RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 DLGAP3O95886 979 aa12.04□□□□□ -0.48
SMN1-202ENST00000380707 B3GALT4O96024 378 aa12.04□□□□□ -0.48
SMN1-202ENST00000380707 KRT6AP02538 564 aa12.04□□□□□ -0.48
SMN1-202ENST00000380707 KRT6BP04259 564 aa12.04□□□□□ -0.48
SMN1-202ENST00000380707 ZNF888P0CJ79 500 aaPredicted RBP12.04□□□□□ -0.48
SMN1-202ENST00000380707 HMOX2P30519 316 aa12.04□□□□□ -0.48
SMN1-202ENST00000380707 RORAP35398 523 aa12.04□□□□□ -0.48
SMN1-202ENST00000380707 KRT6CP48668 564 aa12.04□□□□□ -0.48
SMN1-202ENST00000380707 HTR6P50406 440 aa12.04□□□□□ -0.48
SMN1-202ENST00000380707 ARSFP54793 590 aa12.04□□□□□ -0.48
SMN1-202ENST00000380707 ADPRMQ3LIE5 342 aa12.04□□□□□ -0.48
SMN1-202ENST00000380707 UGT3A2Q3SY77 523 aa12.04□□□□□ -0.48
SMN1-202ENST00000380707 TOR1AIP1Q5JTV8 583 aa12.04□□□□□ -0.48
SMN1-202ENST00000380707 C1orf189Q5VU69 101 aa12.04□□□□□ -0.48
SMN1-202ENST00000380707 YOD1Q5VVQ6 348 aaPredicted RBP12.04□□□□□ -0.48
SMN1-202ENST00000380707 GARNL3Q5VVW2 1013 aa12.04□□□□□ -0.48
SMN1-202ENST00000380707 KANK2Q63ZY3 851 aa12.04□□□□□ -0.48
SMN1-202ENST00000380707 ATG16L1Q676U5 607 aa12.04□□□□□ -0.48
SMN1-202ENST00000380707 PRSS41Q7RTY9 318 aa12.04□□□□□ -0.48
SMN1-202ENST00000380707 ZFAND4Q86XD8 727 aa12.04□□□□□ -0.48
SMN1-202ENST00000380707 TRIM42Q8IWZ5 723 aa12.04□□□□□ -0.48
SMN1-202ENST00000380707 METTL27Q8N6F8 245 aaPredicted RBP12.04□□□□□ -0.48
SMN1-202ENST00000380707 ZNF781Q8N8C0 355 aa12.04□□□□□ -0.48
SMN1-202ENST00000380707 GALNT6Q8NCL4 622 aa12.04□□□□□ -0.48
SMN1-202ENST00000380707 ZCCHC10Q8TBK6 192 aa12.04□□□□□ -0.48
SMN1-202ENST00000380707 UTP15Q8TED0 518 aaKnown RBP12.04□□□□□ -0.48
SMN1-202ENST00000380707 SELENOMQ8WWX9 145 aa12.04□□□□□ -0.48
SMN1-202ENST00000380707 MS4A6EQ96DS6 147 aa12.04□□□□□ -0.48
SMN1-202ENST00000380707 CMTM7Q96FZ5 175 aa12.04□□□□□ -0.48
SMN1-202ENST00000380707 SLC7A5P2Q9GIP4 190 aa12.04□□□□□ -0.48
SMN1-202ENST00000380707 REXO4Q9GZR2 422 aaKnown RBP12.04□□□□□ -0.48
SMN1-202ENST00000380707 OR51B5Q9H339 312 aa12.04□□□□□ -0.48
SMN1-202ENST00000380707 PRM3Q9NNZ6 103 aa12.04□□□□□ -0.48
SMN1-202ENST00000380707 THSD1Q9NS62 852 aa12.04□□□□□ -0.48
SMN1-202ENST00000380707 THAP1Q9NVV9 213 aa12.04□□□□□ -0.48
SMN1-202ENST00000380707 SRPK3Q9UPE1 567 aa12.04□□□□□ -0.48
SMN1-202ENST00000380707 FIS1Q9Y3D6 152 aa12.04□□□□□ -0.48
SMN1-202ENST00000380707 SDK2Q58EX2 2172 aa12.04□□□□□ -0.48
SMN1-202ENST00000380707 IGF2RP11717 2491 aa12.03□□□□□ -0.48
SMN1-202ENST00000380707 SEC16AO15027 2179 aa12.03□□□□□ -0.48
SMN1-202ENST00000380707 MEN1O00255 615 aa12.03□□□□□ -0.48
SMN1-202ENST00000380707 SAP18O00422 153 aaKnown RBP12.03□□□□□ -0.48
SMN1-202ENST00000380707 DSCR3O14972 297 aa12.03□□□□□ -0.48
SMN1-202ENST00000380707 FOXS1O43638 330 aa12.03□□□□□ -0.48
SMN1-202ENST00000380707 HBQ1P09105 142 aa12.03□□□□□ -0.48
SMN1-202ENST00000380707 SMIM10L1P0DMW3 83 aa12.03□□□□□ -0.48
SMN1-202ENST00000380707 ITGAXP20702 1163 aa12.03□□□□□ -0.48
SMN1-202ENST00000380707 PTX3P26022 381 aaPredicted RBP12.03□□□□□ -0.48
SMN1-202ENST00000380707 PLA2G16P53816 162 aa12.03□□□□□ -0.48
SMN1-202ENST00000380707 RAB8AP61006 207 aa12.03□□□□□ -0.48
SMN1-202ENST00000380707 STXBP1P61764 594 aaKnown RBP12.03□□□□□ -0.48
SMN1-202ENST00000380707 FAM53BQ14153 422 aa12.03□□□□□ -0.48
SMN1-202ENST00000380707 MUM1Q2TAK8 710 aa12.03□□□□□ -0.48
SMN1-202ENST00000380707 TBC1D25Q3MII6 688 aa12.03□□□□□ -0.48
SMN1-202ENST00000380707 C10orf62Q5T681 223 aaPredicted RBP12.03□□□□□ -0.48
SMN1-202ENST00000380707 DEPDC1Q5TB30 811 aa12.03□□□□□ -0.48
SMN1-202ENST00000380707 KHDRBS2Q5VWX1 349 aaKnown RBP12.03□□□□□ -0.48
SMN1-202ENST00000380707 ZNF385CQ66K41 422 aaPredicted RBP12.03□□□□□ -0.48
SMN1-202ENST00000380707 LCN10Q6JVE6 187 aa12.03□□□□□ -0.48
SMN1-202ENST00000380707 SCIMPQ6UWF3 145 aa12.03□□□□□ -0.48
SMN1-202ENST00000380707 UBE3DQ7Z6J8 389 aa12.03□□□□□ -0.48
SMN1-202ENST00000380707 PDSS2Q86YH6 399 aa12.03□□□□□ -0.48
SMN1-202ENST00000380707 DSELQ8IZU8 1212 aa12.03□□□□□ -0.48
SMN1-202ENST00000380707 CLYBLQ8N0X4 340 aa12.03□□□□□ -0.48
SMN1-202ENST00000380707 AFAP1L2Q8N4X5 818 aa12.03□□□□□ -0.48
SMN1-202ENST00000380707 ARFGAP2Q8N6H7 521 aa12.03□□□□□ -0.48
SMN1-202ENST00000380707 CKAP2Q8WWK9 683 aa12.03□□□□□ -0.48
SMN1-202ENST00000380707 GATA6Q92908 595 aa12.03□□□□□ -0.48
SMN1-202ENST00000380707 SMIM10Q96HG1 83 aa12.03□□□□□ -0.48
SMN1-202ENST00000380707 ZNF578Q96N58 590 aaPredicted RBP12.03□□□□□ -0.48
SMN1-202ENST00000380707 GBP5Q96PP8 586 aa12.03□□□□□ -0.48
SMN1-202ENST00000380707 ILKAPQ9H0C8 392 aaPredicted RBP12.03□□□□□ -0.48
SMN1-202ENST00000380707 TXLNGQ9NUQ3 528 aa12.03□□□□□ -0.48
SMN1-202ENST00000380707 PSD3Q9NYI0 1048 aa12.03□□□□□ -0.48
SMN1-202ENST00000380707 NDOR1Q9UHB4 597 aa12.03□□□□□ -0.48
SMN1-202ENST00000380707 ACSL6Q9UKU0 697 aa12.03□□□□□ -0.48
SMN1-202ENST00000380707 RAP2CQ9Y3L5 183 aa12.03□□□□□ -0.48
SMN1-202ENST00000380707 DNAJC15Q9Y5T4 150 aa12.03□□□□□ -0.48
SMN1-202ENST00000380707 SLC22A7Q9Y694 548 aa12.03□□□□□ -0.48
SMN1-202ENST00000380707 A0A0A6YYC8 382 aaPredicted RBP12.02□□□□□ -0.48
SMN1-202ENST00000380707 A0A1B0GX78 115 aa12.02□□□□□ -0.48
SMN1-202ENST00000380707 STMND1H3BQB6 276 aa12.02□□□□□ -0.48
SMN1-202ENST00000380707 I3L1I5 382 aaPredicted RBP12.02□□□□□ -0.48
SMN1-202ENST00000380707 ERI3O43414 337 aaKnown RBP12.02□□□□□ -0.48
SMN1-202ENST00000380707 SNUPNO95149 360 aaKnown RBP12.02□□□□□ -0.48
SMN1-202ENST00000380707 ALOX12P18054 663 aa12.02□□□□□ -0.48
SMN1-202ENST00000380707 IL1RNP18510 177 aa12.02□□□□□ -0.48
SMN1-202ENST00000380707 OR1D4P47884 311 aa12.02□□□□□ -0.48
SMN1-202ENST00000380707 PHEXP78562 749 aa12.02□□□□□ -0.48
SMN1-202ENST00000380707 OCRLQ01968 901 aa12.02□□□□□ -0.48
SMN1-202ENST00000380707 ABHD18Q0P651 414 aa12.02□□□□□ -0.48
SMN1-202ENST00000380707 HERC3Q15034 1050 aa12.02□□□□□ -0.48
SMN1-202ENST00000380707 NDUFA9Q16795 377 aa12.02□□□□□ -0.48
SMN1-202ENST00000380707 DEFB134Q4QY38 66 aa12.02□□□□□ -0.48
SMN1-202ENST00000380707 FAM199XQ6PEV8 388 aaPredicted RBP12.02□□□□□ -0.48
SMN1-202ENST00000380707 C6orf15Q6UXA7 325 aaPredicted RBP12.02□□□□□ -0.48
SMN1-202ENST00000380707 CHSY3Q70JA7 882 aa12.02□□□□□ -0.48
SMN1-202ENST00000380707 ABHD13Q7L211 337 aa12.02□□□□□ -0.48
SMN1-202ENST00000380707 OR2L5Q8NG80 312 aa12.02□□□□□ -0.48
SMN1-202ENST00000380707 OR9A4Q8NGU2 314 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms