RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 PDCD4Q53EL6 469 aaKnown RBP18.52■□□□□ 0.56
PDLIM2-204ENST00000397760 MTX3Q5HYI7 312 aa18.52■□□□□ 0.56
PDLIM2-204ENST00000397760 C6orf136Q5SQH8 315 aa18.52■□□□□ 0.56
PDLIM2-204ENST00000397760 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.52■□□□□ 0.56
PDLIM2-204ENST00000397760 CYP2R1Q6VVX0 501 aa18.52■□□□□ 0.56
PDLIM2-204ENST00000397760 RBM44Q6ZP01 1051 aaKnown RBP18.52■□□□□ 0.56
PDLIM2-204ENST00000397760 C17orf82Q86X59 251 aaPredicted RBP18.52■□□□□ 0.56
PDLIM2-204ENST00000397760 FAM20CQ8IXL6 584 aa18.52■□□□□ 0.56
PDLIM2-204ENST00000397760 LAS2Q8IYD9 372 aa18.52■□□□□ 0.56
PDLIM2-204ENST00000397760 KRT78Q8N1N4 520 aa18.52■□□□□ 0.56
PDLIM2-204ENST00000397760 METTL25Q8N6Q8 603 aa18.52■□□□□ 0.56
PDLIM2-204ENST00000397760 ZNF740Q8NDX6 193 aa18.52■□□□□ 0.56
PDLIM2-204ENST00000397760 OR2L3Q8NG85 312 aa18.52■□□□□ 0.56
PDLIM2-204ENST00000397760 OR10G6Q8NH81 332 aa18.52■□□□□ 0.56
PDLIM2-204ENST00000397760 CANT1Q8WVQ1 401 aa18.52■□□□□ 0.56
PDLIM2-204ENST00000397760 MTERF1Q99551 399 aaKnown RBP18.52■□□□□ 0.56
PDLIM2-204ENST00000397760 AIF1LQ9BQI0 150 aa18.52■□□□□ 0.56
PDLIM2-204ENST00000397760 PRM3Q9NNZ6 103 aa18.52■□□□□ 0.56
PDLIM2-204ENST00000397760 PCDHA9Q9Y5H5 950 aa18.52■□□□□ 0.56
PDLIM2-204ENST00000397760 ARHGEF17Q96PE2 2063 aaPredicted RBP18.52■□□□□ 0.56
PDLIM2-204ENST00000397760 DHRS12A0PJE2 317 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 PPM1DO15297 605 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 UMPSP11172 480 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 POLR2CP19387 275 aaPredicted RBP18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 ATP6V1B2P21281 511 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 CXCR2P25025 360 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 PSMA4P25789 261 aaKnown RBP18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 CMPK1P30085 196 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 BIRC2Q13490 618 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 DDX39BQ13838 428 aaKnown RBP18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 NRF1Q16656 503 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 AP5B1Q2VPB7 878 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 HLA-BQ31612 363 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 VPS26BQ4G0F5 336 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 NHSL2Q5HYW2 709 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 RNF175Q8N4F7 328 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 OR4K1Q8NGD4 311 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 HUS1BQ8NHY5 278 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 UBE2E3Q969T4 207 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 PPWD1Q96BP3 646 aaKnown RBP18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 PPP3R2Q96LZ3 170 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 TWSG1Q9GZX9 223 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 SEMA6AQ9H2E6 1030 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 C11orf16Q9NQ32 467 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 ZIM2Q9NZV7 527 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 MYRFQ9Y2G1 1151 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 IGKV1-8A0A0C4DH67 115 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 A0A1B0GTQ1 180 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 H3BNH8 94 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 TNFRSF10AO00220 468 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 GALR2O43603 387 aaPredicted RBP18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 EEDO75530 441 aaKnown RBP18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 KCNK10P57789 538 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 AASDHQ4L235 1098 aaPredicted RBP18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 ADNP2Q6IQ32 1131 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 TMIGD1Q6UXZ0 262 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 ADCK2Q7Z695 626 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 FNDC5Q8NAU1 212 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 TSPAN14Q8NG11 270 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 C9orf16Q9BUW7 83 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 AGPAT4Q9NRZ5 378 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 TUBA8Q9NY65 449 aaPredicted RBP18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 ACTR10Q9NZ32 417 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 PCDHGB4Q9UN71 923 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 PCDHGB5Q9Y5G0 923 aa18.51■□□□□ 0.55
PDLIM2-204ENST00000397760 USP34Q70CQ2 3546 aa18.5■□□□□ 0.55
PDLIM2-204ENST00000397760 GSAPA4D1B5 854 aa18.5■□□□□ 0.55
PDLIM2-204ENST00000397760 PATE3B3GLJ2 98 aa18.5■□□□□ 0.55
PDLIM2-204ENST00000397760 AKAP10O43572 662 aa18.5■□□□□ 0.55
PDLIM2-204ENST00000397760 OR6B1O95007 311 aa18.5■□□□□ 0.55
PDLIM2-204ENST00000397760 FASP25445 335 aa18.5■□□□□ 0.55
PDLIM2-204ENST00000397760 EEFSECP57772 596 aaKnown RBP18.5■□□□□ 0.55
PDLIM2-204ENST00000397760 ERVK-8P63133 956 aa18.5■□□□□ 0.55
PDLIM2-204ENST00000397760 CSNK1G2P78368 415 aa18.5■□□□□ 0.55
PDLIM2-204ENST00000397760 CSTF3Q12996 717 aaKnown RBP18.5■□□□□ 0.55
PDLIM2-204ENST00000397760 GK3PQ14409 553 aa18.5■□□□□ 0.55
PDLIM2-204ENST00000397760 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.5■□□□□ 0.55
PDLIM2-204ENST00000397760 C14orf28Q4W4Y0 310 aa18.5■□□□□ 0.55
PDLIM2-204ENST00000397760 C6orf132Q5T0Z8 1188 aa18.5■□□□□ 0.55
PDLIM2-204ENST00000397760 KIAA1614Q5VZ46 1190 aa18.5■□□□□ 0.55
PDLIM2-204ENST00000397760 KRT80Q6KB66 452 aa18.5■□□□□ 0.55
PDLIM2-204ENST00000397760 GPR156Q8NFN8 814 aa18.5■□□□□ 0.55
PDLIM2-204ENST00000397760 TFAP2CQ92754 450 aa18.5■□□□□ 0.55
PDLIM2-204ENST00000397760 OR2A14Q96R47 310 aa18.5■□□□□ 0.55
PDLIM2-204ENST00000397760 CIB1Q99828 191 aa18.5■□□□□ 0.55
PDLIM2-204ENST00000397760 LRTM1Q9HBL6 345 aa18.5■□□□□ 0.55
PDLIM2-204ENST00000397760 CAPN10Q9HC96 672 aa18.5■□□□□ 0.55
PDLIM2-204ENST00000397760 SLC6A20Q9NP91 592 aa18.5■□□□□ 0.55
PDLIM2-204ENST00000397760 HRASLS2Q9NWW9 162 aa18.5■□□□□ 0.55
PDLIM2-204ENST00000397760 CMTM6Q9NX76 183 aa18.5■□□□□ 0.55
PDLIM2-204ENST00000397760 LEF1Q9UJU2 399 aaPredicted RBP18.5■□□□□ 0.55
PDLIM2-204ENST00000397760 ENTPD2Q9Y5L3 495 aa18.5■□□□□ 0.55
PDLIM2-204ENST00000397760 TNRC6BQ9UPQ9 1833 aaKnown RBP18.49■□□□□ 0.55
PDLIM2-204ENST00000397760 MAGEB17A8MXT2 336 aa18.49■□□□□ 0.55
PDLIM2-204ENST00000397760 SEC22BO75396 215 aa18.49■□□□□ 0.55
PDLIM2-204ENST00000397760 RSL1D1O76021 490 aaKnown RBP18.49■□□□□ 0.55
PDLIM2-204ENST00000397760 HSD3B1P14060 373 aa18.49■□□□□ 0.55
PDLIM2-204ENST00000397760 HSD3B2P26439 372 aa18.49■□□□□ 0.55
PDLIM2-204ENST00000397760 EPHA8P29322 1005 aaPredicted RBP18.49■□□□□ 0.55
PDLIM2-204ENST00000397760 REEP5Q00765 189 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 328.7 ms