RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 ASPGQ86U10 573 aa25.59■■□□□ 1.69
MSX1-201ENST00000382723 RIMKLAQ8IXN7 391 aa25.59■■□□□ 1.69
MSX1-201ENST00000382723 MAP3K3Q99759 626 aa25.59■■□□□ 1.69
MSX1-201ENST00000382723 ZFYVE21Q9BQ24 234 aa25.59■■□□□ 1.69
MSX1-201ENST00000382723 MCM8Q9UJA3 840 aa25.59■■□□□ 1.69
MSX1-201ENST00000382723 LEF1Q9UJU2 399 aaPredicted RBP25.59■■□□□ 1.69
MSX1-201ENST00000382723 SLC9B1P1A6NJY1 282 aa25.58■■□□□ 1.69
MSX1-201ENST00000382723 KIF1CO43896 1103 aaKnown RBP25.58■■□□□ 1.69
MSX1-201ENST00000382723 SYPP08247 313 aa25.58■■□□□ 1.69
MSX1-201ENST00000382723 TPP2P29144 1249 aaPredicted RBP25.58■■□□□ 1.69
MSX1-201ENST00000382723 ASMTP46597 345 aa25.58■■□□□ 1.69
MSX1-201ENST00000382723 GFERP55789 205 aa25.58■■□□□ 1.69
MSX1-201ENST00000382723 TMEM35AQ53FP2 167 aa25.58■■□□□ 1.69
MSX1-201ENST00000382723 EFCAB3Q8N7B9 438 aa25.58■■□□□ 1.69
MSX1-201ENST00000382723 MS4A6EQ96DS6 147 aa25.58■■□□□ 1.69
MSX1-201ENST00000382723 TRAPPC9Q96Q05 1148 aa25.58■■□□□ 1.69
MSX1-201ENST00000382723 LHX9Q9NQ69 397 aa25.58■■□□□ 1.69
MSX1-201ENST00000382723 LOC105369274A0A096LPK9 316 aa25.57■■□□□ 1.68
MSX1-201ENST00000382723 LOC102723532A0A0G2JNH3 316 aa25.57■■□□□ 1.68
MSX1-201ENST00000382723 ARHGAP10A1A4S6 786 aa25.57■■□□□ 1.68
MSX1-201ENST00000382723 DYTNA2CJ06 578 aa25.57■■□□□ 1.68
MSX1-201ENST00000382723 TNFRSF10AO00220 468 aa25.57■■□□□ 1.68
MSX1-201ENST00000382723 ERI3O43414 337 aaKnown RBP25.57■■□□□ 1.68
MSX1-201ENST00000382723 SIGLEC6O43699 453 aa25.57■■□□□ 1.68
MSX1-201ENST00000382723 SH3BP5O60239 455 aa25.57■■□□□ 1.68
MSX1-201ENST00000382723 KLHL18O94889 574 aa25.57■■□□□ 1.68
MSX1-201ENST00000382723 IL6P05231 212 aa25.57■■□□□ 1.68
MSX1-201ENST00000382723 PGRP06401 933 aa25.57■■□□□ 1.68
MSX1-201ENST00000382723 PCSK2P16519 638 aa25.57■■□□□ 1.68
MSX1-201ENST00000382723 PI4KAP42356 2102 aa25.57■■□□□ 1.68
MSX1-201ENST00000382723 PLIN5Q00G26 463 aa25.57■■□□□ 1.68
MSX1-201ENST00000382723 TCEAL6Q6IPX3 200 aa25.57■■□□□ 1.68
MSX1-201ENST00000382723 PAGE2Q7Z2X7 111 aa25.57■■□□□ 1.68
MSX1-201ENST00000382723 DGLUCYQ7Z3D6 616 aa25.57■■□□□ 1.68
MSX1-201ENST00000382723 OR4N4Q8N0Y3 316 aa25.57■■□□□ 1.68
MSX1-201ENST00000382723 EID2Q8N6I1 236 aa25.57■■□□□ 1.68
MSX1-201ENST00000382723 C16orf78Q8WTQ4 265 aa25.57■■□□□ 1.68
MSX1-201ENST00000382723 TCEAL3Q969E4 200 aa25.57■■□□□ 1.68
MSX1-201ENST00000382723 NDE1Q9NXR1 346 aa25.57■■□□□ 1.68
MSX1-201ENST00000382723 KLHL3Q9UH77 587 aa25.57■■□□□ 1.68
MSX1-201ENST00000382723 IGHV1OR21-1A0A087WYE8 117 aa25.57■■□□□ 1.68
MSX1-201ENST00000382723 EPN2O95208 641 aa25.57■■□□□ 1.68
MSX1-201ENST00000382723 TAS2R50P59544 299 aa25.57■■□□□ 1.68
MSX1-201ENST00000382723 OR4C11Q6IEV9 310 aa25.57■■□□□ 1.68
MSX1-201ENST00000382723 ANKRD26P1Q6NSI1 321 aa25.57■■□□□ 1.68
MSX1-201ENST00000382723 PGAM4Q8N0Y7 254 aa25.57■■□□□ 1.68
MSX1-201ENST00000382723 C19orf47Q8N9M1 422 aaKnown RBP25.57■■□□□ 1.68
MSX1-201ENST00000382723 KCT2Q8NC54 265 aa25.57■■□□□ 1.68
MSX1-201ENST00000382723 OR7A2PQ8NGA2 310 aa25.57■■□□□ 1.68
MSX1-201ENST00000382723 TESCQ96BS2 214 aa25.57■■□□□ 1.68
MSX1-201ENST00000382723 SLC39A3Q9BRY0 314 aa25.57■■□□□ 1.68
MSX1-201ENST00000382723 FAM60AQ9NP50 221 aa25.57■■□□□ 1.68
MSX1-201ENST00000382723 RAB23Q9ULC3 237 aa25.57■■□□□ 1.68
MSX1-201ENST00000382723 C4orf51C9J302 202 aa25.56■■□□□ 1.68
MSX1-201ENST00000382723 EIF2S1P05198 315 aaKnown RBP25.56■■□□□ 1.68
MSX1-201ENST00000382723 COX7A2P14406 83 aa25.56■■□□□ 1.68
MSX1-201ENST00000382723 S100A3P33764 101 aa25.56■■□□□ 1.68
MSX1-201ENST00000382723 SSR2P43308 183 aa25.56■■□□□ 1.68
MSX1-201ENST00000382723 RGS1Q08116 209 aa25.56■■□□□ 1.68
MSX1-201ENST00000382723 NFYCQ13952 458 aa25.56■■□□□ 1.68
MSX1-201ENST00000382723 ADPRMQ3LIE5 342 aa25.56■■□□□ 1.68
MSX1-201ENST00000382723 COQ5Q5HYK3 327 aa25.56■■□□□ 1.68
MSX1-201ENST00000382723 ZC3H14Q6PJT7 736 aaKnown RBP25.56■■□□□ 1.68
MSX1-201ENST00000382723 RNF44Q7L0R7 432 aa25.56■■□□□ 1.68
MSX1-201ENST00000382723 NUDT13Q86X67 352 aa25.56■■□□□ 1.68
MSX1-201ENST00000382723 KMT2EQ8IZD2 1858 aa25.56■■□□□ 1.68
MSX1-201ENST00000382723 ARHGAP24Q8N264 748 aa25.56■■□□□ 1.68
MSX1-201ENST00000382723 TMEM132CQ8N3T6 1108 aa25.56■■□□□ 1.68
MSX1-201ENST00000382723 RERGQ96A58 199 aaPredicted RBP25.56■■□□□ 1.68
MSX1-201ENST00000382723 CCDC74AQ96AQ1 378 aa25.56■■□□□ 1.68
MSX1-201ENST00000382723 TEFMQ96QE5 360 aaKnown RBP25.56■■□□□ 1.68
MSX1-201ENST00000382723 OR52E6Q96RD3 313 aa25.56■■□□□ 1.68
MSX1-201ENST00000382723 H0YGG7 62 aa25.55■■□□□ 1.68
MSX1-201ENST00000382723 P2RX6O15547 441 aa25.55■■□□□ 1.68
MSX1-201ENST00000382723 B4GAT1O43505 415 aa25.55■■□□□ 1.68
MSX1-201ENST00000382723 PRMT3O60678 531 aa25.55■■□□□ 1.68
MSX1-201ENST00000382723 SLC35G6P0C7Q6 338 aa25.55■■□□□ 1.68
MSX1-201ENST00000382723 GPR3P46089 330 aa25.55■■□□□ 1.68
MSX1-201ENST00000382723 RAB8AP61006 207 aa25.55■■□□□ 1.68
MSX1-201ENST00000382723 ARF3P61204 181 aaPredicted RBP25.55■■□□□ 1.68
MSX1-201ENST00000382723 PSME3P61289 254 aa25.55■■□□□ 1.68
MSX1-201ENST00000382723 STXBP1P61764 594 aaKnown RBP25.55■■□□□ 1.68
MSX1-201ENST00000382723 NR0B2Q15466 257 aa25.55■■□□□ 1.68
MSX1-201ENST00000382723 UGT8Q16880 541 aa25.55■■□□□ 1.68
MSX1-201ENST00000382723 AMER3Q8N944 861 aa25.55■■□□□ 1.68
MSX1-201ENST00000382723 OR2L5Q8NG80 312 aa25.55■■□□□ 1.68
MSX1-201ENST00000382723 ROPN1LQ96C74 230 aa25.55■■□□□ 1.68
MSX1-201ENST00000382723 QRFPRQ96P65 431 aa25.55■■□□□ 1.68
MSX1-201ENST00000382723 SLC6A16Q9GZN6 736 aa25.55■■□□□ 1.68
MSX1-201ENST00000382723 C1GALT1Q9NS00 363 aa25.55■■□□□ 1.68
MSX1-201ENST00000382723 CROTQ9UKG9 612 aa25.55■■□□□ 1.68
MSX1-201ENST00000382723 ADAMTS9Q9P2N4 1935 aa25.55■■□□□ 1.68
MSX1-201ENST00000382723 A0A088AWK7 358 aa25.55■■□□□ 1.68
MSX1-201ENST00000382723 CPED1A4D0V7 1026 aa25.55■■□□□ 1.68
MSX1-201ENST00000382723 ENGP17813 658 aa25.55■■□□□ 1.68
MSX1-201ENST00000382723 HPCAL1P37235 193 aa25.55■■□□□ 1.68
MSX1-201ENST00000382723 MAPK12P53778 367 aa25.55■■□□□ 1.68
MSX1-201ENST00000382723 RELAQ04206 551 aa25.55■■□□□ 1.68
MSX1-201ENST00000382723 PWP1Q13610 501 aa25.55■■□□□ 1.68
MSX1-201ENST00000382723 COL9A2Q14055 689 aaPredicted RBP25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms