RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 CXCL6P80162 114 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 PAX2Q02962 417 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 CXCL9Q07325 125 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 RASGEF1BQ0VAM2 473 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 OVGP1Q12889 678 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 BIRC2Q13490 618 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 MAMLD1Q13495 774 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 CNPY1Q3B7I2 92 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 VWA2Q5GFL6 755 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 SPANXN4Q5MJ08 99 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 SNX30Q5VWJ9 437 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 OTPQ5XKR4 325 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 REP15Q6BDI9 236 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 FAAH2Q6GMR7 532 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 TMEM211Q6ICI0 200 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 Q71RC1 249 aaPredicted RBP0.29□□□□□ -2.36
SNORD28-201ENST00000384706 PXKQ7Z7A4 578 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 LRP11Q86VZ4 500 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 TGIF2LYQ8IUE0 185 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 SLC22A18ASQ8N1D0 253 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 LYPD1Q8N2G4 141 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 NME8Q8N427 588 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 C1orf131Q8NDD1 294 aaKnown RBP0.29□□□□□ -2.36
SNORD28-201ENST00000384706 MCUQ8NE86 351 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 TBCKQ8TEA7 893 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 SETD7Q8WTS6 366 aaKnown RBP0.29□□□□□ -2.36
SNORD28-201ENST00000384706 SCFD2Q8WU76 684 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 PCNPQ8WW12 178 aaKnown RBP0.29□□□□□ -2.36
SNORD28-201ENST00000384706 CASP10Q92851 521 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 NXNL1Q96CM4 212 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 FAM122AQ96E09 287 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 C16orf74Q96GX8 76 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 IMMP1LQ96LU5 166 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 TECTBQ96PL2 329 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 ALKBH3Q96Q83 286 aaPredicted RBP0.29□□□□□ -2.36
SNORD28-201ENST00000384706 SERINC2Q96SA4 455 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 CCT8L2Q96SF2 557 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 PAFAH2Q99487 392 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 SEPHS2Q99611 448 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 BARD1Q99728 777 aaKnown RBP0.29□□□□□ -2.36
SNORD28-201ENST00000384706 HSD17B14Q9BPX1 270 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 SLC2A11Q9BYW1 496 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 SLC25A39Q9BZJ4 359 aaPredicted RBP0.29□□□□□ -2.36
SNORD28-201ENST00000384706 ZBP1Q9H171 429 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 MMP27Q9H306 513 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 LIME1Q9H400 295 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 RIMS4Q9H426 269 aaPredicted RBP0.29□□□□□ -2.36
SNORD28-201ENST00000384706 SMARCAD1Q9H4L7 1026 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 Q9H8V8 135 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 JMJD4Q9H9V9 463 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 PLEKHA3Q9HB20 300 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 MYNNQ9NPC7 610 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 EQTNQ9NQ60 294 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 SH3GLB2Q9NR46 395 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 IRAK4Q9NWZ3 460 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 KLRF1Q9NZS2 232 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 THYN1Q9P016 225 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 IL36AQ9UHA7 158 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 NIP7Q9Y221 180 aaKnown RBP eCLIP0.29□□□□□ -2.368e-44■■■■■ 30.3
SNORD28-201ENST00000384706 CRYL1Q9Y2S2 319 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 FBXO7Q9Y3I1 522 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 LRRFIP2Q9Y608 721 aaKnown RBP0.29□□□□□ -2.36
SNORD28-201ENST00000384706 COMMD10Q9Y6G5 202 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 DGKBQ9Y6T7 804 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 COL1A2P08123 1366 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 ARHGAP23Q9P227 1491 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 KIR2DS1A0A191URI9 304 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 CCDC189A1A4V9 331 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 CASTOR2A6NHX0 329 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 NKX6-3A6NJ46 265 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 FOXI3A8MTJ6 420 aaPredicted RBP0.28□□□□□ -2.36
SNORD28-201ENST00000384706 A8MU76 341 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 B4DLN1 442 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 ANKRD63C9JTQ0 380 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 PRSS46E5RG02 174 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 EEF2KO00418 725 aaKnown RBP0.28□□□□□ -2.36
SNORD28-201ENST00000384706 E2F3O00716 465 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 FBP2O00757 339 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 CTDSP2O14595 271 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 AP3D1O14617 1153 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 NPHP1O15259 732 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 GPAA1O43292 621 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 EMC8O43402 210 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 ZNF324O75467 553 aaPredicted RBP0.28□□□□□ -2.36
SNORD28-201ENST00000384706 TOMM70O94826 608 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 TOXO94900 526 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 CD4P01730 458 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 IGHG3P01860 377 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 SERPING1P05155 500 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 SLC35E2P0CK97 266 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 SKILP12757 684 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 RPS2P15880 293 aaKnown RBP0.28□□□□□ -2.36
SNORD28-201ENST00000384706 PFKFB1P16118 471 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 ZNF823P16415 610 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 AXLP30530 894 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 TNFRSF4P43489 277 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 MRPL12P52815 198 aaKnown RBP0.28□□□□□ -2.36
SNORD28-201ENST00000384706 CRYBA2P53672 197 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 PNLIPRP2P54317 469 aa0.28□□□□□ -2.36
SNORD28-201ENST00000384706 SLC12A3P55017 1021 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms