RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 PRPF38BQ5VTL8 546 aaKnown RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 OTUD1Q5VV17 481 aaPredicted RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 GARNL3Q5VVW2 1013 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 ZC3H14Q6PJT7 736 aaKnown RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 CRTC3Q6UUV7 619 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 HIST3H2AQ7L7L0 130 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 ERMP1Q7Z2K6 904 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 HUS1BQ8NHY5 278 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 UTP15Q8TED0 518 aaKnown RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 HIST1H2ACQ93077 130 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 CCDC115Q96NT0 180 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 NLGN3Q9NZ94 848 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 CLCA3PQ9Y6N3 262 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 EPCAMP16422 314 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 TSPAN8P19075 237 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 CTHP32929 405 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 GSK3BP49841 420 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 CXCR4P61073 352 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 IL5RAQ01344 420 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 PTGR1Q14914 329 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 KLHL22Q53GT1 634 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 GCNT6Q5T4J0 391 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 VWA5B1Q5TIE3 1220 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 FOXR1Q6PIV2 292 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 ENPP7Q6UWV6 458 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 FAM46DQ8NEK8 389 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 CNBD2Q96M20 576 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 CIB1Q99828 191 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 BCL7BQ9BQE9 202 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 DOHHQ9BU89 302 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 YIPF2Q9BWQ6 316 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 SCHIP1Q9P0W5 487 aaPredicted RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 MARCH4Q9P2E8 410 aaPredicted RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 ANKMY1Q9P2S6 941 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 BTRCQ9Y297 605 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 OR51B4Q9Y5P0 310 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 TTC34A8MYJ7 566 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 ZNF701M0R085 212 aaPredicted RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 SEMA4FO95754 770 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 PEX11BO96011 259 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 ATP6V1B1P15313 513 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 FPR1P21462 350 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 ARNTP27540 789 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 CAPGP40121 348 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 NFE2L1Q14494 772 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 UNC50Q53HI1 259 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 FGD3Q5JSP0 725 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 MFSD4BQ5TF39 518 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 B3GNT6Q6ZMB0 384 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 ZDHHC21Q8IVQ6 265 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 COX18Q8N8Q8 333 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 ANKRD49Q8WVL7 239 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 PDE7BQ9NP56 450 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 THAP10Q9P2Z0 257 aaPredicted RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 KLHL3Q9UH77 587 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 EGFL7Q9UHF1 273 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 ITGB1BP2Q9UKP3 347 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 CCDC168Q8NDH2 2452 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 NDUFS4O43181 175 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 SRFP11831 508 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 TIE1P35590 1138 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 PLA2G16P53816 162 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 NRG3P56975 720 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 GRM7Q14831 915 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 AGERQ15109 404 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 PDK3Q15120 406 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 SLC9B1Q4ZJI4 515 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 SPANXN4Q5MJ08 99 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 MEDAGQ5VYS4 303 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 PPP4R4Q6NUP7 873 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 C11orf96Q7Z7L8 435 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 TSPYL5Q86VY4 417 aaPredicted RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 LIX1Q8N485 282 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 NETO2Q8NC67 525 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 SUN3Q8TAQ9 357 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 CXorf56Q9H5V9 222 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 IKZF3Q9UKT9 509 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 DLGAP4Q9Y2H0 992 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 NUP210Q8TEM1 1887 aaPredicted RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 NYNRINQ9P2P1 1898 aaKnown RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 C4BPBP20851 252 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 GPLD1P80108 840 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 BNC1Q01954 994 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 DGUOKQ16854 277 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 PRAMEF8Q5VWM4 474 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 PRAMEF7Q5VXH5 474 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 REP15Q6BDI9 236 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 TMEM214Q6NUQ4 689 aaKnown RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 SLC43A2Q8N370 569 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 PYURFQ96I23 114 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 TUBA1CQ9BQE3 449 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 POFUT2Q9Y2G5 429 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 TRIOO75962 3097 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 A0A1W2PP55 124 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 A0A1W2PQU0 124 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 EFCAB10A6NFE3 127 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 CXCR6O00574 342 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 AREL1O15033 823 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 UQCRC2P22695 453 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 CCR7P32248 378 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms