 431 aa18.15■□□□□ 0.5
RTN4-207ENST00000402434 VPS50Q96JG6 964 aa18.15■□□□□ 0.5
RTN4-207ENST00000402434 C1QTNF3Q9BXJ4 246 aa18.15■□□□□ 0.5
RTN4-207ENST00000402434 PCTPQ9UKL6 214 aa18.15■□□□□ 0.5
RTN4-207ENST00000402434 MKL2Q9ULH7 1088 aa18.15■□□□□ 0.5
RTN4-207ENST00000402434 TSC22D4Q9Y3Q8 395 aa18.15■□□□□ 0.5
RTN4-207ENST00000402434 PCDHGA9Q9Y5G4 932 aaKnown RBP18.15■□□□□ 0.5
RTN4-207ENST00000402434 ZNF860A6NHJ4 632 aa18.14■□□□□ 0.5
RTN4-207ENST00000402434 A8MT66 165 aa18.14■□□□□ 0.5
RTN4-207ENST00000402434 FOXO6A8MYZ6 492 aa18.14■□□□□ 0.5
RTN4-207ENST00000402434 DNAJB6O75190 326 aa18.14■□□□□ 0.5
RTN4-207ENST00000402434 JRKO75564 520 aa18.14■□□□□ 0.5
RTN4-207ENST00000402434 TUBBP07437 444 aa18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms