RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 TBC1D19Q8N5T2 526 aa15.27■□□□□ 0.03
SMARCD1-202ENST00000394963 C11orf65Q8NCR3 313 aa15.27■□□□□ 0.03
SMARCD1-202ENST00000394963 MAGEB10Q96LZ2 347 aaPredicted RBP15.27■□□□□ 0.03
SMARCD1-202ENST00000394963 RDH14Q9HBH5 336 aa15.27■□□□□ 0.03
SMARCD1-202ENST00000394963 STARD5Q9NSY2 213 aa15.27■□□□□ 0.03
SMARCD1-202ENST00000394963 BPTFQ12830 3046 aa15.26■□□□□ 0.03
SMARCD1-202ENST00000394963 M0R129 80 aa15.26■□□□□ 0.03
SMARCD1-202ENST00000394963 TIA1P31483 386 aaKnown RBP eCLIP15.26■□□□□ 0.03
SMARCD1-202ENST00000394963 CCR8P51685 355 aa15.26■□□□□ 0.03
SMARCD1-202ENST00000394963 UGT8Q16880 541 aa15.26■□□□□ 0.03
SMARCD1-202ENST00000394963 RPS26P11Q5JNZ5 115 aaPredicted RBP15.26■□□□□ 0.03
SMARCD1-202ENST00000394963 NXPE4Q6UWF7 544 aa15.26■□□□□ 0.03
SMARCD1-202ENST00000394963 CEACAM20Q6UY09 585 aa15.26■□□□□ 0.03
SMARCD1-202ENST00000394963 ARSGQ96EG1 525 aa15.26■□□□□ 0.03
SMARCD1-202ENST00000394963 NRBF2Q96F24 287 aa15.26■□□□□ 0.03
SMARCD1-202ENST00000394963 KCNC2Q96PR1 638 aa15.26■□□□□ 0.03
SMARCD1-202ENST00000394963 INSM2Q96T92 566 aaPredicted RBP15.26■□□□□ 0.03
SMARCD1-202ENST00000394963 PHOX2BQ99453 314 aa15.26■□□□□ 0.03
SMARCD1-202ENST00000394963 KCNK12Q9HB15 430 aa15.26■□□□□ 0.03
SMARCD1-202ENST00000394963 EXOSC4Q9NPD3 245 aaKnown RBP15.26■□□□□ 0.03
SMARCD1-202ENST00000394963 CNOT1A5YKK6 2376 aaKnown RBP15.26■□□□□ 0.03
SMARCD1-202ENST00000394963 ZFC3H1O60293 1989 aaKnown RBP15.26■□□□□ 0.03
SMARCD1-202ENST00000394963 SPAG17Q6Q759 2223 aa15.26■□□□□ 0.03
SMARCD1-202ENST00000394963 KLK8O60259 260 aa15.26■□□□□ 0.03
SMARCD1-202ENST00000394963 ASMTP46597 345 aa15.26■□□□□ 0.03
SMARCD1-202ENST00000394963 BTN3A2P78410 334 aa15.26■□□□□ 0.03
SMARCD1-202ENST00000394963 MYBPC1Q00872 1141 aa15.26■□□□□ 0.03
SMARCD1-202ENST00000394963 SP140Q13342 867 aa15.26■□□□□ 0.03
SMARCD1-202ENST00000394963 LASP1Q14847 261 aaKnown RBP15.26■□□□□ 0.03
SMARCD1-202ENST00000394963 ZNF750Q32MQ0 723 aa15.26■□□□□ 0.03
SMARCD1-202ENST00000394963 PYCR3Q53H96 274 aa15.26■□□□□ 0.03
SMARCD1-202ENST00000394963 SYCE2Q6PIF2 218 aa15.26■□□□□ 0.03
SMARCD1-202ENST00000394963 BRINP2Q9C0B6 783 aa15.26■□□□□ 0.03
SMARCD1-202ENST00000394963 TCRBV3S1A0A5B6 114 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 SDC3O75056 442 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 SLCO2B1O94956 709 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 H6PDO95479 791 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 ARSFP54793 590 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 HBA1P69905 142 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 MADCAM1Q13477 382 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 CNPY1Q3B7I2 92 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 ZNF547Q8IVP9 402 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 PHF10Q8WUB8 498 aaKnown RBP15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 SMPDL3AQ92484 453 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 UBE2E3Q969T4 207 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 NACC2Q96BF6 587 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 ENTPD4Q9Y227 616 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 DYTNA2CJ06 578 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 FAM20BO75063 409 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 FABP3P05413 133 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 PPP2CBP62714 309 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 RPS21P63220 83 aaKnown RBP15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 PPP2CAP67775 309 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 HYAL1Q12794 435 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 DEFB134Q4QY38 66 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 CNIH3Q8TBE1 160 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 TMEM168Q9H0V1 697 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 C3orf18Q9UK00 162 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 BTN3A3O00478 584 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 HOXC11O43248 304 aaPredicted RBP15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 EFEMP2O95967 443 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 CXCR2P25025 360 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 NCBP2P52298 156 aaKnown RBP eCLIP15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 HPCAP84074 193 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 KCNAB2Q13303 367 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 PRRT3Q5FWE3 981 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 LCN8Q6JVE9 175 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 TRIM40Q6P9F5 258 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 PDXPQ96GD0 296 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 COL21A1Q96P44 957 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 GIMAP4Q9NUV9 329 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 SLC27A6Q9Y2P4 619 aa15.25■□□□□ 0.03
SMARCD1-202ENST00000394963 GFYI3L273 518 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 PRAMEF10O60809 474 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 ZNF26P17031 533 aaPredicted RBP15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 HOXA9P31269 272 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 RRM2P31350 389 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 SLC16A1P53985 500 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 ILF3Q12906 894 aaKnown RBP eCLIP15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 ANXA8L1Q5VT79 327 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 Q6ZPB1 254 aaPredicted RBP15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 PAGE2Q7Z2X7 111 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 OOSP2Q86WS3 158 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 ZNF540Q8NDQ6 660 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 PIK3C3Q8NEB9 887 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 KAT2AQ92830 837 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 KCNH6Q9H252 994 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 CLMPQ9H6B4 373 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 FGF22Q9HCT0 170 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 SAMD4AQ9UPU9 718 aaKnown RBP15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 OR10H3O60404 316 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 SCELO95171 688 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 HOXB3P14651 431 aaPredicted RBP15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 HTR1EP28566 365 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 ATP6V1E1P36543 226 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 EPHA5P54756 1037 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 DAG1Q14118 895 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 DNAJC5GQ8N7S2 189 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 OR5D16Q8NGK9 328 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 PROX1Q92786 737 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms