RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 PANX1Q96RD7 426 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 KLHL25Q9H0H3 589 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 DUSP15Q9H1R2 295 aaPredicted RBP8.26□□□□□ -1.09
TDP1-203ENST00000393454 REEP4Q9H6H4 257 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 DLGAP2Q9P1A6 1054 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 STX18Q9P2W9 335 aaKnown RBP8.26□□□□□ -1.09
TDP1-203ENST00000393454 STOML1Q9UBI4 398 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 PCDHB14Q9Y5E9 798 aa8.26□□□□□ -1.09
TDP1-203ENST00000393454 CAPN5O15484 640 aaPredicted RBP8.25□□□□□ -1.09
TDP1-203ENST00000393454 AQP9O43315 295 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 LAMTOR5O43504 91 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 ANXA6P08133 673 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 IL3P08700 152 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 PIM1P11309 404 aaPredicted RBP8.25□□□□□ -1.09
TDP1-203ENST00000393454 TYRP1P17643 537 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 MAGP20916 626 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 TPP2P29144 1249 aaPredicted RBP8.25□□□□□ -1.09
TDP1-203ENST00000393454 BSGP35613 385 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 AHRP35869 848 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 RPL3P39023 403 aaKnown RBP8.25□□□□□ -1.09
TDP1-203ENST00000393454 CDKN2CP42773 168 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 SSR2P43308 183 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 AFF3P51826 1226 aaKnown RBP8.25□□□□□ -1.09
TDP1-203ENST00000393454 MAPK12P53778 367 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 C21orf58P58505 322 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 HNRNPKP61978 463 aaKnown RBP eCLIP8.25□□□□□ -1.09
TDP1-203ENST00000393454 BNIP2Q12982 314 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 DUOXA1Q1HG43 343 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 DEFB133Q30KQ1 61 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 SPATS1Q496A3 300 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 GTDC1Q4AE62 458 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 RUNDC3AQ59EK9 446 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 TOR1AIP1Q5JTV8 583 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 ANXA8L1Q5VT79 327 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 ZNF425Q6IV72 752 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 ZNF621Q6ZSS3 439 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 MSANTD1Q6ZTZ1 278 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 R3HCC1LQ7Z5L2 792 aaKnown RBP8.25□□□□□ -1.09
TDP1-203ENST00000393454 PAQR7Q86WK9 346 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 NUDT13Q86X67 352 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 RBM12BQ8IXT5 1001 aaKnown RBP8.25□□□□□ -1.09
TDP1-203ENST00000393454 TRPV3Q8NET8 790 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 OR8J3Q8NGG0 315 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 OR8J2Q8NGG1 315 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 DNAJB8Q8NHS0 232 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 C1orf216Q8TAB5 229 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 DNASE2BQ8WZ79 361 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 MIEF2Q96C03 454 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 PPCDCQ96CD2 204 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 SH3GL1Q99961 368 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 C17orf62Q9BQA9 187 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 TACO1Q9BSH4 297 aaKnown RBP8.25□□□□□ -1.09
TDP1-203ENST00000393454 TRIM15Q9C019 465 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 PAIP1Q9H074 479 aaKnown RBP8.25□□□□□ -1.09
TDP1-203ENST00000393454 KLHL31Q9H511 634 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 MYNNQ9NPC7 610 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 SERHLQ9NQF3 203 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 MIEF1Q9NQG6 463 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 FAM120CQ9NX05 1096 aaKnown RBP8.25□□□□□ -1.09
TDP1-203ENST00000393454 MAN2B2Q9Y2E5 1009 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 BTBD3Q9Y2F9 522 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 AP1M2Q9Y6Q5 423 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 MDC1Q14676 2089 aaKnown RBP8.25□□□□□ -1.09
TDP1-203ENST00000393454 A0A0J9YVX5 310 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 PRSS51A0A1B0GVH4 220 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 FAM221BA6H8Z2 402 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 LRIT2A6NDA9 550 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 VILLO15195 856 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 KLHL18O94889 574 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 NCK1P16333 377 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 TRPC1P48995 793 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 ALDH9A1P49189 494 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 RPS15AP62244 130 aaKnown RBP8.25□□□□□ -1.09
TDP1-203ENST00000393454 CSTF1Q05048 431 aaKnown RBP8.25□□□□□ -1.09
TDP1-203ENST00000393454 SRSF5Q13243 272 aaKnown RBP8.25□□□□□ -1.09
TDP1-203ENST00000393454 TEAD4Q15561 434 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 ZIC1Q15915 447 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 TMEM35AQ53FP2 167 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 OR4C11Q6IEV9 310 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 FAM71E1Q6IPT2 247 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 FIGLAQ6QHK4 219 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 SPESP1Q6UW49 350 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 MAMSTRQ6ZN01 415 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 OOSP2Q86WS3 158 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 MSRB3Q8IXL7 192 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 CLECL1Q8IZS7 167 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 ARL14Q8N4G2 192 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 ZNF548Q8NEK5 533 aaPredicted RBP8.25□□□□□ -1.09
TDP1-203ENST00000393454 OR10A6Q8NH74 314 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 FLVCR1-AS1Q8TAF5 88 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 EDAQ92838 391 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 AURKBQ96GD4 344 aaPredicted RBP8.25□□□□□ -1.09
TDP1-203ENST00000393454 FCRL4Q96PJ5 515 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 SLC6A13Q9NSD5 602 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 ATAD3AQ9NVI7 634 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 SLC25A37Q9NYZ2 338 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 ATP6V1HQ9UI12 483 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 USP22Q9UPT9 525 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 PCDHGA4Q9Y5G9 962 aa8.25□□□□□ -1.09
TDP1-203ENST00000393454 PCDHGA2Q9Y5H1 932 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms