RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 KDM4FA0A1W2PPD8 638 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 CXorf49A8MYA2 514 aaPredicted RBP5.28□□□□□ -1.56
VPS13C-204ENST00000395898 DFNA5O60443 496 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 PRAMEF11O60813 436 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 BCAS2O75934 225 aaPredicted RBP5.28□□□□□ -1.56
VPS13C-204ENST00000395898 PRKD3O94806 890 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 ACRP10323 421 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 GP1BBP13224 206 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 HSD3B1P14060 373 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 EFNA1P20827 205 aaPredicted RBP5.28□□□□□ -1.56
VPS13C-204ENST00000395898 CD9P21926 228 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 HSD3B2P26439 372 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 TLE2Q04725 743 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 KLF1Q13351 362 aaPredicted RBP5.28□□□□□ -1.56
VPS13C-204ENST00000395898 NFATC2Q13469 925 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 DSG2Q14126 1118 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 SLC36A4Q6YBV0 504 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 POF1BQ8WVV4 589 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 C17orf62Q9BQA9 187 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 MKLN1Q9UL63 735 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 C14orf166Q9Y224 244 aaKnown RBP5.28□□□□□ -1.56
VPS13C-204ENST00000395898 MTMR11A4FU01 709 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 DLDP09622 509 aaKnown RBP5.28□□□□□ -1.56
VPS13C-204ENST00000395898 G6PDP11413 515 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 UQCRC2P22695 453 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 GJA9P57773 515 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 RPS13P62277 151 aaKnown RBP5.28□□□□□ -1.56
VPS13C-204ENST00000395898 CDKL1Q00532 357 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 LASP1Q14847 261 aaKnown RBP5.28□□□□□ -1.56
VPS13C-204ENST00000395898 C22orf39Q6P5X5 142 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 ZNF420Q8TAQ5 688 aaPredicted RBP5.28□□□□□ -1.56
VPS13C-204ENST00000395898 TMBIM1Q969X1 311 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 ZNF382Q96SR6 550 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 TBX5Q99593 518 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 YIPF4Q9BSR8 244 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 REEP4Q9H6H4 257 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 METTL7AQ9H8H3 244 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 ZNF224Q9NZL3 707 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 ABCD2Q9UBJ2 740 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 STYXL1Q9Y6J8 313 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 SNED1Q8TER0 1413 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 TRBC2A0A5B9 178 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 ZNF878C9JN71 531 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 NPC1O15118 1278 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 TBX10O75333 385 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 MT-ND5P03915 603 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 FMO3P31513 532 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 DPP6P42658 865 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 PIM3Q86V86 326 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 CMTR2Q8IYT2 770 aaKnown RBP5.28□□□□□ -1.56
VPS13C-204ENST00000395898 TOMM5Q8N4H5 51 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 YIPF7Q8N8F6 280 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 UCK2Q9BZX2 261 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.28□□□□□ -1.56
VPS13C-204ENST00000395898 OR2AT4A6NND4 320 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 SLC16A5O15375 505 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 CCND3P30281 292 aaPredicted RBP5.28□□□□□ -1.56
VPS13C-204ENST00000395898 SLC6A6P31641 620 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 SUOXP51687 545 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 E2F1Q01094 437 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 FADDQ13158 208 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 ELAVL3Q14576 367 aaKnown RBP5.28□□□□□ -1.56
VPS13C-204ENST00000395898 WDR45BQ5MNZ6 344 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 LRRC69Q6ZNQ3 347 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 TIGD4Q8IY51 512 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 SHKBP1Q8TBC3 707 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 TMED9Q9BVK6 235 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 ADAM7Q9H2U9 754 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 DPAGT1Q9H3H5 408 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 TM9SF3Q9HD45 589 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 HCN4Q9Y3Q4 1203 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 HYKKA2RU49 373 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 TSPAN6O43657 245 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 MMP20O60882 483 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 MAZP56270 477 aaKnown RBP5.28□□□□□ -1.56
VPS13C-204ENST00000395898 TRAM2Q15035 370 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 CNPY1Q3B7I2 92 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 TXNDC8Q6A555 127 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 DGLUCYQ7Z3D6 616 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 ZSWIM9Q86XI8 627 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 CEP97Q8IW35 865 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 SPAG16Q8N0X2 631 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 EBF2Q9HAK2 575 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 CENPMQ9NSP4 180 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 TAS2R10Q9NYW0 307 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 SCP2D1Q9UJQ7 156 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 CFAP20Q9Y6A4 193 aaKnown RBP5.28□□□□□ -1.56
VPS13C-204ENST00000395898 KCPQ6ZWJ8 1503 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 FOXO6A8MYZ6 492 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 IL33O95760 270 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 LATS1O95835 1130 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 PRKCGP05129 697 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 YES1P07947 543 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 TCEA1P23193 301 aaKnown RBP5.28□□□□□ -1.56
VPS13C-204ENST00000395898 ACRV1P26436 265 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 KCNQ1P51787 676 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 CEBPGP53567 150 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 RABGGTBP53611 331 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 SEC23BQ15437 767 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 GNPDA2Q8TDQ7 276 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms