RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 PLD3Q8IV08 490 aa12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 ULK2Q8IYT8 1036 aa12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 FAM109AQ8N4B1 249 aa12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 TNIP2Q8NFZ5 429 aa12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 IGFBPL1Q8WX77 278 aa12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 SARAFQ96BY9 339 aa12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 LRRC46Q96FV0 321 aa12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 DACH2Q96NX9 599 aa12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 PANX2Q96RD6 677 aa12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 GSX2Q9BZM3 304 aa12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 ZNF223Q9UK11 482 aaPredicted RBP12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 ACAD8Q9UKU7 415 aa12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 DSCAMO60469 2012 aa12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 USF3Q68DE3 2245 aa12.69□□□□□ -0.38
VCPKMT-201ENST00000395859 ROS1P08922 2347 aa12.68□□□□□ -0.38
VCPKMT-201ENST00000395859 IGKV3D-11A0A0A0MRZ8 115 aa12.68□□□□□ -0.38
VCPKMT-201ENST00000395859 SLC16A5O15375 505 aa12.68□□□□□ -0.38
VCPKMT-201ENST00000395859 RDH16O75452 317 aa12.68□□□□□ -0.38
VCPKMT-201ENST00000395859 SIX3O95343 332 aaPredicted RBP12.68□□□□□ -0.38
VCPKMT-201ENST00000395859 STATHP02808 62 aa12.68□□□□□ -0.38
VCPKMT-201ENST00000395859 APOA4P06727 396 aa12.68□□□□□ -0.38
VCPKMT-201ENST00000395859 ZNF136P52737 540 aa12.68□□□□□ -0.38
VCPKMT-201ENST00000395859 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.68□□□□□ -0.38
VCPKMT-201ENST00000395859 WLSQ5T9L3 541 aa12.68□□□□□ -0.38
VCPKMT-201ENST00000395859 KRT222Q8N1A0 295 aa12.68□□□□□ -0.38
VCPKMT-201ENST00000395859 RAB42Q8N4Z0 105 aa12.68□□□□□ -0.38
VCPKMT-201ENST00000395859 SPC24Q8NBT2 197 aa12.68□□□□□ -0.38
VCPKMT-201ENST00000395859 OR13J1Q8NGT2 312 aa12.68□□□□□ -0.38
VCPKMT-201ENST00000395859 SMPDL3AQ92484 453 aa12.68□□□□□ -0.38
VCPKMT-201ENST00000395859 P3H4Q92791 437 aa12.68□□□□□ -0.38
VCPKMT-201ENST00000395859 KIAA1191Q96A73 305 aa12.68□□□□□ -0.38
VCPKMT-201ENST00000395859 TM4SF19Q96DZ7 209 aa12.68□□□□□ -0.38
VCPKMT-201ENST00000395859 YIPF4Q9BSR8 244 aa12.68□□□□□ -0.38
VCPKMT-201ENST00000395859 PACSIN1Q9BY11 444 aa12.68□□□□□ -0.38
VCPKMT-201ENST00000395859 DEFB126Q9BYW3 111 aa12.68□□□□□ -0.38
VCPKMT-201ENST00000395859 KCMF1Q9P0J7 381 aa12.68□□□□□ -0.38
VCPKMT-201ENST00000395859 PPIEQ9UNP9 301 aaKnown RBP12.68□□□□□ -0.38
VCPKMT-201ENST00000395859 R3HDM2Q9Y2K5 976 aaKnown RBP12.68□□□□□ -0.38
VCPKMT-201ENST00000395859 MRFAP1Q9Y605 127 aa12.68□□□□□ -0.38
VCPKMT-201ENST00000395859 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.68□□□□□ -0.38
VCPKMT-201ENST00000395859 DUSP10Q9Y6W6 482 aa12.68□□□□□ -0.38
VCPKMT-201ENST00000395859 MGAM2Q2M2H8 2515 aa12.67□□□□□ -0.38
VCPKMT-201ENST00000395859 SIAH2O43255 324 aa12.67□□□□□ -0.38
VCPKMT-201ENST00000395859 KIF5CO60282 957 aa12.67□□□□□ -0.38
VCPKMT-201ENST00000395859 HCN1O60741 890 aa12.67□□□□□ -0.38
VCPKMT-201ENST00000395859 DNAJB6O75190 326 aa12.67□□□□□ -0.38
VCPKMT-201ENST00000395859 MATN4O95460 622 aa12.67□□□□□ -0.38
VCPKMT-201ENST00000395859 SERPING1P05155 500 aa12.67□□□□□ -0.38
VCPKMT-201ENST00000395859 FHP07954 510 aa12.67□□□□□ -0.38
VCPKMT-201ENST00000395859 H2AFZP0C0S5 128 aa12.67□□□□□ -0.38
VCPKMT-201ENST00000395859 PAX1P15863 534 aa12.67□□□□□ -0.38
VCPKMT-201ENST00000395859 TPH1P17752 444 aa12.67□□□□□ -0.38
VCPKMT-201ENST00000395859 TIMP3P35625 211 aa12.67□□□□□ -0.38
VCPKMT-201ENST00000395859 GPR143P51810 404 aa12.67□□□□□ -0.38
VCPKMT-201ENST00000395859 ZBED6P86452 979 aa12.67□□□□□ -0.38
VCPKMT-201ENST00000395859 PLGLB1Q02325 96 aa12.67□□□□□ -0.38
VCPKMT-201ENST00000395859 GBX1Q14549 363 aa12.67□□□□□ -0.38
VCPKMT-201ENST00000395859 SEMA3AQ14563 771 aa12.67□□□□□ -0.38
VCPKMT-201ENST00000395859 ANKRD20A2Q5SQ80 823 aa12.67□□□□□ -0.38
VCPKMT-201ENST00000395859 ANKRD20A1Q5TYW2 823 aa12.67□□□□□ -0.38
VCPKMT-201ENST00000395859 ANKRD20A3Q5VUR7 823 aa12.67□□□□□ -0.38
VCPKMT-201ENST00000395859 H2AFVQ71UI9 128 aa12.67□□□□□ -0.38
VCPKMT-201ENST00000395859 ZNF534Q76KX8 674 aa12.67□□□□□ -0.38
VCPKMT-201ENST00000395859 MAATS1Q7Z4T9 603 aa12.67□□□□□ -0.38
VCPKMT-201ENST00000395859 TMEM156Q8N614 296 aa12.67□□□□□ -0.38
VCPKMT-201ENST00000395859 MCOLN3Q8TDD5 553 aa12.67□□□□□ -0.38
VCPKMT-201ENST00000395859 PERPQ96FX8 193 aa12.67□□□□□ -0.38
VCPKMT-201ENST00000395859 PEX11GQ96HA9 241 aa12.67□□□□□ -0.38
VCPKMT-201ENST00000395859 MACROD1Q9BQ69 325 aa12.67□□□□□ -0.38
VCPKMT-201ENST00000395859 RBCK1Q9BYM8 510 aa12.67□□□□□ -0.38
VCPKMT-201ENST00000395859 IL1RL2Q9HB29 575 aa12.67□□□□□ -0.38
VCPKMT-201ENST00000395859 TAC3Q9UHF0 121 aa12.67□□□□□ -0.38
VCPKMT-201ENST00000395859 TCRBV16S1A1N1A0A5B0 115 aa12.66□□□□□ -0.38
VCPKMT-201ENST00000395859 GOLGA6L9A6NEM1 432 aa12.66□□□□□ -0.38
VCPKMT-201ENST00000395859 AKR1B15C9JRZ8 316 aaPredicted RBP12.66□□□□□ -0.38
VCPKMT-201ENST00000395859 F8W8V4 182 aa12.66□□□□□ -0.38
VCPKMT-201ENST00000395859 KIF2AO00139 706 aaPredicted RBP12.66□□□□□ -0.38
VCPKMT-201ENST00000395859 MYO1CO00159 1063 aa12.66□□□□□ -0.38
VCPKMT-201ENST00000395859 MAN2A2P49641 1150 aa12.66□□□□□ -0.38
VCPKMT-201ENST00000395859 MEF2AQ02078 507 aaPredicted RBP12.66□□□□□ -0.38
VCPKMT-201ENST00000395859 DMTNQ08495 405 aa12.66□□□□□ -0.38
VCPKMT-201ENST00000395859 POU6F1Q14863 301 aa12.66□□□□□ -0.38
VCPKMT-201ENST00000395859 ARHGAP19Q14CB8 494 aa12.66□□□□□ -0.38
VCPKMT-201ENST00000395859 GPALPP1Q8IXQ4 340 aa12.66□□□□□ -0.38
VCPKMT-201ENST00000395859 LRRC56Q8IYG6 542 aaPredicted RBP12.66□□□□□ -0.38
VCPKMT-201ENST00000395859 FBXW8Q8N3Y1 598 aa12.66□□□□□ -0.38
VCPKMT-201ENST00000395859 AFAP1L2Q8N4X5 818 aa12.66□□□□□ -0.38
VCPKMT-201ENST00000395859 OR5T3Q8NGG3 340 aa12.66□□□□□ -0.38
VCPKMT-201ENST00000395859 OR9A1PQ8NGU1 263 aa12.66□□□□□ -0.38
VCPKMT-201ENST00000395859 HAUS1Q96CS2 278 aa12.66□□□□□ -0.38
VCPKMT-201ENST00000395859 DDX56Q9NY93 547 aaKnown RBP12.66□□□□□ -0.38
VCPKMT-201ENST00000395859 CAPN11Q9UMQ6 739 aa12.66□□□□□ -0.38
VCPKMT-201ENST00000395859 PCDHA3Q9Y5H8 950 aa12.66□□□□□ -0.38
VCPKMT-201ENST00000395859 TENM1Q9UKZ4 2725 aa12.66□□□□□ -0.38
VCPKMT-201ENST00000395859 CR1P17927 2039 aa12.66□□□□□ -0.38
VCPKMT-201ENST00000395859 NCKAP5O14513 1909 aa12.65□□□□□ -0.38
VCPKMT-201ENST00000395859 hCG_1818297A0A087WSY0 165 aa12.65□□□□□ -0.38
VCPKMT-201ENST00000395859 PRKNO60260 465 aaPredicted RBP12.65□□□□□ -0.38
VCPKMT-201ENST00000395859 EPPINO95925 133 aa12.65□□□□□ -0.38
VCPKMT-201ENST00000395859 NID1P14543 1247 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms