RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 MT-ND3P03897 115 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 SLC2A2P11168 524 aaPredicted RBP2.39□□□□□ -2.03
CD47-203ENST00000398258 CYP3A5P20815 502 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 SERPINB6P35237 376 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 CRIP2P52943 208 aaPredicted RBP2.39□□□□□ -2.03
CD47-203ENST00000398258 UCP2P55851 309 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 STARD6P59095 220 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 KCNJ10P78508 379 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 AP1B1Q10567 949 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 EFTUD2Q15029 972 aaKnown RBP eCLIP2.39□□□□□ -2.03
CD47-203ENST00000398258 PTPN14Q15678 1187 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 TAB1Q15750 504 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 ARMCX4Q5H9R4 360 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 PRAMEF8Q5VWM4 474 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 PLPP4Q5VZY2 271 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 ALKBH5Q6P6C2 394 aaKnown RBP2.39□□□□□ -2.03
CD47-203ENST00000398258 DHRS11Q6UWP2 260 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 C15orf52Q6ZUT6 534 aaKnown RBP2.39□□□□□ -2.03
CD47-203ENST00000398258 SH2D5Q6ZV89 423 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 CYP4V2Q6ZWL3 525 aaPredicted RBP2.39□□□□□ -2.03
CD47-203ENST00000398258 SLC24A5Q71RS6 500 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 BTN2A1Q7KYR7 527 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 NOTCH2NLQ7Z3S9 236 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 ASPGQ86U10 573 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 LAX1Q8IWV1 398 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 SFRP1Q8N474 314 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 NIPA2Q8N8Q9 360 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 RTL3Q8N8U3 475 aaKnown RBP2.39□□□□□ -2.03
CD47-203ENST00000398258 CNBD1Q8NA66 436 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 KIAA0895Q8NCT3 520 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 KBTBD8Q8NFY9 601 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 PSMA8Q8TAA3 256 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 CD99L2Q8TCZ2 262 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 RNASE8Q8TDE3 154 aaKnown RBP2.39□□□□□ -2.03
CD47-203ENST00000398258 SUSD6Q92537 303 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 CASP10Q92851 521 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 ATP6V0A1Q93050 837 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 SNX21Q969T3 373 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 NKX3-1Q99801 234 aaPredicted RBP2.39□□□□□ -2.03
CD47-203ENST00000398258 ZNF559Q9BR84 538 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 CCM2Q9BSQ5 444 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 FUCA2Q9BTY2 467 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 EGLN1Q9GZT9 426 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 WWTR1Q9GZV5 400 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 P2RY12Q9H244 342 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 FNDC4Q9H6D8 234 aaPredicted RBP2.39□□□□□ -2.03
CD47-203ENST00000398258 ZNF696Q9H7X3 374 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 AKIRIN1Q9H9L7 192 aaPredicted RBP2.39□□□□□ -2.03
CD47-203ENST00000398258 PDRG1Q9NUG6 133 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.39□□□□□ -2.03
CD47-203ENST00000398258 HMG20BQ9P0W2 317 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 TRIM10Q9UDY6 481 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 SLC12A6Q9UHW9 1150 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 FBXW2Q9UKT8 454 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 NPHP3Q7Z494 1330 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 DHX29Q7Z478 1369 aaKnown RBP2.38□□□□□ -2.03
CD47-203ENST00000398258 A0A087X002 238 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 C5orf51A6NDU8 294 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 SLC9B1P1A6NJY1 282 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 C15orf61A6NNL5 157 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 M0R296 226 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 CACNB4O00305 520 aaPredicted RBP2.38□□□□□ -2.03
CD47-203ENST00000398258 ZBTB14O43829 449 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 VEGFDO43915 354 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 KIF5CO60282 957 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 CYTIPO60759 359 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 CLN5O75503 358 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 CRCPO75575 148 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 CDC123O75794 336 aaPredicted RBP2.38□□□□□ -2.03
CD47-203ENST00000398258 LETM1O95202 739 aaPredicted RBP2.38□□□□□ -2.03
CD47-203ENST00000398258 MMP10P09238 476 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 STMN1P16949 149 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 GOT1P17174 413 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 CTNNB1P35222 781 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 NME5P56597 212 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 YBEYP58557 167 aaPredicted RBP2.38□□□□□ -2.03
CD47-203ENST00000398258 DCDC1P59894 354 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 KRTAP10-1P60331 282 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 FKBP1BP68106 108 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 SP3Q02447 781 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 GUCY2DQ02846 1103 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 GPR50Q13585 617 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 PDE7AQ13946 482 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 PKN2Q16513 984 aaKnown RBP2.38□□□□□ -2.03
CD47-203ENST00000398258 DUSP5Q16690 384 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 ZNF876PQ49A33 203 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 GTDC1Q4AE62 458 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 ZNF542PQ5EBM4 170 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 OR4C11Q6IEV9 310 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 CD164L2Q6UWJ8 174 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 SIGLEC15Q6ZMC9 328 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 C5orf24Q7Z6I8 188 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 RABEPKQ7Z6M1 372 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 LACC1Q8IV20 430 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 ZC3H3Q8IXZ2 948 aaKnown RBP2.38□□□□□ -2.03
CD47-203ENST00000398258 TEX26Q8N6G2 289 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 SIDT2Q8NBJ9 832 aaKnown RBP2.38□□□□□ -2.03
CD47-203ENST00000398258 OR8H1Q8NGG4 311 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 OR4C15Q8NGM1 316 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 AZIN2Q96A70 460 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms