RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 IFI44LQ53G44 452 aa16.68■□□□□ 0.26
EWSR1-206ENST00000397938 UBE2R2Q712K3 238 aaPredicted RBP16.68■□□□□ 0.26
EWSR1-206ENST00000397938 C16orf59Q7L2K0 433 aa16.68■□□□□ 0.26
EWSR1-206ENST00000397938 NLRP8Q86W28 1048 aa16.68■□□□□ 0.26
EWSR1-206ENST00000397938 FYTTD1Q96QD9 318 aaKnown RBP16.68■□□□□ 0.26
EWSR1-206ENST00000397938 BBS2Q9BXC9 721 aa16.68■□□□□ 0.26
EWSR1-206ENST00000397938 MTMR11A4FU01 709 aa16.68■□□□□ 0.26
EWSR1-206ENST00000397938 BPIP17213 487 aa16.68■□□□□ 0.26
EWSR1-206ENST00000397938 ATP5C1P36542 298 aaKnown RBP16.68■□□□□ 0.26
EWSR1-206ENST00000397938 ALDH9A1P49189 494 aa16.68■□□□□ 0.26
EWSR1-206ENST00000397938 RORCP51449 518 aa16.68■□□□□ 0.26
EWSR1-206ENST00000397938 PCDH1Q08174 1060 aa16.68■□□□□ 0.26
EWSR1-206ENST00000397938 ASAH1Q13510 395 aa16.68■□□□□ 0.26
EWSR1-206ENST00000397938 PTGES3Q15185 160 aaKnown RBP16.68■□□□□ 0.26
EWSR1-206ENST00000397938 TAB1Q15750 504 aa16.68■□□□□ 0.26
EWSR1-206ENST00000397938 BBS7Q8IWZ6 715 aa16.68■□□□□ 0.26
EWSR1-206ENST00000397938 NAGSQ8N159 534 aa16.68■□□□□ 0.26
EWSR1-206ENST00000397938 VANGL1Q8TAA9 524 aaPredicted RBP16.68■□□□□ 0.26
EWSR1-206ENST00000397938 COQ8BQ96D53 544 aa16.68■□□□□ 0.26
EWSR1-206ENST00000397938 SLC22A4Q9H015 551 aa16.68■□□□□ 0.26
EWSR1-206ENST00000397938 NUFIP1Q9UHK0 495 aaKnown RBP16.68■□□□□ 0.26
EWSR1-206ENST00000397938 BTNL2Q9UIR0 455 aa16.68■□□□□ 0.26
EWSR1-206ENST00000397938 LINC00854A0A1B0GVQ3 168 aa16.67■□□□□ 0.26
EWSR1-206ENST00000397938 SCAMP2O15127 329 aaKnown RBP16.67■□□□□ 0.26
EWSR1-206ENST00000397938 PCDH7O60245 1069 aa16.67■□□□□ 0.26
EWSR1-206ENST00000397938 PIPP12273 146 aaPredicted RBP16.67■□□□□ 0.26
EWSR1-206ENST00000397938 ATF6P18850 670 aa16.67■□□□□ 0.26
EWSR1-206ENST00000397938 ENDOUP21128 410 aaKnown RBP16.67■□□□□ 0.26
EWSR1-206ENST00000397938 CHMP24386 653 aa16.67■□□□□ 0.26
EWSR1-206ENST00000397938 OR1E2P47887 323 aa16.67■□□□□ 0.26
EWSR1-206ENST00000397938 SCN1BQ07699 218 aa16.67■□□□□ 0.26
EWSR1-206ENST00000397938 GDPGP1Q6ZNW5 385 aa16.67■□□□□ 0.26
EWSR1-206ENST00000397938 NXPE1Q8N323 547 aa16.67■□□□□ 0.26
EWSR1-206ENST00000397938 FAM181AQ8N9Y4 354 aa16.67■□□□□ 0.26
EWSR1-206ENST00000397938 NLGN2Q8NFZ4 835 aa16.67■□□□□ 0.26
EWSR1-206ENST00000397938 COPS8Q99627 209 aa16.67■□□□□ 0.26
EWSR1-206ENST00000397938 TIGARQ9NQ88 270 aa16.67■□□□□ 0.26
EWSR1-206ENST00000397938 THSD1Q9NS62 852 aa16.67■□□□□ 0.26
EWSR1-206ENST00000397938 ACOXLQ9NUZ1 547 aa16.67■□□□□ 0.26
EWSR1-206ENST00000397938 CLN6Q9NWW5 311 aa16.67■□□□□ 0.26
EWSR1-206ENST00000397938 OGDHLQ9ULD0 1010 aa16.67■□□□□ 0.26
EWSR1-206ENST00000397938 SNX7Q9UNH6 387 aa16.67■□□□□ 0.26
EWSR1-206ENST00000397938 FCF1Q9Y324 198 aaKnown RBP16.67■□□□□ 0.26
EWSR1-206ENST00000397938 PRAMEF25A6NGN4 478 aa16.67■□□□□ 0.26
EWSR1-206ENST00000397938 SYN3O14994 580 aa16.67■□□□□ 0.26
EWSR1-206ENST00000397938 MPZL2O60487 215 aa16.67■□□□□ 0.26
EWSR1-206ENST00000397938 TRBC1P01850 177 aa16.67■□□□□ 0.26
EWSR1-206ENST00000397938 KLKB1P03952 638 aa16.67■□□□□ 0.26
EWSR1-206ENST00000397938 RHAGQ02094 409 aa16.67■□□□□ 0.26
EWSR1-206ENST00000397938 SMARCB1Q12824 385 aa16.67■□□□□ 0.26
EWSR1-206ENST00000397938 TRIM60Q495X7 471 aa16.67■□□□□ 0.26
EWSR1-206ENST00000397938 SLC44A2Q8IWA5 706 aaPredicted RBP16.67■□□□□ 0.26
EWSR1-206ENST00000397938 FAM129BQ96TA1 746 aa16.67■□□□□ 0.26
EWSR1-206ENST00000397938 MAPKAP1Q9BPZ7 522 aa16.67■□□□□ 0.26
EWSR1-206ENST00000397938 SLC12A9Q9BXP2 914 aa16.67■□□□□ 0.26
EWSR1-206ENST00000397938 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.67■□□□□ 0.26
EWSR1-206ENST00000397938 RPRD1BQ9NQG5 326 aaKnown RBP16.67■□□□□ 0.26
EWSR1-206ENST00000397938 FTSJ1Q9UET6 329 aa16.67■□□□□ 0.26
EWSR1-206ENST00000397938 LSM2Q9Y333 95 aaKnown RBP16.67■□□□□ 0.26
EWSR1-206ENST00000397938 ZAR1LA6NP61 321 aa16.66■□□□□ 0.26
EWSR1-206ENST00000397938 NT5C1B-RDH14C9J2C7 533 aa16.66■□□□□ 0.26
EWSR1-206ENST00000397938 ERVH48-1M5A8F1 160 aa16.66■□□□□ 0.26
EWSR1-206ENST00000397938 VNN2O95498 520 aa16.66■□□□□ 0.26
EWSR1-206ENST00000397938 POU2F1P14859 743 aa16.66■□□□□ 0.26
EWSR1-206ENST00000397938 JUPP14923 745 aa16.66■□□□□ 0.26
EWSR1-206ENST00000397938 SOX3P41225 446 aa16.66■□□□□ 0.26
EWSR1-206ENST00000397938 DUSP7Q16829 419 aa16.66■□□□□ 0.26
EWSR1-206ENST00000397938 SMUG1Q53HV7 270 aa16.66■□□□□ 0.26
EWSR1-206ENST00000397938 ZNF648Q5T619 568 aaPredicted RBP16.66■□□□□ 0.26
EWSR1-206ENST00000397938 GLB1LQ6UWU2 654 aa16.66■□□□□ 0.26
EWSR1-206ENST00000397938 NPAS3Q8IXF0 933 aa16.66■□□□□ 0.26
EWSR1-206ENST00000397938 RDH10Q8IZV5 341 aa16.66■□□□□ 0.26
EWSR1-206ENST00000397938 GTPBP3Q969Y2 492 aaKnown RBP16.66■□□□□ 0.26
EWSR1-206ENST00000397938 CWH43Q9H720 699 aa16.66■□□□□ 0.26
EWSR1-206ENST00000397938 SNTG1Q9NSN8 517 aa16.66■□□□□ 0.26
EWSR1-206ENST00000397938 DNAJC11Q9NVH1 559 aa16.66■□□□□ 0.26
EWSR1-206ENST00000397938 RUVBL1Q9Y265 456 aaKnown RBP16.66■□□□□ 0.26
EWSR1-206ENST00000397938 SLC22A14Q9Y267 594 aa16.66■□□□□ 0.26
EWSR1-206ENST00000397938 CMAHPQ9Y471 501 aa16.66■□□□□ 0.26
EWSR1-206ENST00000397938 IQCMA0A1B0GVH7 501 aa16.66■□□□□ 0.26
EWSR1-206ENST00000397938 CCDC182A6NF36 153 aa16.66■□□□□ 0.26
EWSR1-206ENST00000397938 GJB5O95377 273 aa16.66■□□□□ 0.26
EWSR1-206ENST00000397938 CLDN7O95471 211 aa16.66■□□□□ 0.26
EWSR1-206ENST00000397938 MLLT3P42568 568 aaPredicted RBP16.66■□□□□ 0.26
EWSR1-206ENST00000397938 CHIT1Q13231 466 aa16.66■□□□□ 0.26
EWSR1-206ENST00000397938 MRPL58Q14197 206 aaKnown RBP16.66■□□□□ 0.26
EWSR1-206ENST00000397938 GPR33Q49SQ1 333 aa16.66■□□□□ 0.26
EWSR1-206ENST00000397938 PTCHD4Q6ZW05 846 aa16.66■□□□□ 0.26
EWSR1-206ENST00000397938 VWA5B2Q8N398 1253 aa16.66■□□□□ 0.26
EWSR1-206ENST00000397938 MED30Q96HR3 178 aa16.66■□□□□ 0.26
EWSR1-206ENST00000397938 C19orf43Q9BQ61 176 aa16.66■□□□□ 0.26
EWSR1-206ENST00000397938 VPS29Q9UBQ0 182 aa16.66■□□□□ 0.26
EWSR1-206ENST00000397938 SEC14L4Q9UDX3 406 aa16.66■□□□□ 0.26
EWSR1-206ENST00000397938 ENOPH1Q9UHY7 261 aa16.66■□□□□ 0.26
EWSR1-206ENST00000397938 OR6C75A6NL08 312 aa16.65■□□□□ 0.26
EWSR1-206ENST00000397938 ZNF670-ZNF695F2Z2N8 137 aa16.65■□□□□ 0.26
EWSR1-206ENST00000397938 ALPPP05187 535 aa16.65■□□□□ 0.26
EWSR1-206ENST00000397938 SLC10A3P09131 477 aa16.65■□□□□ 0.26
EWSR1-206ENST00000397938 CBLP22681 906 aa16.65■□□□□ 0.26
EWSR1-206ENST00000397938 ITPKAP23677 461 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms