RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 FBXO6Q9NRD1 293 aaPredicted RBP13.63□□□□□ -0.23
VAMP1-203ENST00000400911 NCOA6Q14686 2063 aaPredicted RBP13.63□□□□□ -0.23
VAMP1-203ENST00000400911 PCNX1Q96RV3 2341 aa13.62□□□□□ -0.23
VAMP1-203ENST00000400911 NIPBLQ6KC79 2804 aaeCLIP13.62□□□□□ -0.23
VAMP1-203ENST00000400911 USP27XA6NNY8 438 aa13.62□□□□□ -0.23
VAMP1-203ENST00000400911 KLRC4-KLRK1H3BQV0 150 aa13.62□□□□□ -0.23
VAMP1-203ENST00000400911 PEX1O43933 1283 aa13.62□□□□□ -0.23
VAMP1-203ENST00000400911 GALR3O60755 368 aaPredicted RBP13.62□□□□□ -0.23
VAMP1-203ENST00000400911 SLC35G6P0C7Q6 338 aa13.62□□□□□ -0.23
VAMP1-203ENST00000400911 CDH1P12830 882 aa13.62□□□□□ -0.23
VAMP1-203ENST00000400911 CD99P14209 185 aa13.62□□□□□ -0.23
VAMP1-203ENST00000400911 TFEBP19484 476 aa13.62□□□□□ -0.23
VAMP1-203ENST00000400911 MSX1P28360 303 aa13.62□□□□□ -0.23
VAMP1-203ENST00000400911 DNAJA1P31689 397 aaKnown RBP13.62□□□□□ -0.23
VAMP1-203ENST00000400911 GRK3P35626 688 aa13.62□□□□□ -0.23
VAMP1-203ENST00000400911 NR0B1P51843 470 aaKnown RBP13.62□□□□□ -0.23
VAMP1-203ENST00000400911 BTG2P78543 158 aa13.62□□□□□ -0.23
VAMP1-203ENST00000400911 CDK16Q00536 496 aa13.62□□□□□ -0.23
VAMP1-203ENST00000400911 PMPCAQ10713 525 aa13.62□□□□□ -0.23
VAMP1-203ENST00000400911 NAE1Q13564 534 aa13.62□□□□□ -0.23
VAMP1-203ENST00000400911 DEFB134Q4QY38 66 aa13.62□□□□□ -0.23
VAMP1-203ENST00000400911 CASC4Q6P4E1 433 aa13.62□□□□□ -0.23
VAMP1-203ENST00000400911 MBOAT1Q6ZNC8 495 aa13.62□□□□□ -0.23
VAMP1-203ENST00000400911 TMEM200AQ86VY9 491 aa13.62□□□□□ -0.23
VAMP1-203ENST00000400911 C16orf52Q8NHV5 167 aa13.62□□□□□ -0.23
VAMP1-203ENST00000400911 CD200R1Q8TD46 325 aa13.62□□□□□ -0.23
VAMP1-203ENST00000400911 PTCHD1Q96NR3 888 aa13.62□□□□□ -0.23
VAMP1-203ENST00000400911 BAG1Q99933 345 aaPredicted RBP13.62□□□□□ -0.23
VAMP1-203ENST00000400911 TMUB1Q9BVT8 246 aa13.62□□□□□ -0.23
VAMP1-203ENST00000400911 FAM129AQ9BZQ8 928 aa13.62□□□□□ -0.23
VAMP1-203ENST00000400911 ATG10Q9H0Y0 220 aa13.62□□□□□ -0.23
VAMP1-203ENST00000400911 CCDC68Q9H2F9 335 aa13.62□□□□□ -0.23
VAMP1-203ENST00000400911 ADAMTS6Q9UKP5 1117 aa13.62□□□□□ -0.23
VAMP1-203ENST00000400911 KLF13Q9Y2Y9 288 aaPredicted RBP13.62□□□□□ -0.23
VAMP1-203ENST00000400911 NDUFS4O43181 175 aa13.61□□□□□ -0.23
VAMP1-203ENST00000400911 OR1F1O43749 312 aa13.61□□□□□ -0.23
VAMP1-203ENST00000400911 SERPIND1P05546 499 aa13.61□□□□□ -0.23
VAMP1-203ENST00000400911 HOXD4P09016 255 aaPredicted RBP13.61□□□□□ -0.23
VAMP1-203ENST00000400911 NPPBP16860 134 aa13.61□□□□□ -0.23
VAMP1-203ENST00000400911 TPSB2P20231 275 aa13.61□□□□□ -0.23
VAMP1-203ENST00000400911 JAK1P23458 1154 aa13.61□□□□□ -0.23
VAMP1-203ENST00000400911 KCNJ1P48048 391 aa13.61□□□□□ -0.23
VAMP1-203ENST00000400911 ZNF75DP51815 510 aa13.61□□□□□ -0.23
VAMP1-203ENST00000400911 IST1P53990 364 aa13.61□□□□□ -0.23
VAMP1-203ENST00000400911 GPR85P60893 370 aa13.61□□□□□ -0.23
VAMP1-203ENST00000400911 MEF2AQ02078 507 aaPredicted RBP13.61□□□□□ -0.23
VAMP1-203ENST00000400911 THOC5Q13769 683 aaKnown RBP13.61□□□□□ -0.23
VAMP1-203ENST00000400911 DHX34Q14147 1143 aaKnown RBP13.61□□□□□ -0.23
VAMP1-203ENST00000400911 TPSAB1Q15661 275 aa13.61□□□□□ -0.23
VAMP1-203ENST00000400911 CES4AQ5XG92 561 aa13.61□□□□□ -0.23
VAMP1-203ENST00000400911 DRICH1Q6PGQ1 229 aaPredicted RBP13.61□□□□□ -0.23
VAMP1-203ENST00000400911 AGTRAPQ6RW13 159 aa13.61□□□□□ -0.23
VAMP1-203ENST00000400911 MDGA2Q7Z553 956 aa13.61□□□□□ -0.23
VAMP1-203ENST00000400911 NFAM1Q8NET5 270 aaPredicted RBP13.61□□□□□ -0.23
VAMP1-203ENST00000400911 OR52N2Q8NGI0 321 aa13.61□□□□□ -0.23
VAMP1-203ENST00000400911 DEFB126Q9BYW3 111 aa13.61□□□□□ -0.23
VAMP1-203ENST00000400911 TP63Q9H3D4 680 aaPredicted RBP13.61□□□□□ -0.23
VAMP1-203ENST00000400911 PDE10AQ9Y233 779 aa13.61□□□□□ -0.23
VAMP1-203ENST00000400911 SAGE2PA6NJ88 616 aa13.6□□□□□ -0.23
VAMP1-203ENST00000400911 A8MUA0 341 aa13.6□□□□□ -0.23
VAMP1-203ENST00000400911 FCHO1O14526 889 aa13.6□□□□□ -0.23
VAMP1-203ENST00000400911 HOXB4P17483 251 aaPredicted RBP13.6□□□□□ -0.23
VAMP1-203ENST00000400911 ALOX12P18054 663 aa13.6□□□□□ -0.23
VAMP1-203ENST00000400911 MAOAP21397 527 aa13.6□□□□□ -0.23
VAMP1-203ENST00000400911 TRIP13Q15645 432 aaPredicted RBP13.6□□□□□ -0.23
VAMP1-203ENST00000400911 EMC4Q5J8M3 183 aa13.6□□□□□ -0.23
VAMP1-203ENST00000400911 CAND1Q86VP6 1230 aaKnown RBP13.6□□□□□ -0.23
VAMP1-203ENST00000400911 ARMC10Q8N2F6 343 aa13.6□□□□□ -0.23
VAMP1-203ENST00000400911 TXLNBQ8N3L3 684 aa13.6□□□□□ -0.23
VAMP1-203ENST00000400911 RNF10Q8N5U6 811 aaKnown RBP13.6□□□□□ -0.23
VAMP1-203ENST00000400911 ZFP62Q8NB50 900 aaPredicted RBP13.6□□□□□ -0.23
VAMP1-203ENST00000400911 EEF1AKMT1Q8WVE0 214 aa13.6□□□□□ -0.23
VAMP1-203ENST00000400911 SEC16BQ96JE7 1060 aa13.6□□□□□ -0.23
VAMP1-203ENST00000400911 SGPP1Q9BX95 441 aa13.6□□□□□ -0.23
VAMP1-203ENST00000400911 DEFB127Q9H1M4 99 aa13.6□□□□□ -0.23
VAMP1-203ENST00000400911 PLSCR2Q9NRY7 297 aa13.6□□□□□ -0.23
VAMP1-203ENST00000400911 SAMD15Q9P1V8 674 aa13.6□□□□□ -0.23
VAMP1-203ENST00000400911 KCNN3Q9UGI6 736 aa13.6□□□□□ -0.23
VAMP1-203ENST00000400911 MED13LQ71F56 2210 aa13.6□□□□□ -0.23
VAMP1-203ENST00000400911 FAM237BA0A1B0GVD1 139 aa13.59□□□□□ -0.23
VAMP1-203ENST00000400911 CEP104O60308 925 aa13.59□□□□□ -0.23
VAMP1-203ENST00000400911 HAUS5O94927 633 aa13.59□□□□□ -0.23
VAMP1-203ENST00000400911 ZNF888P0CJ79 500 aaPredicted RBP13.59□□□□□ -0.23
VAMP1-203ENST00000400911 CCR8P51685 355 aa13.59□□□□□ -0.23
VAMP1-203ENST00000400911 NUP107P57740 925 aa13.59□□□□□ -0.23
VAMP1-203ENST00000400911 HYAL2Q12891 473 aa13.59□□□□□ -0.23
VAMP1-203ENST00000400911 MYBPHQ13203 477 aa13.59□□□□□ -0.23
VAMP1-203ENST00000400911 PWP1Q13610 501 aa13.59□□□□□ -0.23
VAMP1-203ENST00000400911 ARHGAP11AQ6P4F7 1023 aa13.59□□□□□ -0.23
VAMP1-203ENST00000400911 LCTLQ6UWM7 567 aa13.59□□□□□ -0.23
VAMP1-203ENST00000400911 QSOX2Q6ZRP7 698 aa13.59□□□□□ -0.23
VAMP1-203ENST00000400911 TMEM139Q8IV31 216 aa13.59□□□□□ -0.23
VAMP1-203ENST00000400911 CYP4Z2PQ8N1L4 340 aa13.59□□□□□ -0.23
VAMP1-203ENST00000400911 TMEM156Q8N614 296 aa13.59□□□□□ -0.23
VAMP1-203ENST00000400911 ABHD11Q8NFV4 315 aa13.59□□□□□ -0.23
VAMP1-203ENST00000400911 OR4K1Q8NGD4 311 aa13.59□□□□□ -0.23
VAMP1-203ENST00000400911 ZNF669Q96BR6 464 aaPredicted RBP13.59□□□□□ -0.23
VAMP1-203ENST00000400911 PARVBQ9HBI1 364 aa13.59□□□□□ -0.23
VAMP1-203ENST00000400911 NECTIN3Q9NQS3 549 aa13.59□□□□□ -0.23
VAMP1-203ENST00000400911 TRBV11-1A0A0K0K1C0 115 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms