RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 TBC1D3DA0A087WVF3 549 aa14.32□□□□□ -0.12
CBX3-202ENST00000396386 TBC1D3IA0A087WXS9 549 aa14.32□□□□□ -0.12
CBX3-202ENST00000396386 TBC1D3EA0A087X179 549 aa14.32□□□□□ -0.12
CBX3-202ENST00000396386 TBC1D3KA0A087X1G2 549 aa14.32□□□□□ -0.12
CBX3-202ENST00000396386 TBC1D3FA6NER0 549 aaPredicted RBP14.32□□□□□ -0.12
CBX3-202ENST00000396386 TBC1D3LB9A6J9 549 aa14.32□□□□□ -0.12
CBX3-202ENST00000396386 GPR37L1O60883 481 aa14.32□□□□□ -0.12
CBX3-202ENST00000396386 ABCB1P08183 1280 aaPredicted RBP14.32□□□□□ -0.12
CBX3-202ENST00000396386 IL3P08700 152 aa14.32□□□□□ -0.12
CBX3-202ENST00000396386 TBC1D3HP0C7X1 549 aa14.32□□□□□ -0.12
CBX3-202ENST00000396386 PKLRP30613 574 aa14.32□□□□□ -0.12
CBX3-202ENST00000396386 KDELR2P33947 212 aa14.32□□□□□ -0.12
CBX3-202ENST00000396386 PCGF2P35227 344 aa14.32□□□□□ -0.12
CBX3-202ENST00000396386 RAB28P51157 221 aa14.32□□□□□ -0.12
CBX3-202ENST00000396386 CYP4F2P78329 520 aa14.32□□□□□ -0.12
CBX3-202ENST00000396386 MC1RQ01726 317 aa14.32□□□□□ -0.12
CBX3-202ENST00000396386 BIRC2Q13490 618 aa14.32□□□□□ -0.12
CBX3-202ENST00000396386 MYBPC3Q14896 1274 aa14.32□□□□□ -0.12
CBX3-202ENST00000396386 NADK2Q4G0N4 442 aa14.32□□□□□ -0.12
CBX3-202ENST00000396386 IER5LQ5T953 404 aa14.32□□□□□ -0.12
CBX3-202ENST00000396386 TBC1D3GQ6DHY5 549 aa14.32□□□□□ -0.12
CBX3-202ENST00000396386 TBC1D3CQ6IPX1 549 aa14.32□□□□□ -0.12
CBX3-202ENST00000396386 ABRAXAS1Q6UWZ7 409 aa14.32□□□□□ -0.12
CBX3-202ENST00000396386 CHRDL2Q6WN34 429 aa14.32□□□□□ -0.12
CBX3-202ENST00000396386 PATL1Q86TB9 770 aaKnown RBP14.32□□□□□ -0.12
CBX3-202ENST00000396386 ZDHHC21Q8IVQ6 265 aa14.32□□□□□ -0.12
CBX3-202ENST00000396386 TBC1D3Q8IZP1 549 aaPredicted RBP14.32□□□□□ -0.12
CBX3-202ENST00000396386 ZNF786Q8N393 782 aa14.32□□□□□ -0.12
CBX3-202ENST00000396386 METTL25Q8N6Q8 603 aa14.32□□□□□ -0.12
CBX3-202ENST00000396386 LINC01555Q8NAE3 123 aa14.32□□□□□ -0.12
CBX3-202ENST00000396386 OR4K1Q8NGD4 311 aa14.32□□□□□ -0.12
CBX3-202ENST00000396386 OR5K1Q8NHB7 308 aa14.32□□□□□ -0.12
CBX3-202ENST00000396386 CAMK1GQ96NX5 476 aa14.32□□□□□ -0.12
CBX3-202ENST00000396386 MYOCQ99972 504 aa14.32□□□□□ -0.12
CBX3-202ENST00000396386 MIEF1Q9NQG6 463 aa14.32□□□□□ -0.12
CBX3-202ENST00000396386 AP1M2Q9Y6Q5 423 aa14.32□□□□□ -0.12
CBX3-202ENST00000396386 PLXND1Q9Y4D7 1925 aa14.32□□□□□ -0.12
CBX3-202ENST00000396386 PRR19A6NJB7 356 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 PLPP1O14494 284 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 LATO43561 262 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 E2F6O75461 281 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 KLHL18O94889 574 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 C6orf47O95873 294 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 IST1P53990 364 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 PPP2CBP62714 309 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 PPP2CAP67775 309 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 EPS8Q12929 822 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 KRT33BQ14525 404 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 RGNQ15493 299 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 CNPY1Q3B7I2 92 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.31□□□□□ -0.12
CBX3-202ENST00000396386 SPESP1Q6UW49 350 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 USP51Q70EK9 711 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 PAGE2Q7Z2X7 111 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 OFCC1Q8IZS5 231 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 TRIML2Q8N7C3 387 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 ANKRD53Q8N9V6 530 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 OR2L8Q8NGY9 312 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 ASB12Q8WXK4 309 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 SIPA1Q96FS4 1042 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 RBM4BQ9BQ04 359 aaKnown RBP14.31□□□□□ -0.12
CBX3-202ENST00000396386 SLC35A5Q9BS91 424 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 RBM4Q9BWF3 364 aaKnown RBP14.31□□□□□ -0.12
CBX3-202ENST00000396386 SORBS1Q9BX66 1292 aaKnown RBP14.31□□□□□ -0.12
CBX3-202ENST00000396386 NCKAP1Q9Y2A7 1128 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 GPSM3Q9Y4H4 160 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 PDZK1P1A8MUH7 402 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 SLC31A1O15431 190 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 TPP2P29144 1249 aaPredicted RBP14.31□□□□□ -0.12
CBX3-202ENST00000396386 TUBA4AP68366 448 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 HBA1P69905 142 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 PPP2R2BQ00005 443 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.31□□□□□ -0.12
CBX3-202ENST00000396386 CCNYL2Q5T2Q4 361 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 DEPDC1Q5TB30 811 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 ANGPTL8Q6UXH0 198 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 USP30Q70CQ3 517 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 CBLL1Q75N03 491 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 EIF3MQ7L2H7 374 aaKnown RBP14.31□□□□□ -0.12
CBX3-202ENST00000396386 CIDECQ96AQ7 238 aaPredicted RBP14.31□□□□□ -0.12
CBX3-202ENST00000396386 MSLNLQ96KJ4 702 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 OSBPL10Q9BXB5 764 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 ASPSCR1Q9BZE9 553 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 SOX17Q9H6I2 414 aaPredicted RBP14.31□□□□□ -0.12
CBX3-202ENST00000396386 MVB12BQ9H7P6 319 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 PLEKHM1Q9Y4G2 1056 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 MAGED1Q9Y5V3 778 aaPredicted RBP14.31□□□□□ -0.12
CBX3-202ENST00000396386 PIAS3Q9Y6X2 628 aa14.31□□□□□ -0.12
CBX3-202ENST00000396386 FEZF1A0PJY2 475 aa14.3□□□□□ -0.12
CBX3-202ENST00000396386 H7BY64 318 aa14.3□□□□□ -0.12
CBX3-202ENST00000396386 NDUFS4O43181 175 aa14.3□□□□□ -0.12
CBX3-202ENST00000396386 KIF1CO43896 1103 aaKnown RBP14.3□□□□□ -0.12
CBX3-202ENST00000396386 SEC24DO94855 1032 aaPredicted RBP14.3□□□□□ -0.12
CBX3-202ENST00000396386 CLIC3O95833 236 aa14.3□□□□□ -0.12
CBX3-202ENST00000396386 SEMG1P04279 462 aa14.3□□□□□ -0.12
CBX3-202ENST00000396386 DRD1P21728 446 aa14.3□□□□□ -0.12
CBX3-202ENST00000396386 DCTP40126 519 aa14.3□□□□□ -0.12
CBX3-202ENST00000396386 MAPK12P53778 367 aa14.3□□□□□ -0.12
CBX3-202ENST00000396386 KIAA1024LP59773 190 aa14.3□□□□□ -0.12
CBX3-202ENST00000396386 MRPS21P82921 87 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms