RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 BTBD9Q96Q07 612 aa14.49□□□□□ -0.09
SCAF11-204ENST00000395454 WASH6PQ9NQA3 447 aa14.49□□□□□ -0.09
SCAF11-204ENST00000395454 SLC25A37Q9NYZ2 338 aa14.49□□□□□ -0.09
SCAF11-204ENST00000395454 CNOT11Q9UKZ1 510 aaKnown RBP14.49□□□□□ -0.09
SCAF11-204ENST00000395454 MAPRE3Q9UPY8 281 aa14.49□□□□□ -0.09
SCAF11-204ENST00000395454 ASCC3Q8N3C0 2202 aaKnown RBP14.48□□□□□ -0.09
SCAF11-204ENST00000395454 FAM186AA6NE01 2351 aa14.48□□□□□ -0.09
SCAF11-204ENST00000395454 TCRBV5S2A0A599 114 aa14.48□□□□□ -0.09
SCAF11-204ENST00000395454 A6NCN8 305 aa14.48□□□□□ -0.09
SCAF11-204ENST00000395454 CDX4O14627 284 aaPredicted RBP14.48□□□□□ -0.09
SCAF11-204ENST00000395454 PCDHGA12O60330 932 aa14.48□□□□□ -0.09
SCAF11-204ENST00000395454 ETHE1O95571 254 aa14.48□□□□□ -0.09
SCAF11-204ENST00000395454 GPIP06744 558 aa14.48□□□□□ -0.09
SCAF11-204ENST00000395454 RPSAP08865 295 aaKnown RBP14.48□□□□□ -0.09
SCAF11-204ENST00000395454 ALPPL2P10696 532 aa14.48□□□□□ -0.09
SCAF11-204ENST00000395454 TGM1P22735 817 aa14.48□□□□□ -0.09
SCAF11-204ENST00000395454 PIK3CBP42338 1070 aa14.48□□□□□ -0.09
SCAF11-204ENST00000395454 RAE1P78406 368 aaKnown RBP14.48□□□□□ -0.09
SCAF11-204ENST00000395454 CATSPEREQ5SY80 951 aa14.48□□□□□ -0.09
SCAF11-204ENST00000395454 PRAMEF13Q5VWM6 474 aa14.48□□□□□ -0.09
SCAF11-204ENST00000395454 DUS1LQ6P1R4 473 aaKnown RBP14.48□□□□□ -0.09
SCAF11-204ENST00000395454 IYDQ6PHW0 289 aa14.48□□□□□ -0.09
SCAF11-204ENST00000395454 CYP2R1Q6VVX0 501 aa14.48□□□□□ -0.09
SCAF11-204ENST00000395454 FAM129CQ86XR2 697 aa14.48□□□□□ -0.09
SCAF11-204ENST00000395454 PAPD5Q8NDF8 572 aaKnown RBP14.48□□□□□ -0.09
SCAF11-204ENST00000395454 OR8J2Q8NGG1 315 aa14.48□□□□□ -0.09
SCAF11-204ENST00000395454 PPM1MQ96MI6 270 aa14.48□□□□□ -0.09
SCAF11-204ENST00000395454 OR52E6Q96RD3 313 aa14.48□□□□□ -0.09
SCAF11-204ENST00000395454 INSM2Q96T92 566 aaPredicted RBP14.48□□□□□ -0.09
SCAF11-204ENST00000395454 MTERF1Q99551 399 aaKnown RBP14.48□□□□□ -0.09
SCAF11-204ENST00000395454 SH3GL1Q99961 368 aa14.48□□□□□ -0.09
SCAF11-204ENST00000395454 DUSP23Q9BVJ7 150 aa14.48□□□□□ -0.09
SCAF11-204ENST00000395454 TRIM8Q9BZR9 551 aa14.48□□□□□ -0.09
SCAF11-204ENST00000395454 PAIP1Q9H074 479 aaKnown RBP14.48□□□□□ -0.09
SCAF11-204ENST00000395454 TMEM9BQ9NQ34 198 aa14.48□□□□□ -0.09
SCAF11-204ENST00000395454 DNAAF2Q9NVR5 837 aaKnown RBP14.48□□□□□ -0.09
SCAF11-204ENST00000395454 NLGN3Q9NZ94 848 aa14.48□□□□□ -0.09
SCAF11-204ENST00000395454 ZNF839A8K0R7 811 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 GIMD1P0DJR0 217 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 GRIA3P42263 894 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 ACSM2AQ08AH3 577 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 SELPLGQ14242 412 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 SLBPQ14493 270 aaKnown RBP eCLIP14.47□□□□□ -0.09
SCAF11-204ENST00000395454 SUZ12Q15022 739 aaKnown RBP14.47□□□□□ -0.09
SCAF11-204ENST00000395454 SFT2D3Q587I9 215 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 RUNDC3AQ59EK9 446 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 C6orf132Q5T0Z8 1188 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 ACSM2BQ68CK6 577 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 ADNP2Q6IQ32 1131 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 KANSL1Q7Z3B3 1105 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 PROSER1Q86XN7 944 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 ADGRG5Q8IZF4 528 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 RNF175Q8N4F7 328 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 OR52E4Q8NGH9 312 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 CLHC1Q8NHS4 586 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 UBE2E3Q969T4 207 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 ZNF583Q96ND8 569 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 TSSK3Q96PN8 268 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 EFHD1Q9BUP0 239 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 PCBD2Q9H0N5 130 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 TRIT1Q9H3H1 467 aaKnown RBP14.47□□□□□ -0.09
SCAF11-204ENST00000395454 COPS7BQ9H9Q2 264 aaPredicted RBP14.47□□□□□ -0.09
SCAF11-204ENST00000395454 DMRT3Q9NQL9 472 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 MAGEL2Q9UJ55 1249 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 GMEB1Q9Y692 573 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 PTPRZ1P23471 2315 aaPredicted RBP14.47□□□□□ -0.09
SCAF11-204ENST00000395454 DHRS12A0PJE2 317 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 H0YJX3 145 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 SCN2BO60939 215 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 ZNF883P0CG24 379 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 UMPSP11172 480 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 HRH2P25021 359 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 S100A3P33764 101 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 ASMTP46597 345 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 SRSF11Q05519 484 aaKnown RBP14.47□□□□□ -0.09
SCAF11-204ENST00000395454 KRT33BQ14525 404 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 RPE65Q16518 533 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 IRGCQ6NXR0 463 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 TRIM48Q8IWZ4 208 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 EID2Q8N6I1 236 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 PHC3Q8NDX5 983 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 ABHD11Q8NFV4 315 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.47□□□□□ -0.099e-7■□□□□ 10.4
SCAF11-204ENST00000395454 SLC37A2Q8TED4 501 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 CANT1Q8WVQ1 401 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 CXorf40BQ96DE9 158 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 ITCHQ96J02 903 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 EGLN2Q96KS0 407 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 PITHD1Q9GZP4 211 aaPredicted RBP14.47□□□□□ -0.09
SCAF11-204ENST00000395454 RMND5AQ9H871 391 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 PELI2Q9HAT8 420 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 ZNF624Q9P2J8 865 aaPredicted RBP14.47□□□□□ -0.09
SCAF11-204ENST00000395454 EGFL7Q9UHF1 273 aa14.47□□□□□ -0.09
SCAF11-204ENST00000395454 HEATR5BQ9P2D3 2071 aa14.46□□□□□ -0.09
SCAF11-204ENST00000395454 KIR2DS5A0A0G2JLQ3 304 aa14.46□□□□□ -0.09
SCAF11-204ENST00000395454 A0A0G2JNG1 304 aa14.46□□□□□ -0.09
SCAF11-204ENST00000395454 OR5K4A6NMS3 321 aa14.46□□□□□ -0.09
SCAF11-204ENST00000395454 KIR2DS3K7RE56 304 aa14.46□□□□□ -0.09
SCAF11-204ENST00000395454 GDF9O60383 454 aa14.46□□□□□ -0.09
SCAF11-204ENST00000395454 MTHFD1P11586 935 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms