RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 SYTL3Q4VX76 610 aa15.38■□□□□ 0.05
CCHCR1-202ENST00000396263 NDNFQ8TB73 568 aa15.38■□□□□ 0.05
CCHCR1-202ENST00000396263 TMEM159Q96B96 161 aa15.38■□□□□ 0.05
CCHCR1-202ENST00000396263 TPD52L3Q96J77 140 aa15.38■□□□□ 0.05
CCHCR1-202ENST00000396263 RHNO1Q9BSD3 238 aa15.38■□□□□ 0.05
CCHCR1-202ENST00000396263 FBXO8Q9NRD0 319 aa15.38■□□□□ 0.05
CCHCR1-202ENST00000396263 ADPRHL2Q9NX46 363 aa15.38■□□□□ 0.05
CCHCR1-202ENST00000396263 TSPAN11A1L157 253 aa15.38■□□□□ 0.05
CCHCR1-202ENST00000396263 TMEM229AB2RXF0 380 aa15.38■□□□□ 0.05
CCHCR1-202ENST00000396263 NEDD8-MDP1E9PL57 170 aa15.38■□□□□ 0.05
CCHCR1-202ENST00000396263 NPC1O15118 1278 aa15.38■□□□□ 0.05
CCHCR1-202ENST00000396263 TSPAN6O43657 245 aa15.38■□□□□ 0.05
CCHCR1-202ENST00000396263 FADS2O95864 444 aaKnown RBP15.38■□□□□ 0.05
CCHCR1-202ENST00000396263 IMPA1P29218 277 aa15.38■□□□□ 0.05
CCHCR1-202ENST00000396263 PPM1AP35813 382 aa15.38■□□□□ 0.05
CCHCR1-202ENST00000396263 TPTEP56180 551 aa15.38■□□□□ 0.05
CCHCR1-202ENST00000396263 CSNK2BP67870 215 aa15.38■□□□□ 0.05
CCHCR1-202ENST00000396263 GAB1Q13480 694 aa15.38■□□□□ 0.05
CCHCR1-202ENST00000396263 TEAD4Q15561 434 aa15.38■□□□□ 0.05
CCHCR1-202ENST00000396263 INAVAQ3KP66 663 aa15.38■□□□□ 0.05
CCHCR1-202ENST00000396263 ZNF648Q5T619 568 aaPredicted RBP15.38■□□□□ 0.05
CCHCR1-202ENST00000396263 AGAP7PQ5VUJ5 663 aa15.38■□□□□ 0.05
CCHCR1-202ENST00000396263 CCDC81Q6ZN84 652 aa15.38■□□□□ 0.05
CCHCR1-202ENST00000396263 ADIPOR2Q86V24 386 aa15.38■□□□□ 0.05
CCHCR1-202ENST00000396263 OR7G3Q8NG95 312 aa15.38■□□□□ 0.05
CCHCR1-202ENST00000396263 DYNC2LI1Q8TCX1 351 aa15.38■□□□□ 0.05
CCHCR1-202ENST00000396263 BTN2A2Q8WVV5 523 aa15.38■□□□□ 0.05
CCHCR1-202ENST00000396263 APH1BQ8WW43 257 aa15.38■□□□□ 0.05
CCHCR1-202ENST00000396263 CLIP3Q96DZ5 547 aa15.38■□□□□ 0.05
CCHCR1-202ENST00000396263 HRASLS5Q96KN8 279 aa15.38■□□□□ 0.05
CCHCR1-202ENST00000396263 DOHHQ9BU89 302 aa15.38■□□□□ 0.05
CCHCR1-202ENST00000396263 RIOK2Q9BVS4 552 aaKnown RBP15.38■□□□□ 0.05
CCHCR1-202ENST00000396263 ZNF282Q9UDV7 671 aaPredicted RBP15.38■□□□□ 0.05
CCHCR1-202ENST00000396263 PCDHGB3Q9Y5G1 929 aa15.38■□□□□ 0.05
CCHCR1-202ENST00000396263 PCM1Q15154 2024 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 SLC5A10A0PJK1 596 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 RNASET2O00584 256 aaKnown RBP15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 PCDHGA12O60330 932 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 C8AP07357 584 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 PSMB9P28065 219 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 MAPK9P45984 424 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 SERPINB10P48595 397 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 PRLHRP49683 370 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 IFITM2Q01629 132 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 DMC1Q14565 340 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 HKDC1Q2TB90 917 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 CCSMST1Q4G0I0 132 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 ADNP2Q6IQ32 1131 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 LILRA6Q6PI73 481 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 HUS1BQ8NHY5 278 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 CXorf40BQ96DE9 158 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 VPS35Q96QK1 796 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 ZBP1Q9H171 429 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 FAM8A1Q9UBU6 413 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 VPS4AQ9UN37 437 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 DOCK6Q96HP0 2047 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 SLC16A8O95907 504 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 TIMP2P16035 220 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 PTPN2P17706 415 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 TIA1P31483 386 aaKnown RBP eCLIP15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 GRK3P35626 688 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 CTSCP53634 463 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 VBP1P61758 197 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 FADDQ13158 208 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 CCDC149Q6ZUS6 474 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 FAM124AQ86V42 546 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 ENTHD1Q8IYW4 607 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 ZNF557Q8N988 423 aaPredicted RBP15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 RASGEF1AQ8N9B8 481 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 C11orf65Q8NCR3 313 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 PHF10Q8WUB8 498 aaKnown RBP15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 PKP4Q99569 1192 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 ASAH2Q9NR71 780 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 RASSF1Q9NS23 344 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 PCDHGA6Q9Y5G7 932 aa15.37■□□□□ 0.05
CCHCR1-202ENST00000396263 OR2A25A4D2G3 310 aa15.36■□□□□ 0.05
CCHCR1-202ENST00000396263 ANKRD34BA5PLL1 514 aa15.36■□□□□ 0.05
CCHCR1-202ENST00000396263 MGAT4DA6NG13 374 aa15.36■□□□□ 0.05
CCHCR1-202ENST00000396263 ATG13O75143 517 aa15.36■□□□□ 0.05
CCHCR1-202ENST00000396263 GCM2O75603 506 aaPredicted RBP15.36■□□□□ 0.05
CCHCR1-202ENST00000396263 LEFTY1O75610 366 aa15.36■□□□□ 0.05
CCHCR1-202ENST00000396263 NADKO95544 446 aaPredicted RBP15.36■□□□□ 0.05
CCHCR1-202ENST00000396263 TGM1P22735 817 aa15.36■□□□□ 0.05
CCHCR1-202ENST00000396263 BDKRB1P46663 353 aa15.36■□□□□ 0.05
CCHCR1-202ENST00000396263 PREPP48147 710 aa15.36■□□□□ 0.05
CCHCR1-202ENST00000396263 PXNP49023 591 aaPredicted RBP15.36■□□□□ 0.05
CCHCR1-202ENST00000396263 NKX2-5P52952 324 aaPredicted RBP15.36■□□□□ 0.05
CCHCR1-202ENST00000396263 PNLIPRP1P54315 467 aa15.36■□□□□ 0.05
CCHCR1-202ENST00000396263 DGCR6Q14129 220 aa15.36■□□□□ 0.05
CCHCR1-202ENST00000396263 ZNF284Q2VY69 593 aa15.36■□□□□ 0.05
CCHCR1-202ENST00000396263 UBE2UQ5VVX9 321 aa15.36■□□□□ 0.05
CCHCR1-202ENST00000396263 GOT1L1Q8NHS2 421 aaPredicted RBP15.36■□□□□ 0.05
CCHCR1-202ENST00000396263 FOXJ1Q92949 421 aa15.36■□□□□ 0.05
CCHCR1-202ENST00000396263 MAL2Q969L2 176 aa15.36■□□□□ 0.05
CCHCR1-202ENST00000396263 UBE2FQ969M7 185 aa15.36■□□□□ 0.05
CCHCR1-202ENST00000396263 BHLHE41Q9C0J9 482 aaPredicted RBP15.36■□□□□ 0.05
CCHCR1-202ENST00000396263 PMF1-BGLAPU3KQ54 211 aa15.36■□□□□ 0.05
CCHCR1-202ENST00000396263 CLDN24A6NM45 220 aa15.36■□□□□ 0.05
CCHCR1-202ENST00000396263 PSMD11O00231 422 aa15.36■□□□□ 0.05
CCHCR1-202ENST00000396263 TOR1BO14657 336 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms