RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 ZNF385BQ569K4 471 aa22.84■■□□□ 1.25
PABPN1-202ENST00000397276 RBM48Q5RL73 367 aaKnown RBP22.84■■□□□ 1.25
PABPN1-202ENST00000397276 TMEM240Q5SV17 173 aa22.84■■□□□ 1.25
PABPN1-202ENST00000397276 C9orf64Q5T6V5 341 aa22.84■■□□□ 1.25
PABPN1-202ENST00000397276 FAM180BQ6P0A1 224 aa22.84■■□□□ 1.25
PABPN1-202ENST00000397276 SLX1AQ9BQ83 275 aa22.84■■□□□ 1.25
PABPN1-202ENST00000397276 GIN1Q9NXP7 522 aa22.84■■□□□ 1.25
PABPN1-202ENST00000397276 LINC01553A4QN01 128 aa22.84■■□□□ 1.25
PABPN1-202ENST00000397276 POP7O75817 140 aaKnown RBP22.84■■□□□ 1.25
PABPN1-202ENST00000397276 SHQ1Q6PI26 577 aaKnown RBP22.84■■□□□ 1.25
PABPN1-202ENST00000397276 SLCO6A1Q86UG4 719 aa22.84■■□□□ 1.25
PABPN1-202ENST00000397276 HORMAD1Q86X24 394 aa22.84■■□□□ 1.25
PABPN1-202ENST00000397276 MMAAQ8IVH4 418 aaKnown RBP22.84■■□□□ 1.25
PABPN1-202ENST00000397276 ZNF547Q8IVP9 402 aa22.84■■□□□ 1.25
PABPN1-202ENST00000397276 NRSN1Q8IZ57 195 aa22.84■■□□□ 1.25
PABPN1-202ENST00000397276 NAGSQ8N159 534 aa22.84■■□□□ 1.25
PABPN1-202ENST00000397276 VPS37AQ8NEZ2 397 aa22.84■■□□□ 1.25
PABPN1-202ENST00000397276 OR4A15Q8NGL6 344 aa22.84■■□□□ 1.25
PABPN1-202ENST00000397276 HDAC2Q92769 488 aaKnown RBP22.84■■□□□ 1.25
PABPN1-202ENST00000397276 ATAD3AQ9NVI7 634 aa22.84■■□□□ 1.25
PABPN1-202ENST00000397276 PDP1Q9P0J1 537 aaPredicted RBP22.84■■□□□ 1.25
PABPN1-202ENST00000397276 ZNF197O14709 1029 aa22.84■■□□□ 1.25
PABPN1-202ENST00000397276 BCKDKO14874 412 aa22.84■■□□□ 1.25
PABPN1-202ENST00000397276 HNRNPA1P09651 372 aaKnown RBP eCLIP22.84■■□□□ 1.25
PABPN1-202ENST00000397276 ARHGDIAP52565 204 aa22.84■■□□□ 1.25
PABPN1-202ENST00000397276 INAVAQ3KP66 663 aa22.84■■□□□ 1.25
PABPN1-202ENST00000397276 ZNF852Q6ZMS4 543 aa22.84■■□□□ 1.25
PABPN1-202ENST00000397276 SMG7Q92540 1137 aaKnown RBP22.84■■□□□ 1.25
PABPN1-202ENST00000397276 EXO1Q9UQ84 846 aaKnown RBP22.84■■□□□ 1.25
PABPN1-202ENST00000397276 GPC6Q9Y625 555 aaPredicted RBP22.84■■□□□ 1.25
PABPN1-202ENST00000397276 KDM1AO60341 852 aa22.83■■□□□ 1.25
PABPN1-202ENST00000397276 LILRB5O75023 590 aa22.83■■□□□ 1.25
PABPN1-202ENST00000397276 OXSR1O95747 527 aaPredicted RBP22.83■■□□□ 1.25
PABPN1-202ENST00000397276 ZNF8P17098 575 aaPredicted RBP22.83■■□□□ 1.25
PABPN1-202ENST00000397276 IL1RNP18510 177 aa22.83■■□□□ 1.25
PABPN1-202ENST00000397276 TIA1P31483 386 aaKnown RBP eCLIP22.83■■□□□ 1.254e-16■■■■■ 56.4
PABPN1-202ENST00000397276 NPAS3Q8IXF0 933 aa22.83■■□□□ 1.25
PABPN1-202ENST00000397276 WDR48Q8TAF3 677 aa22.83■■□□□ 1.25
PABPN1-202ENST00000397276 NDNFQ8TB73 568 aa22.83■■□□□ 1.25
PABPN1-202ENST00000397276 RPS6KA6Q9UK32 745 aa22.83■■□□□ 1.25
PABPN1-202ENST00000397276 SAMHD1Q9Y3Z3 626 aaKnown RBP22.83■■□□□ 1.25
PABPN1-202ENST00000397276 DYRK1BQ9Y463 629 aa22.83■■□□□ 1.25
PABPN1-202ENST00000397276 ADRB3P13945 408 aa22.83■■□□□ 1.24
PABPN1-202ENST00000397276 CRATP43155 626 aa22.83■■□□□ 1.24
PABPN1-202ENST00000397276 MAPK11Q15759 364 aa22.83■■□□□ 1.24
PABPN1-202ENST00000397276 CARTPTQ16568 116 aa22.83■■□□□ 1.24
PABPN1-202ENST00000397276 ZNF691Q5VV52 312 aa22.83■■□□□ 1.24
PABPN1-202ENST00000397276 ARMCX6Q7L4S7 300 aa22.83■■□□□ 1.24
PABPN1-202ENST00000397276 ITPKCQ96DU7 683 aa22.83■■□□□ 1.24
PABPN1-202ENST00000397276 DEC1Q9P2X7 70 aa22.83■■□□□ 1.24
PABPN1-202ENST00000397276 CFAP20Q9Y6A4 193 aaKnown RBP22.83■■□□□ 1.24
PABPN1-202ENST00000397276 REV3LO60673 3130 aa22.82■■□□□ 1.24
PABPN1-202ENST00000397276 OPN1SWP03999 348 aa22.82■■□□□ 1.24
PABPN1-202ENST00000397276 HOXA9P31269 272 aa22.82■■□□□ 1.24
PABPN1-202ENST00000397276 ASMTP46597 345 aa22.82■■□□□ 1.24
PABPN1-202ENST00000397276 TAP2Q03519 686 aa22.82■■□□□ 1.24
PABPN1-202ENST00000397276 OCA2Q04671 838 aa22.82■■□□□ 1.24
PABPN1-202ENST00000397276 ZNF33BQ06732 778 aa22.82■■□□□ 1.24
PABPN1-202ENST00000397276 ZNF846Q147U1 533 aa22.82■■□□□ 1.24
PABPN1-202ENST00000397276 SPIN4Q56A73 249 aa22.82■■□□□ 1.24
PABPN1-202ENST00000397276 PAGE2BQ5JRK9 111 aa22.82■■□□□ 1.24
PABPN1-202ENST00000397276 TMEM236Q5W0B7 351 aa22.82■■□□□ 1.24
PABPN1-202ENST00000397276 COMMD6Q7Z4G1 85 aa22.82■■□□□ 1.24
PABPN1-202ENST00000397276 OR8D1Q8WZ84 308 aa22.82■■□□□ 1.24
PABPN1-202ENST00000397276 CIDECQ96AQ7 238 aaPredicted RBP22.82■■□□□ 1.24
PABPN1-202ENST00000397276 TMEM121BQ9BXQ6 578 aaPredicted RBP22.82■■□□□ 1.24
PABPN1-202ENST00000397276 AKIP1Q9NQ31 210 aa22.82■■□□□ 1.24
PABPN1-202ENST00000397276 ENPP5Q9UJA9 477 aa22.82■■□□□ 1.24
PABPN1-202ENST00000397276 HEPACAM2A8MVW5 462 aa22.82■■□□□ 1.24
PABPN1-202ENST00000397276 HSD3B1P14060 373 aa22.82■■□□□ 1.24
PABPN1-202ENST00000397276 HSD3B2P26439 372 aa22.82■■□□□ 1.24
PABPN1-202ENST00000397276 EPHA2P29317 976 aa22.82■■□□□ 1.24
PABPN1-202ENST00000397276 FOXD4Q12950 439 aaPredicted RBP22.82■■□□□ 1.24
PABPN1-202ENST00000397276 PPIGQ13427 754 aaKnown RBP eCLIP22.82■■□□□ 1.242e-13■■■□□ 17.4
PABPN1-202ENST00000397276 RGNQ15493 299 aa22.82■■□□□ 1.24
PABPN1-202ENST00000397276 PLA2G15Q8NCC3 412 aa22.82■■□□□ 1.24
PABPN1-202ENST00000397276 PIK3C3Q8NEB9 887 aa22.82■■□□□ 1.24
PABPN1-202ENST00000397276 OR9A1PQ8NGU1 263 aa22.82■■□□□ 1.24
PABPN1-202ENST00000397276 PRKAG2Q9UGJ0 569 aa22.82■■□□□ 1.24
PABPN1-202ENST00000397276 TNFRSF1BP20333 461 aa22.81■■□□□ 1.24
PABPN1-202ENST00000397276 FMO3P31513 532 aa22.81■■□□□ 1.24
PABPN1-202ENST00000397276 RCVRNP35243 200 aa22.81■■□□□ 1.24
PABPN1-202ENST00000397276 HNRNPA1L2Q32P51 320 aaKnown RBP22.81■■□□□ 1.24
PABPN1-202ENST00000397276 ZNF658BQ4V348 819 aaPredicted RBP22.81■■□□□ 1.24
PABPN1-202ENST00000397276 FAM83HQ6ZRV2 1179 aaPredicted RBP22.81■■□□□ 1.24
PABPN1-202ENST00000397276 CBLL1Q75N03 491 aa22.81■■□□□ 1.24
PABPN1-202ENST00000397276 ZNF784Q8NCA9 323 aaPredicted RBP22.81■■□□□ 1.24
PABPN1-202ENST00000397276 HCAR2Q8TDS4 363 aa22.81■■□□□ 1.24
PABPN1-202ENST00000397276 ASPSCR1Q9BZE9 553 aa22.81■■□□□ 1.24
PABPN1-202ENST00000397276 TM9SF3Q9HD45 589 aa22.81■■□□□ 1.24
PABPN1-202ENST00000397276 SPASTQ9UBP0 616 aa22.81■■□□□ 1.24
PABPN1-202ENST00000397276 ACSL6Q9UKU0 697 aa22.81■■□□□ 1.24
PABPN1-202ENST00000397276 ASF1AQ9Y294 204 aa22.81■■□□□ 1.24
PABPN1-202ENST00000397276 C1orf226A1L170 272 aa22.81■■□□□ 1.24
PABPN1-202ENST00000397276 PIPSLA2A3N6 862 aa22.81■■□□□ 1.24
PABPN1-202ENST00000397276 SLC1A7O00341 560 aa22.81■■□□□ 1.24
PABPN1-202ENST00000397276 UGT2B11O75310 529 aa22.81■■□□□ 1.24
PABPN1-202ENST00000397276 HBA1P69905 142 aa22.81■■□□□ 1.24
PABPN1-202ENST00000397276 DNAH14Q0VDD8 3507 aa22.81■■□□□ 1.24
PABPN1-202ENST00000397276 ZNF234Q14588 700 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms