RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 UTP15Q8TED0 518 aaKnown RBP24.04■■□□□ 1.44
TSPAN4-207ENST00000397411 VPS50Q96JG6 964 aa24.04■■□□□ 1.44
TSPAN4-207ENST00000397411 SPSB2Q99619 263 aa24.04■■□□□ 1.44
TSPAN4-207ENST00000397411 ACSS2Q9NR19 701 aa24.04■■□□□ 1.44
TSPAN4-207ENST00000397411 SEMA3GQ9NS98 782 aa24.04■■□□□ 1.44
TSPAN4-207ENST00000397411 COPG2Q9UBF2 871 aa24.04■■□□□ 1.44
TSPAN4-207ENST00000397411 C3orf18Q9UK00 162 aa24.04■■□□□ 1.44
TSPAN4-207ENST00000397411 KCNMB2Q9Y691 235 aa24.04■■□□□ 1.44
TSPAN4-207ENST00000397411 ZNF860A6NHJ4 632 aa24.03■■□□□ 1.44
TSPAN4-207ENST00000397411 A8MT66 165 aa24.03■■□□□ 1.44
TSPAN4-207ENST00000397411 ERLIN1O75477 346 aa24.03■■□□□ 1.44
TSPAN4-207ENST00000397411 HEXBP07686 556 aa24.03■■□□□ 1.44
TSPAN4-207ENST00000397411 UMODP07911 640 aa24.03■■□□□ 1.44
TSPAN4-207ENST00000397411 FAM87AP0C7U9 286 aa24.03■■□□□ 1.44
TSPAN4-207ENST00000397411 CD22P20273 847 aa24.03■■□□□ 1.44
TSPAN4-207ENST00000397411 ATP5F1P24539 256 aaPredicted RBP24.03■■□□□ 1.44
TSPAN4-207ENST00000397411 RRADP55042 308 aa24.03■■□□□ 1.44
TSPAN4-207ENST00000397411 POLE2P56282 527 aa24.03■■□□□ 1.44
TSPAN4-207ENST00000397411 PCDH1Q08174 1060 aa24.03■■□□□ 1.44
TSPAN4-207ENST00000397411 ATP1A4Q13733 1029 aa24.03■■□□□ 1.44
TSPAN4-207ENST00000397411 GRHL2Q6ISB3 625 aa24.03■■□□□ 1.44
TSPAN4-207ENST00000397411 TMEM151AQ8N4L1 468 aa24.03■■□□□ 1.44
TSPAN4-207ENST00000397411 LSM14AQ8ND56 463 aaKnown RBP24.03■■□□□ 1.44
TSPAN4-207ENST00000397411 REPS1Q96D71 796 aa24.03■■□□□ 1.44
TSPAN4-207ENST00000397411 IQCGQ9H095 443 aaKnown RBP24.03■■□□□ 1.44
TSPAN4-207ENST00000397411 RHBGQ9H310 441 aa24.03■■□□□ 1.44
TSPAN4-207ENST00000397411 GALR3O60755 368 aaPredicted RBP24.02■■□□□ 1.44
TSPAN4-207ENST00000397411 CLDN9O95484 217 aa24.02■■□□□ 1.44
TSPAN4-207ENST00000397411 SBK3P0C264 359 aa24.02■■□□□ 1.44
TSPAN4-207ENST00000397411 SFTPCP11686 197 aa24.02■■□□□ 1.44
TSPAN4-207ENST00000397411 MMP11P24347 488 aa24.02■■□□□ 1.44
TSPAN4-207ENST00000397411 SERPINB1P30740 379 aa24.02■■□□□ 1.44
TSPAN4-207ENST00000397411 CRHR1P34998 444 aa24.02■■□□□ 1.44
TSPAN4-207ENST00000397411 SNRPNP63162 240 aaKnown RBP24.02■■□□□ 1.44
TSPAN4-207ENST00000397411 BTN3A2P78410 334 aa24.02■■□□□ 1.44
TSPAN4-207ENST00000397411 TGM3Q08188 693 aa24.02■■□□□ 1.44
TSPAN4-207ENST00000397411 DDX39BQ13838 428 aaKnown RBP24.02■■□□□ 1.44
TSPAN4-207ENST00000397411 LY6DQ14210 128 aa24.02■■□□□ 1.44
TSPAN4-207ENST00000397411 PDSS2Q86YH6 399 aa24.02■■□□□ 1.44
TSPAN4-207ENST00000397411 SLC22A9Q8IVM8 553 aa24.02■■□□□ 1.44
TSPAN4-207ENST00000397411 C4orf33Q8N1A6 199 aa24.02■■□□□ 1.44
TSPAN4-207ENST00000397411 AFAP1L2Q8N4X5 818 aa24.02■■□□□ 1.44
TSPAN4-207ENST00000397411 GAL3ST3Q96A11 431 aa24.02■■□□□ 1.44
TSPAN4-207ENST00000397411 FER1L6-AS2Q96M78 137 aa24.02■■□□□ 1.44
TSPAN4-207ENST00000397411 SEMA4BQ9NPR2 832 aaPredicted RBP24.02■■□□□ 1.44
TSPAN4-207ENST00000397411 ADGRE2Q9UHX3 823 aa24.02■■□□□ 1.44
TSPAN4-207ENST00000397411 PCTPQ9UKL6 214 aa24.02■■□□□ 1.44
TSPAN4-207ENST00000397411 PCDHGA11Q9Y5H2 935 aa24.02■■□□□ 1.44
TSPAN4-207ENST00000397411 IGLV3-12A0A075B6K2 115 aa24.01■■□□□ 1.43
TSPAN4-207ENST00000397411 A0A088AWK7 358 aa24.01■■□□□ 1.43
TSPAN4-207ENST00000397411 LRIT2A6NDA9 550 aa24.01■■□□□ 1.43
TSPAN4-207ENST00000397411 ERI3O43414 337 aaKnown RBP24.01■■□□□ 1.43
TSPAN4-207ENST00000397411 DLX3O60479 287 aa24.01■■□□□ 1.43
TSPAN4-207ENST00000397411 UGDHO60701 494 aa24.01■■□□□ 1.43
TSPAN4-207ENST00000397411 B3GALT4O96024 378 aa24.01■■□□□ 1.43
TSPAN4-207ENST00000397411 MYL2P10916 166 aa24.01■■□□□ 1.43
TSPAN4-207ENST00000397411 ZNF10P21506 573 aaPredicted RBP24.01■■□□□ 1.43
TSPAN4-207ENST00000397411 XCR1P46094 333 aa24.01■■□□□ 1.43
TSPAN4-207ENST00000397411 CCL11P51671 97 aa24.01■■□□□ 1.43
TSPAN4-207ENST00000397411 PHEXP78562 749 aa24.01■■□□□ 1.43
TSPAN4-207ENST00000397411 HYAL2Q12891 473 aa24.01■■□□□ 1.43
TSPAN4-207ENST00000397411 CPSF6Q16630 551 aaKnown RBP eCLIP24.01■■□□□ 1.43
TSPAN4-207ENST00000397411 CCDC153Q494R4 210 aa24.01■■□□□ 1.43
TSPAN4-207ENST00000397411 TRIM40Q6P9F5 258 aa24.01■■□□□ 1.43
TSPAN4-207ENST00000397411 MED25Q71SY5 747 aa24.01■■□□□ 1.43
TSPAN4-207ENST00000397411 PPP1R32Q7Z5V6 425 aa24.01■■□□□ 1.43
TSPAN4-207ENST00000397411 MILR1Q7Z6M3 343 aa24.01■■□□□ 1.43
TSPAN4-207ENST00000397411 MRGPREQ86SM8 312 aa24.01■■□□□ 1.43
TSPAN4-207ENST00000397411 LAPTM4BQ86VI4 370 aa24.01■■□□□ 1.43
TSPAN4-207ENST00000397411 TMEM151BQ8IW70 566 aa24.01■■□□□ 1.43
TSPAN4-207ENST00000397411 OR7G3Q8NG95 312 aa24.01■■□□□ 1.43
TSPAN4-207ENST00000397411 SLC39A7Q92504 469 aa24.01■■□□□ 1.43
TSPAN4-207ENST00000397411 NACC2Q96BF6 587 aa24.01■■□□□ 1.43
TSPAN4-207ENST00000397411 TGIF2Q9GZN2 237 aa24.01■■□□□ 1.43
TSPAN4-207ENST00000397411 REXO4Q9GZR2 422 aaKnown RBP24.01■■□□□ 1.43
TSPAN4-207ENST00000397411 ING2Q9H160 280 aa24.01■■□□□ 1.43
TSPAN4-207ENST00000397411 P4HTMQ9NXG6 502 aa24.01■■□□□ 1.43
TSPAN4-207ENST00000397411 MKL2Q9ULH7 1088 aa24.01■■□□□ 1.43
TSPAN4-207ENST00000397411 RNF11Q9Y3C5 154 aa24.01■■□□□ 1.43
TSPAN4-207ENST00000397411 SUPT7LO94864 414 aa24■■□□□ 1.43
TSPAN4-207ENST00000397411 PLA2G16P53816 162 aa24■■□□□ 1.43
TSPAN4-207ENST00000397411 HERVK_113P63132 956 aa24■■□□□ 1.43
TSPAN4-207ENST00000397411 OLR1P78380 273 aa24■■□□□ 1.43
TSPAN4-207ENST00000397411 CHAF1BQ13112 559 aa24■■□□□ 1.43
TSPAN4-207ENST00000397411 KRT71Q3SY84 523 aa24■■□□□ 1.43
TSPAN4-207ENST00000397411 MINDY4Q4G0A6 757 aa24■■□□□ 1.43
TSPAN4-207ENST00000397411 TTC19Q6DKK2 380 aaPredicted RBP24■■□□□ 1.43
TSPAN4-207ENST00000397411 SH2D5Q6ZV89 423 aa24■■□□□ 1.43
TSPAN4-207ENST00000397411 CHSY3Q70JA7 882 aa24■■□□□ 1.43
TSPAN4-207ENST00000397411 LAS2Q8IYD9 372 aa24■■□□□ 1.43
TSPAN4-207ENST00000397411 TMEM102Q8N9M5 508 aaPredicted RBP24■■□□□ 1.43
TSPAN4-207ENST00000397411 MS4A6EQ96DS6 147 aa24■■□□□ 1.43
TSPAN4-207ENST00000397411 CCDC126Q96EE4 140 aa24■■□□□ 1.43
TSPAN4-207ENST00000397411 PEX11GQ96HA9 241 aa24■■□□□ 1.43
TSPAN4-207ENST00000397411 NSUN5Q96P11 429 aaKnown RBP24■■□□□ 1.43
TSPAN4-207ENST00000397411 ERVK-6Q9BXR3 956 aa24■■□□□ 1.43
TSPAN4-207ENST00000397411 COPS7BQ9H9Q2 264 aaPredicted RBP24■■□□□ 1.43
TSPAN4-207ENST00000397411 LGALS13Q9UHV8 139 aa24■■□□□ 1.43
TSPAN4-207ENST00000397411 A0A0G2JN53 185 aa23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 IDSB3KWA1 339 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms