RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 PCDHGA11Q9Y5H2 935 aa8.1□□□□□ -1.11
HERC4-203ENST00000395185 B3GALT1Q9Y5Z6 326 aa8.1□□□□□ -1.11
HERC4-203ENST00000395185 TMEM131Q92545 1883 aa8.1□□□□□ -1.11
HERC4-203ENST00000395185 TDRD6O60522 2096 aaKnown RBP8.09□□□□□ -1.11
HERC4-203ENST00000395185 A0A0G2JND7 137 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 TRBC2A0A5B9 178 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 PIPSLA2A3N6 862 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 PMS2P1A4D2B8 440 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 H7BY64 318 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 PIP5K1BO14986 540 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 KRT6AP02538 564 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 KRT6BP04259 564 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 CDH1P12830 882 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 UGT2B7P16662 529 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 CXCR2P25025 360 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 PSMB5P28074 263 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 GRIA3P42263 894 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 SCTRP47872 440 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 KRT6CP48668 564 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 MMP16P51512 607 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 NEK2P51955 445 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 IRX1P78414 480 aaPredicted RBP8.09□□□□□ -1.11
HERC4-203ENST00000395185 CLN3Q13286 438 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 SLBPQ14493 270 aaKnown RBP eCLIP8.09□□□□□ -1.11
HERC4-203ENST00000395185 ABRAXAS2Q15018 415 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 ZIC1Q15915 447 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 CPSF6Q16630 551 aaKnown RBP eCLIP8.09□□□□□ -1.11
HERC4-203ENST00000395185 LSM12Q3MHD2 195 aaKnown RBP8.09□□□□□ -1.11
HERC4-203ENST00000395185 GALNTL6Q49A17 601 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 PAGE2BQ5JRK9 111 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 KIAA1614Q5VZ46 1190 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 MED27Q6P2C8 311 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 CACNA2D3Q8IZS8 1091 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 NLGN4XQ8N0W4 816 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 AFAP1L2Q8N4X5 818 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 ESX1Q8N693 406 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 GBP7Q8N8V2 638 aaPredicted RBP8.09□□□□□ -1.11
HERC4-203ENST00000395185 ZNF740Q8NDX6 193 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 NLGN4YQ8NFZ3 816 aaPredicted RBP8.09□□□□□ -1.11
HERC4-203ENST00000395185 CEP70Q8NHQ1 597 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 AGR3Q8TD06 166 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 CREB3L4Q8TEY5 395 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 UBE2E3Q969T4 207 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 C19orf60Q96EN9 201 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 THOC1Q96FV9 657 aaKnown RBP8.09□□□□□ -1.11
HERC4-203ENST00000395185 PRAP1Q96NZ9 151 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 MAP3K3Q99759 626 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 CTRCQ99895 268 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 SLC7A5P2Q9GIP4 190 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 AKTIPQ9H8T0 292 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 BRF2Q9HAW0 419 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 TCF7L2Q9NQB0 619 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 PFDN4Q9NQP4 134 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 SAR1AQ9NR31 198 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 FARSBQ9NSD9 589 aaKnown RBP8.09□□□□□ -1.11
HERC4-203ENST00000395185 SOHLH2Q9NX45 425 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 HEY2Q9UBP5 337 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 ADGRE2Q9UHX3 823 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 POMT2Q9UKY4 750 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 PADI1Q9ULC6 663 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 SNX6Q9UNH7 406 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 PTGDR2Q9Y5Y4 395 aa8.09□□□□□ -1.11
HERC4-203ENST00000395185 CHD8Q9HCK8 2581 aa8.09□□□□□ -1.12
HERC4-203ENST00000395185 IGHV5-51A0A0C4DH38 117 aa8.08□□□□□ -1.12
HERC4-203ENST00000395185 TEX51A0A1B0GUA7 166 aa8.08□□□□□ -1.12
HERC4-203ENST00000395185 SLC9B1P1A6NJY1 282 aa8.08□□□□□ -1.12
HERC4-203ENST00000395185 CCT8L1PA6NM43 557 aa8.08□□□□□ -1.12
HERC4-203ENST00000395185 CAPN14A8MX76 684 aa8.08□□□□□ -1.12
HERC4-203ENST00000395185 ISM1B1AKI9 464 aa8.08□□□□□ -1.12
HERC4-203ENST00000395185 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.08□□□□□ -1.12
HERC4-203ENST00000395185 SLC28A1O00337 649 aa8.08□□□□□ -1.12
HERC4-203ENST00000395185 FFAR3O14843 346 aa8.08□□□□□ -1.12
HERC4-203ENST00000395185 LSM1O15116 133 aaKnown RBP8.08□□□□□ -1.12
HERC4-203ENST00000395185 GPR42O15529 346 aa8.08□□□□□ -1.12
HERC4-203ENST00000395185 KIF1CO43896 1103 aaKnown RBP8.08□□□□□ -1.12
HERC4-203ENST00000395185 LCMT2O60294 686 aaKnown RBP8.08□□□□□ -1.12
HERC4-203ENST00000395185 RAD1O60671 282 aa8.08□□□□□ -1.12
HERC4-203ENST00000395185 DIAPH2O60879 1101 aa8.08□□□□□ -1.12
HERC4-203ENST00000395185 STK17BO94768 372 aa8.08□□□□□ -1.12
HERC4-203ENST00000395185 KLHL18O94889 574 aa8.08□□□□□ -1.12
HERC4-203ENST00000395185 CCNDBP1O95273 360 aa8.08□□□□□ -1.12
HERC4-203ENST00000395185 CHEK2O96017 543 aa8.08□□□□□ -1.12
HERC4-203ENST00000395185 PDYNP01213 254 aa8.08□□□□□ -1.12
HERC4-203ENST00000395185 KLK3P07288 261 aaPredicted RBP8.08□□□□□ -1.12
HERC4-203ENST00000395185 SERPINA6P08185 405 aa8.08□□□□□ -1.12
HERC4-203ENST00000395185 LINC00032P0C843 101 aa8.08□□□□□ -1.12
HERC4-203ENST00000395185 FGF5P12034 268 aa8.08□□□□□ -1.12
HERC4-203ENST00000395185 ACPPP15309 386 aa8.08□□□□□ -1.12
HERC4-203ENST00000395185 GSTM2P28161 218 aa8.08□□□□□ -1.12
HERC4-203ENST00000395185 EPHA3P29320 983 aa8.08□□□□□ -1.12
HERC4-203ENST00000395185 CMPK1P30085 196 aa8.08□□□□□ -1.12
HERC4-203ENST00000395185 ADSLP30566 484 aaPredicted RBP8.08□□□□□ -1.12
HERC4-203ENST00000395185 SERPINB1P30740 379 aa8.08□□□□□ -1.12
HERC4-203ENST00000395185 AHRP35869 848 aa8.08□□□□□ -1.12
HERC4-203ENST00000395185 GABRA4P48169 554 aa8.08□□□□□ -1.12
HERC4-203ENST00000395185 ARFIP1P53367 373 aa8.08□□□□□ -1.12
HERC4-203ENST00000395185 MC1RQ01726 317 aa8.08□□□□□ -1.12
HERC4-203ENST00000395185 RHDQ02161 417 aa8.08□□□□□ -1.12
HERC4-203ENST00000395185 EMX2Q04743 252 aa8.08□□□□□ -1.12
HERC4-203ENST00000395185 TBL3Q12788 808 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms